Query= MSMg01no547_o02.b1 MSMg01no547_o02.b1 CHROMAT_FILE:
MSMg01no547_o02.b1 PHD_FILE: MSMg01no547_o02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:38 2005
(634 letters)
>mm_chr18_7164149_7165185
Length = 1037
Score = 1189 bits (615), Expect = 0.0
Identities = 626/631 (99%), Gaps = 3/631 (0%)
Strand = Plus / Plus
Query: 7 gaattctcaaccattctctaatggtcaacaagtacttaaagaaatgtttaatgtccttag 66
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctcaaccattccctaatggtcaacaagtacttaaagaaatgtttaatgtccttag 266
Query: 67 tcactagggaaatgcaaatcaaaatgatgcttgagattctatcatacacccatcagaatg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcactagggaaatgcaaatcaaaatgatgcttgagattctatcatacacccatcagaatg 326
Query: 127 attaatatcaaaaattcaagtggcagtgcatggtagcgagtatgtggaggtagagggaac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 attaatatcaaaaattcaagtggcagtgcatggtagcgagtatgtggaggtagagggaac 386
Query: 187 acctctccattgctggtggaatttcaatctaacataatcactgtggaaattaatctggtg 246
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 acccctccattgctggtggaatttcaatctaacataatcactgtggaaattaatctggtg 446
Query: 247 gtttttcagaaaactgggaatagttctaccccaagatgcagctataccactcctgggcat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtttttcagaaaactgggaatagttctaccccaagatgcagctataccactcctgggcat 506
Query: 307 atacccataagatgctccactatactacaaggacactagttcaactatgagccactattt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atacccataagatgctccactatactacaaggacactagttcaactatgagccactattt 566
Query: 367 ttggaggggctcttagtttagtcaaattaggaaagcatat---caacagaaattacaaac 423
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 567 ttggaggggctcttagtttagtcaaattaggaaagcatattatcaacagaaattacaaac 626
Query: 424 acctaaagttctaattatattagacattcattataatctcattttaaaaacataattatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 acctaaagttctaattatattagacattcattataatctcattttaaaaacataattatt 686
Query: 484 tgttacatatggatgtgtgtattcatctgtgtccatgacatgtatatgtaattgtttgat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgttacatatggatgtgtgtattcatctgtgtccatgacatgtatatgtaattgtttgat 746
Query: 544 ataccagaaataggatcaaatatcctggagctggaattacaagcttttgtgagctgccca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ataccagaaataggatcaaatatcctggagctggaattacaagcttttgtgagctgccca 806
Query: 604 atgtgggtgctaggaaccaaactttaatcct 634
|||||||||||||||||||||||||||||||
Sbjct: 807 atgtgggtgctaggaaccaaactttaatcct 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1037
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1027
Effective search space: 640848
Effective search space used: 640848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_o02.g1 MSMg01no547_o02.g1 CHROMAT_FILE:
MSMg01no547_o02.g1 PHD_FILE: MSMg01no547_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:38 2005
(655 letters)
>mm_chr18_7286121_7287174
Length = 1054
Score = 1232 bits (637), Expect = 0.0
Identities = 646/649 (99%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 7 aattcaaacaggcttgtccaaaggaagctgactgagagaaaccaaattaaggagaatttg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 aattcaaacaggcttgtccaaaggaagctgactgagagaaaccaaattaaggagaatttg 795
Query: 67 gtgggatttcttcatctttgtctttgttgcactggataatctttattgtttatgttgata 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gtgggatttcttcatctttgtctttgttgcactggataatctttattgtttatgttgata 735
Query: 127 ttttttcagcaaacagagaccctgtagtgaaaatcttgggtccagattataatgagatga 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ttttttcagcaaacagagaccctgtagtgaaaatcttgggtccagattataatgagatga 675
Query: 187 aagaagaccccactcgcttgactcttctcgatacgatcatcaaagataaagagacatata 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aagaagaccccactcgcttgactcttctcgatacgatcatcaaagataaagagacatata 615
Query: 247 tgaaaaggaaagtggccatcttgctgaagcagctggacctgcacctgctcaaccattccc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tgaaaaggaaagtggccatcttgctgaagcagctggacctgcacctgctcaaccattccc 555
Query: 307 taaagtacatttctctgtgagtgccagtgaagcatctcagatgcagccacaaaggtgctc 366
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 taaagtacatttctctgtgagtgccagtgaagcatctcagatgcagccacaaaggtgctt 495
Query: 367 gcagcatcttacaaagaaatacaagaaaaagcacaatagttactgctactgagttaatgg 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gcagcatcttacaaagaaatacaagaaaaagcacaatagttactgctactgagttaatgg 435
Query: 427 ttcaggctacaggaacagagcatccattctactggatttatttatacaagctctaacttt 486
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 434 ttcaggctacaggaacagagcatccattctactggatttatttatataagctctaacttt 375
Query: 487 agttattcttgctaacagtctaatgggggttttctccaggtcagaaggcattggacatgt 546
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agttatt-ttgctaacagtctaatgggggttttctccaggtcagaaggcattggacatgt 316
Query: 547 gactctctttgagactctttagataattatacatattaagtgatagcacaaatagaatgt 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gactctctttgagactctttagataattatacatattaagtgatagcacaaatagaatgt 256
Query: 607 agagtttgtgcagtacaaaatgtgctcatatttctagtattttctatgg 655
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agagtttgtgcagtacaaaatgtgctcatatttctagtattttctatgg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1054
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1044
Effective search space: 673380
Effective search space used: 673380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
