BAC Information

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BAC

Clone NameB6Ng01-010P14
Chromosome19 (Build37)
Map Location 27,883,969 - 27,885,163
singlet/doubletsinglet
Overlap geneRfx3
Upstream geneGm815, LOC100042576, Vldlr, LOC100042588, Kcnv2, D19Bwg1357e, LOC667868, LOC100042612
Downstream geneLOC666997, LOC433235, Glis3, EG434460, EG627788
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010P14.bB6Ng01-010P14.g
ACCDH846488DH846489
length1,1631,205
definitionDH846488|Mus musculus domesticus DNA, BAC clone: B6Ng01-010P14, 5' end.DH846489|Mus musculus domesticus DNA, BAC clone: B6Ng01-010P14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaatagcataataattcttccttaaaaaataaatcatagaaga
tatgaagtgaaatatggcaaaaattagtatgctctaattatttgccaatg
accttggaaatggtaacaacaccagcctcatccaaggcagctttgtaagt
gactaaactatgattattttccaaatatttaggcaaacagaaattaaaat
agtctatattctactggtttatggcaaatgactacaggattcaatctgag
atccaggcagctttatttaaaattttgacatgtaacagaaaataaaatta
gaattttgttttctaagtccaccactctgttccatgagagatggcagggt
tcattgtgtggactgtcatatactacatagaaaaatgatgagagccccta
tgtcgtcatatgtatatttattcattacaacaagaattttcatgaaaatt
ttataatttaaagactatttcaatctttttggaggagtctgttgcttaga
atgatctcactgtacactccttagcaatgtaaataattatactccaattt
atacgccgaataaatatgagtcactcaaaacctctgaattatatttttat
aagctaataagctacttacagtcagtttaatctgaatgcagataactgag
gagttgtttaaagaatcttcaaatcattctcactgaatataacagttgtg
agatttttctcacatatataaaaatgacgtagaaacaccccaatactcaa
agaaatatcaatgggggatgaataccagctggcttatatcatgtcagaag
tgctggaaataagtaaggtgagatggagaacactcaattcagcaagatgt
tgataagaagaggacttgtcctagaatgtcaataacctagcatctctgac
agcacttgggttcactcaagcaatcttatttctggaccaagggggaaaat
ctatacatgctttaaactgaaacttcttatttatctcactgtcactgtca
ggaggattgactagatccacagctactctgtattgcaggcgattttacaa
ttactagataagctactgaattaaccacttaggaacctctatgcacatat
taggctctttaccagtggaatcagaataactgtgtactagatggaaggcc
ctcctcctcgaca
gaattctttgttcagttctaagccccaatttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttggagtttcattaggtcccat
ttgtcaattctcgatcttacagctattcagttaattttgattgtcaaacc
attccgatttgattagattagattagattggagttttctggactatgcat
tcattggagacctgaaaactttctggactctcagttacagccttcttgtc
agaggaaataatatatatacaggacaaaatgaaacacctaaacaaaaact
gccaacagaaagctgttctttgccattccttatttgtcttaattgatgca
gccttggctggctcggatcttactggatagaataggctggactggaactt
atggccatcttcctacgtctgtctccagagttctgggattgtaggcatgc
tttactatgcccagctatgcacatacagataatttataagatttgtaaag
ttagccattataaatgtgaaaccttaaagaatttagtgaaaaagtctgaa
ggactaaagaggaaaaaaaatgatgtttcatcaaagagagactacaatga
tggtgtagactttaaaaagagacacatgaatattctggaatttaaaagca
tagcaaatgagttaccagagggactcaacagcatacatgaactagcaggg
taagtagccaacttggaaatagttccacagagattatctggtgtaaagga
gatccccccacaaacaaaatacaggaaagtgacaaagagacaccatcaca
tgtaccaatgtagcataaacagctccatgagatgttcttttgccactttg
tgagttcttccttcttttccctctatccattttctcctaacactaacact
aatgagaacggaaattaaaaaaagaatgaaaaaaaagatagagcggaaag
ggaatgatggttatcactagactactaataagggcatcaggttcctgggc
caagtgattctcatgatcttcagtgcctgagtcttccaacccaaatcaag
taccaaaagcacatacccactgtctcttggacgttagctcatttaatgct
tcgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_27883969_27885163
seq2: B6Ng01-010P14.b_42_1204

seq1  GAATTCCAAATAGCATAATAATTCTTCCTTAAAAAATAAATCATAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATAGCATAATAATTCTTCCTTAAAAAATAAATCATAGAAGA  50

seq1  TATGAAGTGAAATATGGCAAAAATTAGTATGCTCTAATTATTTGCCAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGTGAAATATGGCAAAAATTAGTATGCTCTAATTATTTGCCAATG  100

seq1  ACCTTGGAAATGGTAACAACACCAGCCTCATCCAAGGCAGCTTTGTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGAAATGGTAACAACACCAGCCTCATCCAAGGCAGCTTTGTAAGT  150

seq1  GACTAAACTATGATTATTTTCCAAATATTTAGGCAAACAGAAATTAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAACTATGATTATTTTCCAAATATTTAGGCAAACAGAAATTAAAAT  200

seq1  AGTCTATATTCTACTGGTTTATGGCAAATGACTACAGGATTCAATCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATATTCTACTGGTTTATGGCAAATGACTACAGGATTCAATCTGAG  250

seq1  ATCCAGGCAGCTTTATTTAAAATTTTGACATGTAACAGAAAATAAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGCAGCTTTATTTAAAATTTTGACATGTAACAGAAAATAAAATTA  300

seq1  GAATTTTGTTTTCTAAGTCCACCACTCTGTTCCATGAGAGATGGCAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGTTTTCTAAGTCCACCACTCTGTTCCATGAGAGATGGCAGGGT  350

seq1  TCATTGTGTGGACTGTCATATACTACATAGAAAAATGATGAGAGCCCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGTGGACTGTCATATACTACATAGAAAAATGATGAGAGCCCCTA  400

seq1  TGTCGTCATATGTATATTTATTCATTACAACAAGAATTTTCATGAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTCATATGTATATTTATTCATTACAACAAGAATTTTCATGAAAATT  450

seq1  TTATAATTTAAAGACTATTTCAATCTTTTTGGAGGAGTCTGTTGCTTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTTAAAGACTATTTCAATCTTTTTGGAGGAGTCTGTTGCTTAGA  500

seq1  ATGATCTCACTGTACACTCCTTAGCAATGTAAATAATTATACTCCAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTCACTGTACACTCCTTAGCAATGTAAATAATTATACTCCAATTT  550

seq1  ATACGCCGAATAAATATGAGTCACTCAAAACCTCTGAATTATATTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGCCGAATAAATATGAGTCACTCAAAACCTCTGAATTATATTTTTAT  600

seq1  AAGCTAATAAGCTACTTACAGTCAGTTTAATCTGAATGCAGATAACTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAATAAGCTACTTACAGTCAGTTTAATCTGAATGCAGATAACTGAG  650

seq1  GAGTTGTTTAAAGAATCTTCAAATCATTCTCACTGAATATAACAGTTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTTTAAAGAATCTTCAAATCATTCTCACTGAATATAACAGTTGTG  700

seq1  AGATTTTTCTCACATATATAAAAATGACGTAGAAACACCCCAATACTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTCTCACATATATAAAAATGACGTAGAAACACCCCAATACTCAA  750

seq1  AGAAATATCAATGGGGGATGAATACCAGCTGGCTTATATCATGTCAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATCAATGGGGGATGAATACCAGCTGGCTTATATCATGTCAGAAG  800

seq1  TGCTGGAAATAAGTAAGGTGAGATGGAGAACACTCAATTCAGCAAGATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAAATAAGTAAGGTGAGATGGAGAACACTCAATTCAGCAAGATGT  850

seq1  TGATAAGAAGAGGACTTGTCCTAGAATGTCAATAACCTAGCATCTCTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGAAGAGGACTTGTCCTAGAATGTCAATAACCTAGCATCTCTGAC  900

seq1  AAGCACTTGGGTTCACTCAAGCAATCTTATTTCTGGACCAAGGGGGGAAA  950
       |||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  -AGCACTTGGGTTCACTCAAGCAATCTTATTTCTGGACCAAGGGGG--AA  947

seq1  AATCTATACATGCTTTAAACTGAAACTTCTTATTTTATCCTTCACTGTCA  1000
      |||||||||||||||||||||||||||||||| ||||||  |||||||| 
seq2  AATCTATACATGCTTTAAACTGAAACTTCTTA-TTTATC--TCACTGTC-  993

seq1  ACTGTCAGGAGGAATTGACTAGAAACCACAGGCTACTCTGTAATTTGCAG  1050
      |||||||||||| ||||||||| | ||||| |||||||||||  ||||||
seq2  ACTGTCAGGAGG-ATTGACTAG-ATCCACA-GCTACTCTGTA--TTGCAG  1038

seq1  GCAGATCTTACAAATCTACTAGGATAAAGCTACTTAAAATTTAAAACCAC  1100
      || ||| ||||||   ||||| ||| |||||||| ||   ||  ||||||
seq2  GC-GATTTTACAA--TTACTA-GAT-AAGCTACTGAA---TT--AACCAC  1078

seq1  TTAAGAGACCTCTATGCAACATATTAGCTCCTTTCTACCAGGTGAATTCA  1150
      ||| || |||||||||| |||||||||   || | ||||| ||| | |||
seq2  TTAGGA-ACCTCTATGC-ACATATTAG--GCTCTTTACCA-GTGGAATCA  1123

seq1  AGATACACTGATGTACTAGAATGGAGAAAGCCCTCCTCCTAGACA  1195
        ||| |||| |||||||| |||  ||| ||||||||||| ||||
seq2  GAATA-ACTG-TGTACTAG-ATG--GAAGGCCCTCCTCCTCGACA  1163