BAC Information

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BAC

Clone NameB6Ng01-002E21
Chromosome19 (Build37)
Map Location 9,654,656 - 9,654,926
singlet/doubletsinglet
Overlap geneStxbp3b
Upstream geneEG623402, Slc22a8, Slc22a6, Chrm1, Slc3a2, Snord22, Wdr74, 1700092M07Rik, Stx5a, LOC100039902, Nxf1, 0610006I08Rik, 1810059G22Rik, Taf6l, LOC100039957, Polr2g, Zbtb3, Ttc9c, Hnrpul2, Gng3, Bscl2, 1110067I12Rik, D19Ertd721e, AI462493, 1810009A15Rik, Ints5, Ganab, B3gat3, Rom1, Eml3, Mta2, Tut1, Eef1g, Ahnak, Scgb1a1, Asrgl1, EG621699, LOC100040104, LOC623810, Pcna-ps2, LOC100040130, LOC100040137, LOC100040143, LOC100040152
Downstream geneLOC623688, LOC100040178, LOC100040192, 6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1, Fads3, Fads2, LOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla, Syt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002E21.bB6Ng01-002E21.g
ACCDH840370DH840371
length1,247271
definitionDH840370|Mus musculus domesticus DNA, BAC clone: B6Ng01-002E21, 5' end.DH840371|Mus musculus domesticus DNA, BAC clone: B6Ng01-002E21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcccaggtggttcctgtcagaccttctgtgtttatattcctc
tgttttgtgtaagaatccagtaacctctttgtaccttgctggtgtgtcac
ccaacttccctattttcttctgtataaaaagtttgatgctcgatttgaca
aattacattcagattctacacaacctctcctgtgtgcatctgtctgtcat
ttcatccaacactttgcccacctacgactagagacccgttccatgcagac
aaaggggcccagagggtctgcggcacaggagaaatggcaataatgcctct
aggggaagataccattatcttaatttgttcggtaaaatctggatctatca
ctcccggatgaactattaatctttgcatagtaaccaagcttctcacctaa
aatcaaccccactgtatcggccggtaatgggcctttgaaatctgtatcca
ccagctggataaccatgcctggagttaatacaagtcgggtggcggaattg
aggtccagtcctgcattccctcttgttgctctcctggatgactccattgc
attgggggtctcaaactgggccattctttggttactgccccatatatctg
tgggccctgggatcgggggcccctcctcaagttttttggccgagcaccac
catttccgaaatcaagaggctgtccacgaatatccttaactgatcgacaa
tcactggcccaatggttccctttttgcattttgggcacagcccaggcatc
ttaggccgctgatttcctgacccactcagctgtgggcattggcgcttcct
gtgacctggctgcccacacttaaagcagttattgttcttctggccgcccc
ttccttgggacatctgcatgacagcagcagccagaccagaattagcgaga
ggccctcctagttctctgcatattttcaaccaaacctctaacccattgtg
tttatacggactaattgcttgcctgttttctttagtacacctgctcaaaa
atcagctgcttcaacatggcatagcagtatcaggatctccgaacactctg
cctcctgccttttactaacgagccacaaaatctgcaaatggctccgtggg
gccctggacgaatcttgttaaattccacctcctttcccctcaatagaagg
aattccatgccttcctccatctatgactctggtccttaaccatgagtggg
gagtaaaagagctctctgtctcagcacctgaatgatataatctatca
atagatggaagtcgctatcttttacaaagcacttggtagccttttggaga
aggtaccattgttttgaaaaagatgagggtgatactggggaatataaatc
agtaattcacttttagacagaagtagtagcttagtataggcttaaagtaa
aatgtcccctgctcacattcaaaaatatgggacaagtaggtattttgaga
ctaatagtaagagtgtgtgtatttgtgtgtgtgtataatttatgtatgaa
tgtatgtatgtatgtatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_9654656_9654926
seq2: B6Ng01-002E21.g_74_344

seq1  ATAGATGGAAGTCGCTATCTTTTACAAAGCACTTGGTAGCCTTTTGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGGAAGTCGCTATCTTTTACAAAGCACTTGGTAGCCTTTTGGAGA  50

seq1  AGGTACCATTGTTTTGAAAAAGATGAGGGTGATACTGGGGAATATAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCATTGTTTTGAAAAAGATGAGGGTGATACTGGGGAATATAAATC  100

seq1  AGTAATTCACTTTTAGACAGAAGTAGTAGCTTAGTATAGGCTTAAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTCACTTTTAGACAGAAGTAGTAGCTTAGTATAGGCTTAAAGTAA  150

seq1  AATGTCCCCTGCTCACATTCAAAAATATGGGACAAGTAGGTATTTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCCCTGCTCACATTCAAAAATATGGGACAAGTAGGTATTTTGAGA  200

seq1  CTAATAGTAAGAGTGTGTGTATTTGTGTGTGTGTATAATTTATGTATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGTAAGAGTGTGTGTATTTGTGTGTGTGTATAATTTATGTATGAA  250

seq1  TGTATGTATGTATGTATGTAT  271
      |||||||||||||||||||||
seq2  TGTATGTATGTATGTATGTAT  271