BAC Information

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BAC

Clone NameB6Ng01-009C07
Chromosome19 (Build37)
Map Location 19,516,406 - 19,517,066
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383440, Ostf1, LOC666712, BC016495, LOC100042193, 2410127L17Rik, LOC100042184, D030056L22Rik, Trpm6, Rorb
Downstream geneLOC100042218, LOC100041541, Anxa1, LOC100041560, 1500015L24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009C07.bB6Ng01-009C07.g
ACCDH845166DH845167
length1,0671,137
definitionDH845166|Mus musculus domesticus DNA, BAC clone: B6Ng01-009C07, 5' end.DH845167|Mus musculus domesticus DNA, BAC clone: B6Ng01-009C07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaacacgtagtatttactcaaagccacactttgcctcctttcac
aaggcctagtaagacactagcatgctttctagatctataaatttgtctat
tctgcgtgttgaatattaatttaatcatataatggtacatcttttgagac
agtatttttcaatagcatagtattttcagattcatccttgttggaatgtg
tcatcatttcaggttttaatacttacaaaaactccactgtgcaggtagat
tatattttgtcattcaaatgttggcaacatagacatttctttttttttta
ttgtatgaatagtgctattgtgaacatttgtgcaagatgttttgcacata
ggtcttttgagtgtgttccaaggaatggactattttttatttcattttaa
gaaactcccagtctatctattgaatttctggtaacttttaccttccccca
tgttaagcatgatagttcaagtctttttattttttatttttttttaaatt
aggtattttcctcgtttacattttcaatgctatcccaaaggtcccccata
cccatcgccccaatcccctacccacccactccccctttttggccctggct
ttcccttgtactggagcatacaaagtttgcaagtccaatgggcctctctt
tgcagtgatggccgactaggccatcttttgatacatatgcagctaaagac
aagagctcccgggtactggttacctttctataaccttcctatcatatgtc
ttccttcttttgggtcacagtgaaaaatatcatggacttttctaatgtct
ggctaggttgaatatctttaaaaatgtactgttatatactaatttctata
ttttctttggagaaatttctgttcctaaataaatcttctgctcatctaaa
ttttaatttattttttcattttttggattattctttaagttaattttaaa
ttcttaatttataaattaaaaattaatttaataaattaaaaatttattta
ataataaattcttaattaataataaatttaattataaataaaatttaatt
ataaattaattctaatt
gaattctttgtttagctctgtaccacattttttaatagggttatttggtt
ttctggagtccaacatcttgagttctttataaatattggatattagtccc
ctatcagaattaggattggtaaaaatcttttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccgtacagaagctttgcaatttta
tgaggtcccatttgtcaattcttgatcttacagcacaagccactgctgtg
ctgttcaggattttttcccctgtacccatatcttcgaggcttttccaaat
gcaaatcaaaacaacctcacaccacctcacatcagtcagaatggctaaga
acaaaaattcaggtgacagcagatgctgtcgaggatgtggagaaagagga
acactcctccattgctggtgggattgcaagctggtacaagcattctgaaa
atctgtttggcggttcctcagaaaactgaggatccagcaatacctctcct
gggcatatacccagaagatgttctaacttgtattaaggacacatgctcca
ctatgttcatagcagacttatttataatagccagaagctggaaagaagcc
ggatgtccttcaacagaggaatgggtacagaaaatgtggtacatttacac
aatggagtactgctcagcaattaaaaatgatggatttatgaaattcttag
gcaaatggatggatctggaggatatcattctgagtgaggtaacccaatca
caaaaggatacatatgatatgcactcactgataggtggatattagcccag
aagctcggaacatccaagatacaatttgtaaaacacatgaaactcaagag
aaaggaagaccaaagagtgattacttcatttcttcttagactggggaaca
aatacctatgcaatgagttacaaacaaggtcagatctgtgacagaaggaa
ggatcatccagagactgcctcaccctggggtcaatcccataaaaaaatac
caaacccagatatatggatatgctacaagattttgctccagacttggaat
agtgcttctgtgaggctatggcaagtctgcaaaataggaagtgaatcatc
atagcactttggataaaaacataagggcctcccatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_19516406_19517066
seq2: B6Ng01-009C07.b_473_1115

seq1  TTTCTGGTAACTTTTACCTTCCCCCATGTTAAGCATGATAGTTCAAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTAACTTTTACCTTCCCCCATGTTAAGCATGATAGTTCAAGTCT  50

seq1  TTTTATTTTTTATTTTTTTTTAAATTAGGTATTTTCCTCGTTTACATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTTATTTTTTTTTAAATTAGGTATTTTCCTCGTTTACATTTT  100

seq1  CAATGCTATCCCAAAGGTCCCCCATACCCATCGCCCCAATCCCCTACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTATCCCAAAGGTCCCCCATACCCATCGCCCCAATCCCCTACCCA  150

seq1  CCCACTCCCCCTTTTTGGCCCTGGCTTTCCCTTGTACTGGAGCATACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCCCCTTTTTGGCCCTGGCTTTCCCTTGTACTGGAGCATACAAA  200

seq1  GTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCAT  250

seq1  CTTTTGATACATATGCAGCTAAAGACAAGAGCTCCCGGGTACTGGTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATACATATGCAGCTAAAGACAAGAGCTCCCGGGTACTGGTTACC  300

seq1  TTTCTATAACCTTCCTATCATATGTCTTCCTTCTTTTGGGTCACAGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATAACCTTCCTATCATATGTCTTCCTTCTTTTGGGTCACAGTGAA  350

seq1  AAATATCATGGACTTTTCTAATGTCTGGCTAGGTTGAATACCTTTAAAAA  400
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAATATCATGGACTTTTCTAATGTCTGGCTAGGTTGAATATCTTTAAAAA  400

seq1  TGTACTGTTATATACTAATTTCTATATTTTCTTTGGAGAAATTTCTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTTATATACTAATTTCTATATTTTCTTTGGAGAAATTTCTGTTC  450

seq1  CTAAATAAATCTTCTGCTCATCTAAATTTTAATTTATTTTTTCATTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAATCTTCTGCTCATCTAAATTTTAATTTATTTTTTCATTTTTT  500

seq1  GGATTATTCTTTAAGTTAATTTTAAATTCTTAATTTAATAAATTAAAAAA  550
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  GGATTATTCTTTAAGTTAATTTTAAATTCTTAATTT-ATAAATT-AAAAA  548

seq1  TTAATTTAATAAATTAAAAATTTAATTTAATAAATTAAATTCTTAATTTA  600
      ||||||||||||||||||||||| |||||||||  ||||||||||| |||
seq2  TTAATTTAATAAATTAAAAATTT-ATTTAATAA--TAAATTCTTAA-TTA  594

seq1  ATAAATTAAAATTTTAATTTAATAAATTAAAATTTTAATTTAATAAATTA  650
      ||||  ||||  |||||||  ||||||  ||| |||||||  ||||||| 
seq2  ATAA--TAAA--TTTAATT--ATAAAT--AAAATTTAATT--ATAAATT-  633

seq1  AATTCTTAATT  661
      ||||| |||||
seq2  AATTC-TAATT  643