MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-548C02
Chromosome	18 (Build37)
Map Location	74,291,724 - 74,292,187
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Rkhd2, Smad4, Elac1, Me2, Mro, Mapk4
Downstream gene	2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, Dym
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rkhd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240396 MGI:2652843
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17128 MGI:894293
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elac1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114615 MGI:1890495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Me2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107029 MGI:2147351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mro (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71263 MGI:2152817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mapk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225724 MGI:2444559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810433K01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66468 MGI:1913718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cxxc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74322 MGI:1921572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435570 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435570 MGI:3644035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Mbd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17190 MGI:1333811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74453 MGI:1921703
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC628298 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628298
definition	note : fatty acid-binding protein, epidermal pseudogene pseudo : _no_value

name	LOC668124 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668124
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC668126 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668126
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Myo5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17919 MGI:106598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acaa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52538 MGI:1098623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672799 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672799
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Lipg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16891 MGI:1341803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319195 MGI:2448270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC031181 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:407819 MGI:3039614
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dym (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69190 MGI:1918480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rkhd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116174796 GeneID:240396 MGI:2652843
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger and KH domain containing 2 transcript_id : NM_001039214.3

name	Smad4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543223 GeneID:17128 MGI:894293
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 4 (Drosophila) transcript_id : NM_008540.2

name	Elac1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111074536 GeneID:114615 MGI:1890495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elaC homolog 1 (E. coli) transcript_id : NM_053255.3

name	Me2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130149 GeneID:107029 MGI:2147351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : malic enzyme 2, NAD(+)-dependent, mitochondrial transcript_id : NM_145494.2

name	Mro (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89274176 GeneID:71263 MGI:2152817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Maestro transcript_id : NM_027741.2

name	Mapk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89337267 GeneID:225724 MGI:2444559
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase 4 transcript_id : NM_172632.2

name	2810433K01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367006 GeneID:66468 MGI:1913718
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810433K01 gene transcript_id : NM_025581.3

name	Cxxc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803577 GeneID:74322 MGI:1921572
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CXXC finger 1 (PHD domain) transcript_id : NM_028868.2

name	Mbd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305258 GeneID:17190 MGI:1333811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyl-CpG binding domain protein 1 transcript_id : NM_013594.1

name	Ccdc11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116812880 GeneID:74453 MGI:1921703
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 11 transcript_id : NM_028948.1

name	Myo5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95113659 GeneID:17919 MGI:106598
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin Vb transcript_id : NM_201600.2

name	Acaa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366266 GeneID:52538 MGI:1098623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) transcript_id : NM_177470.3

name	Lipg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543122 GeneID:16891 MGI:1341803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipase, endothelial transcript_id : NM_010720.2

name	Rpl17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383739 GeneID:319195 MGI:2448270
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L17 transcript_id : NM_001002239.2

name	BC031181 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113679825 GeneID:407819 MGI:3039614
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC031181 transcript_id : NM_001001181.3

name	Dym (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130388 GeneID:69190 MGI:1918480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dymeclin transcript_id : NM_027727.2

name	Rkhd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115430061 GeneID:240396 MGI:2652843
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : ring finger and KH domain containing 2 protein_id : NP_001034303.2

name	Smad4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543224 CCDS:CCDS29337.1 GeneID:17128 MGI:894293
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0001822 - kidney development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0051098 - regulation of binding [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007184 - SMAD protein nuclear translocation [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001658 - ureteric bud branching [Evidence IGI] codon_start : 1 note : Smad 4 product : MAD homolog 4 protein_id : NP_032566.2

name	Elac1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981497 GeneID:114615 MGI:1890495
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004519 - endonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 product : elaC homolog 1 protein_id : NP_444485.2

name	Me2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703972 CCDS:CCDS29339.1 GeneID:107029 MGI:2147351
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA] codon_start : 1 product : malic enzyme 2, NAD(+)-dependent, mitochondrial protein_id : NP_663469.1

name	Mro (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89274177 GeneID:71263 MGI:2152817
definition	GO_component : GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : maestro protein_id : NP_082017.2

name	Mapk4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89337268 GeneID:225724 MGI:2444559
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 note : Erk3-related product : mitogen-activated protein kinase 4 protein_id : NP_766220.2

name	2810433K01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541928 CCDS:CCDS29341.1 GeneID:66468 MGI:1913718
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC66468 protein_id : NP_079857.2

name	Cxxc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18390325 GeneID:74322 MGI:1921572
definition	GO_component : GO:0016363 - nuclear matrix [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : CpG binding protein product : CXXC finger 1 (PHD domain) protein_id : NP_083144.1

name	Mbd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305259 GeneID:17190 MGI:1333811
definition	GO_component : GO:0000785 - chromatin [Evidence IDA]; GO:0000792 - heterochromatin [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006306 - DNA methylation [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : methyl-CpG binding domain protein 1 protein_id : NP_038622.1

name	Ccdc11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116812881 GeneID:74453 MGI:1921703
definition	codon_start : 1 product : coiled-coil domain containing 11 protein_id : NP_083224.1

name	Myo5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46399202 GeneID:17919 MGI:106598
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016459 - myosin [Evidence IEA] GO_function : GO:0003774 - motor activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 product : myosin Vb protein_id : NP_963894.1

name	Acaa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29126205 CCDS:CCDS29342.1 GeneID:52538 MGI:1098623
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 product : acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) protein_id : NP_803421.1

name	Lipg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543123 CCDS:CCDS29343.1 GeneID:16891 MGI:1341803
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004465 - lipoprotein lipase activity [Evidence IEA]; GO:0004806 - triacylglycerol lipase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : endothelial lipase; lipose, endothelial product : lipase, endothelial protein_id : NP_034850.2

name	Rpl17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50355690 CCDS:CCDS29344.1 GeneID:319195 MGI:2448270
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0015934 - large ribosomal subunit [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ribosomal protein L17 protein_id : NP_001002239.1

name	BC031181 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47564084 GeneID:407819 MGI:3039614
definition	codon_start : 1 product : hypothetical protein LOC407819 protein_id : NP_001001181.1

name	Dym (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25282389 CCDS:CCDS29346.1 GeneID:69190 MGI:1918480
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : dymeclin protein_id : NP_082003.1

name	EG435570 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435570
definition	number : 1 pseudo : _no_value

name	LOC668124 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668124
definition	number : 1 pseudo : _no_value

name	LOC668126 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668126
definition	number : 1 pseudo : _no_value

name	LOC672799 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672799
definition	number : 1 pseudo : _no_value

clone name	MSMg01-454F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093B04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-486E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122E03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-148M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339C06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-071P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-548C02.T7 (MSMg01no548_c02.b1)	MSMg01-548C02.TJ (MSMg01no548_c02.g1)
ACC	AG612552	AG612553
length	763	861
length of high quality (start - end)	469 (45 - 513)	---
definition	CHROMAT_FILE: MSMg01no548_c02.b1 PHD_FILE: MSMg01no548_c02.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:29:58 2005	CHROMAT_FILE: MSMg01no548_c02.g1 PHD_FILE: MSMg01no548_c02.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:29:58 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCCTAGGACATTCTGGTCAGCTAACTGGTCTCTGTTCTAGGGCATGGT CCTTGTCACTGTTGGGAGAAGGATCTTGGGGCATTGAAGGGCATGAAAGG GATGCAACCAGTGGGCATAGAGAAAAGCCTACTTCTGGTAGACGTCAACA CTTCAGAGATAAGCAAGCACAGAACTCCCTTCTGACGGAGCAAAAGTAAC CGATACGATGTGTGTGAACAGCCAGGAGGTGGTTAAGACAGGATGAGGAG AGAAAACAGAAGACAGAAGGGCCTGCGGGATGGACTTCCATCTGAGAATA ACTAGAGGTTGCCATGCCTATAGAAGATACAAGGAATGTATACTGGTATC TGTACCAAACAGATGTTTCTGGATATATACTAGATAACTAGTTATCTCTG GAGCTTAATGTTGGAGATTTTGAGGAGAACTTGTGGGAATCTCTCCTTCC ATGAGATCAATCTCAGGCCACCAGGCTTGGTAGCAAGTGCCTTTACCCAC AGGACCATCTCATCAGCTCATACATATTGTTTTGAAAGAATCTCTTTATG AATATGATGCAGACCCTGCTATGGGGAAATGTGGATGTGGGAAACTTAGG GGGCCCTACCCAAAAAGGATAAGCTCACTGGAAGGGTTATTTCTATGGGG ATAAATGGGCCCAGTAAAACCCAATAGGCTTAGATCCCCTTGGGAAAAAA TTTGTGAAGGGGG	TGGGGNTTTGCTGAAGGCNNNNAAGCATGGTGGGAGNNTGTGTGGGTGGG NNNTANANNTATAGTATCTATTATATTGTTATXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGTCCCCC CTTGGGTCTGGTTTTAATGCATGGAAAAATTCTTCCCTCCGAAATTTTGG GAAATTGCCAAAAAAAAAAATTTTTAAATCCACCCAAAGTCTCTTTTTGG AAACCTTTTTCTAAAAAACCCCTTTCTTTGGACCCGGGAAAAAAAACCCC CTCTTTTTCTTTTTTTTCTAAAAAAACCACAATGGGGGAAAAATGTTATG GTGGTTTTTCTCAAAAAAAAAAAAATGTTTTTTTTTATTGGGGGGAATCA CAAAAACCCGGGGGTGAAGAGGAAAAAAAAAAAAAACCCCGCCCTCCTTT TTTTTCTCTCCCCAAAGAGAAAAAAAATCCTGTTTGTGTTTTCTAAAAAT GTTTCTTCTTCAAAAAAACTACCCCCCTCATCAAATGAGGGATATTATTT TTTTTTTTTTTTTTTTTACGAATATATTAGTTCNCAATAAAAAAAATAAT AATTCTTCCTTCCCACAAAAATAAAAAAAAAGAAATTTATTTGTCATTCT CCCTCCTCCGGAGAGGGGAGAGAGAAAAAAACCATCTCTCGGAATGGACT TTTCTTCTTTTTAATTTTATTAATCTCGCTGTGTGGGTTGGGACGAAAAT GAAATAAAAGAAGAAATTTATTGTTATTTTTTTTTTTCTTTTTTTTTATT GTGTGTCCTCGCACCCTCCTCCCCCTCCCACATATACAGAGGTTAGTGGT CTTTTTCTTCN
quality values	Open. Hide. 9 9 9 9 9 10 15 17 26 19 22 22 23 20 20 17 18 18 18 14 16 15 15 12 12 12 9 9 10 19 23 21 21 18 21 28 28 36 39 33 33 33 33 33 33 39 59 59 30 26 24 30 32 33 41 40 40 37 37 28 28 30 36 36 39 48 48 42 42 47 42 42 42 48 48 48 48 48 48 42 47 48 42 48 48 48 48 48 46 43 43 43 43 43 48 57 46 48 41 47 47 57 57 57 57 57 47 47 47 57 59 59 59 59 57 57 57 48 48 48 40 40 30 30 38 42 59 59 57 57 57 57 54 57 57 50 50 35 35 35 43 50 57 57 57 57 54 54 57 46 46 38 35 35 46 52 52 52 52 52 43 43 35 43 42 52 44 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 57 57 59 59 59 52 52 45 57 57 57 57 57 57 57 57 57 57 57 57 35 35 35 43 43 43 43 35 35 43 43 43 52 57 57 57 57 57 39 43 43 52 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 52 62 62 62 62 62 62 62 62 62 52 52 43 43 39 43 43 62 62 62 62 62 62 62 52 62 62 52 52 62 52 52 52 52 45 45 52 52 52 52 52 57 52 57 52 52 57 57 57 39 43 43 43 43 35 39 39 42 39 39 43 43 52 57 57 52 52 39 42 39 43 28 33 33 43 43 39 45 45 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 54 54 54 57 57 57 57 57 52 52 43 50 50 54 54 57 57 52 52 52 57 43 50 39 43 43 43 43 57 57 50 57 42 36 32 43 43 42 42 35 35 42 44 42 43 40 44 57 57 57 57 57 57 59 59 59 57 42 37 30 37 44 57 57 57 54 44 44 39 39 35 42 42 48 48 48 39 42 36 36 36 46 46 57 57 42 42 30 30 41 43 43 48 34 32 20 20 31 32 32 43 43 39 35 36 34 25 28 28 37 41 46 46 46 47 37 36 35 31 29 28 29 29 30 30 30 33 39 15 14 9 9 9 16 21 37 41 31 32 36 32 32 37 37 37 39 39 41 32 30 24 22 33 33 37 37 41 41 36 37 41 40 36 34 39 33 34 28 32 25 28 28 24 24 20 20 17 16 11 11 11 12 12 23 21 28 20 19 19 28 28 24 19 12 24 15 13 13 17 17 18 10 10 11 11 14 23 23 17 13 13 14 14 12 11 11 10 15 15 15 20 26 26 22 20 22 16 16 10 10 9 9 9 9 10 10 22 19 16 12 12 16 13 16 27 29 28 28 25 37 30 22 20 22 23 16 16 10 10 10 10 10 10 12 17 11 12 12 22 15 16 10 10 10 10 12 9 9 9 9 8 12 12 6 6 6 6 7 10 12 9 9 8 8 8 9 8 8 8 8 8 13 9 14 14 14 9 10 9 8 8 11 17 25 24 37 24 19 14 12 13 18 12 12 12 11 13 11 9 9 9 9 9 8 11 11 8 8 8 8 8 8 10 12 12 12 10 9 9 11 10 8 10 10 10 10 8 10 10 8 10 8 8 8 8 8 8 10 11 11 11 14 11 11 8 8 8 8 8 8 10 11 6 6 6 8 8 8 8 9 9 10 11 12 18 12 12 12 11 14 12 23 14 16 12 8 10 10 14 14 15 12 12 8 8 6 10 6 6 6 8 6 8 9 9 10 10	Open. Hide. 11 13 13 11 3 0 3 10 8 8 8 8 9 9 9 12 9 3 0 0 0 0 3 6 6 8 6 6 6 6 11 11 9 9 9 3 0 0 3 9 9 9 9 11 11 11 11 8 7 3 0 0 0 3 3 0 3 0 0 3 6 6 6 8 8 6 8 6 6 8 8 9 9 14 8 8 8 8 8 8 13 11 13 19 23 17 15 8 7 7 8 8 8 12 12 18 15 16 16 14 11 11 8 8 8 8 10 8 21 15 9 8 8 13 12 9 9 9 9 8 8 8 8 8 8 8 8 9 8 8 8 8 10 14 10 8 8 8 8 10 10 8 8 9 10 13 14 31 15 13 13 15 13 11 10 11 10 10 6 6 7 7 9 13 16 12 10 10 11 10 10 9 10 10 9 14 12 18 9 10 10 11 11 11 13 19 13 13 13 10 10 9 8 8 9 9 9 8 8 9 12 11 11 7 13 6 6 6 7 13 14 14 20 19 28 28 30 21 26 17 9 8 8 8 10 10 10 11 13 13 10 10 8 8 8 10 8 8 10 8 8 6 6 8 8 10 12 12 13 13 14 12 10 10 10 10 18 20 10 7 6 6 6 7 14 15 13 8 8 8 10 12 11 10 8 8 8 8 8 8 8 8 8 8 9 8 6 6 6 7 15 13 22 17 13 10 10 12 11 11 10 9 9 10 15 24 23 11 10 10 10 13 16 22 14 8 8 8 8 8 8 13 13 9 8 10 8 9 9 8 8 8 8 8 9 12 11 10 10 9 9 10 8 6 6 6 8 8 10 10 8 8 8 8 10 13 16 16 13 9 8 8 8 8 13 16 26 24 25 25 16 13 9 9 9 9 9 10 18 21 19 16 15 10 10 8 8 8 8 10 10 8 11 9 8 8 8 8 8 9 9 9 9 7 12 9 7 10 6 11 11 17 10 6 6 6 8 8 12 12 11 12 12 13 14 26 16 17 16 20 14 12 16 17 15 11 10 8 10 6 6 6 8 8 6 6 6 8 22 24 26 23 13 10 8 8 8 6 6 8 8 10 10 8 8 8 8 8 8 8 15 15 18 21 19 8 8 8 8 8 9 6 6 8 8 6 6 8 6 9 9 8 8 8 8 8 12 10 10 8 8 10 13 13 13 12 23 12 11 10 8 8 8 10 10 7 13 6 6 6 6 8 9 9 8 8 6 6 8 8 8 8 8 8 6 6 6 7 7 12 8 8 8 8 8 8 10 9 15 16 24 33 33 33 24 24 20 20 22 19 19 17 21 18 13 12 9 6 8 8 8 8 8 10 21 19 15 10 9 9 9 9 3 0 3 8 8 8 8 8 12 18 17 15 16 15 8 8 6 6 7 6 10 10 10 9 8 8 6 6 6 6 8 8 9 10 10 15 17 13 9 9 9 8 8 8 10 10 8 12 8 6 6 6 8 8 8 8 8 6 11 6 6 6 8 8 8 8 8 8 8 8 8 8 6 8 8 8 8 10 8 8 8 8 8 9 11 11 11 10 8 8 6 6 8 9 11 11 9 11 8 7 7 9 9 8 10 8 8 6 6 8 6 9 9 11 11 9 9 9 18 11 9 8 6 8 8 10 10 8 8 6 6 6 6 8 10 8 6 6 8 8 8 8 8 8 9 8 8 6 6 8 6 12 10 10 11 11 11 11 11 17 11 11 11 11 13 13 10 8 8 8 8 6 6 6 11 15 10 8 8 8 8 8 10 7 9 10 10 13 11 14 12 12 8 8 13 12 14 19 12 12 12 12 10 9 9 9 9 9 9 15 16 28 13 12 9 8 10 8 13 8 8 6 8 6 6 8 8 9 9 9 9 6 8 7 6 8 8 13 13 12 11 7 7 7 7 8 8 8 8 8 8 8 8 6 6 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 12 8 9 9 9 9 9 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no548_c02.b1 MSMg01no548_c02.b1 CHROMAT_FILE:
MSMg01no548_c02.b1 PHD_FILE: MSMg01no548_c02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:58 2005
         (469 letters)



>mm_chr18_74291520_74292387
          Length = 868

 Score =  845 bits (437), Expect = 0.0
 Identities = 458/465 (98%), Gaps = 1/465 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctaggacattctggtcagctaactggtctctgttctagggcatggtccttgtca 64
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaattcctaggacattctggtgagctaactggtctctgttctagggcatggtccttgtca 609

                                                                       
Query: 65  ctgttgggagaaggatcttggggcattgaagggcatgaaagggatgcaaccagtgggcat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ctgttgggagaaggatcttggggcattgaagggcatgaaagggatgcaaccagtgggcat 549

                                                                       
Query: 125 agagaaaagcctacttctggtagacgtcaacacttcagagataagcaagcacagaactcc 184
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 548 ggagaaaagcctacttctggtagacgtcaagacttcagagataagcaagcacagaactcc 489

                                                                       
Query: 185 cttctgacggagcaaaagtaaccgatacgatgtgtgtgaacagccaggaggtggttaaga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 488 cttctgacggagcaaaagtaaccgatacgatgtgtgtgaacagccaggaggtgattaaga 429

                                                                       
Query: 245 caggatgaggagagaaaacagaagacagaagggcctgcgggatggacttccatctgagaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caggatgaggagagaaaacagaagacagaagggcctgcgggatggacttccatctgagaa 369

                                                                       
Query: 305 taactagaggttgccatgcctatagaagatacaaggaatgtatactggtatctgtaccaa 364
           |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 368 taactagaagttgccatgcctatagaagatacaaggaatgtatactggcatctgtaccaa 309

                                                                       
Query: 365 acagatgtttctggatatatactagataactagttatctctggagcttaatgttggagat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 308 acagatgtttctggatatatactagataactagttatctctggagcttaatgttggaga- 250

                                                        
Query: 425 tttgaggagaacttgtgggaatctctccttccatgagatcaatct 469
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttgaggagaacttgtgggaatctctccttccatgagatcaatct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 868
Length adjustment: 10
Effective length of query: 459
Effective length of database: 858
Effective search space:   393822
Effective search space used:   393822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information