BAC Information

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BAC

Clone NameB6Ng01-017A12
Chromosome19 (Build37)
Map Location 13,887,212 - 13,987,934
singlet/doubletdoublet
Overlap geneOlfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504
Upstream geneLpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1
Downstream geneOlfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017A12.bB6Ng01-017A12.g
ACCDH850827DH850828
length9511,094
definitionDH850827|Mus musculus domesticus DNA, BAC clone: B6Ng01-017A12, 5' end.DH850828|Mus musculus domesticus DNA, BAC clone: B6Ng01-017A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,887,212 - 13,888,166)(13,986,831 - 13,987,934)
sequence
gaattccatggttatttctacatgaagagaaaagaactcatgtctctaaa
gtgaccgttgggtataagagttttgtatccacaaagcaatacgctcagca
aagaagacatctctggagatggagcgatggatctgcagttaagagatggc
tgatcctacagaggactaaggtttagtttccagtaactgaaggcaactca
caaccatctgtaatcccagtcccggtttagtttccagtaactgaaggcaa
ctcacaaccatctgtaatcccagtcccaggtgatgtgatgccctcttctg
gcctccaggtggtactgcacatacccatgcatagccagatgcagagaaaa
tagtcaaacacatgaaataaaaactaaagtaaaagaaaatttaaagaagt
ctttcttcagttaccattgattatgtgctgtgtaataaatatattttccc
aaataaacatgaaagtttgtttcatttcttggtgagtagaaatgattaat
tcatctccctctggccactgatttttaccatcactgggctgtcaacactg
aacttatcaatgtccatagaattgtatcaagagtatagggttgatattag
aatttttggttttttttttttttttttttttttttgagacaggtttctct
gtgtagccctggctgtcctggaactcactctgtagaccagacttgcctca
aactcagaagtccacctgcctctgtctcccgagtgctgggattaaaggca
ctactaccaccactgcccagcgatattagaattttaagtaacacaaagga
aaggataaatctatgttagcacttggactgtgctaagaaatttcttccat
catactcattatactatatttggattggggattgctgtatttatatgctc
ctgagaaaataaaatattacccaaattctcactctgagttagaggccaat
a
gaattctctggatcattattcagctccagggacgccaaaggactccaggg
agaagctgctcctctagagagaacacatatccgaagagacaagactcatt
atcacatcttctctatacatcctaagggataaaagaaaacattttggggt
tttatgactactcctaagctgttaacactcagaactcaatagcagctcct
gctgtagtacacttgttttttgtcactgaccatcatattctggctgaaat
tagtcagggataatagtggaactgtaactcagatctggggattttaagtg
aatgtctttttttgtaatatagaatttcttagtcctcatgtggctttttg
gccctaaaagtcactttcaatgttttattagaattccacaaggaagcatg
tttacttactcttaggagtaagtctggcatgtggcctgaatataactcat
ttgcttctgtacctagttgattactagctcatcatccttcaagatccact
tccaaggtttctatgttacacttactgtattgcagttctcatcttatcac
catatctaccacttacagtatccatgttagaagaatagaatttgagtttc
tgagtgttttgtgcagtggtcagtgattatccaaagcagaaactcaaatc
tgaagacagtgagaacagtaagtatcagtggaagtctcaaccacaaatgg
gacatttatatcatgtctttttgccaaagcttttggtccactgtgtaaaa
gaggatagtaagatcatgggagccaaaggttatggatggctgaagtaaag
ctaaattttctggatatgacagggccattgcactgccactctcaggagct
gtctttggctgaacaaggcatgcacaagatgaagccagtcagcatttctg
agtggaacatgaggggttcataagccctaatttacttgcttgcttatcac
tggtagagacccatgatcaaagttgacataaacggaaggatgaccatcca
gagactaccccaccagggtatccatccatattcagcaccaaacccagacc
tattgcctatgcagcagatttgctggaggacctgaatagctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13887212_13888166
seq2: B6Ng01-017A12.b_46_996

seq1  GAATTCCATGGTTATTTCTACATGAAGAGAAAAGAACTCATGTCTCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGTTATTTCTACATGAAGAGAAAAGAACTCATGTCTCTAAA  50

seq1  GTGACCGTTGGGTATAAGAGTTTTGTATCCACAAAGCAATACGCTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCGTTGGGTATAAGAGTTTTGTATCCACAAAGCAATACGCTCAGCA  100

seq1  AAGAAGACATCTCTGGAGATGGAGCGATGGATCTGCAGTTAAGAGATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACATCTCTGGAGATGGAGCGATGGATCTGCAGTTAAGAGATGGC  150

seq1  TGATCCTACAGAGGACTAAGGTTTAGTTTCCAGTAACTGAAGGCAACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTACAGAGGACTAAGGTTTAGTTTCCAGTAACTGAAGGCAACTCA  200

seq1  CAACCATCTGTAATCCCAGTCCCGGTTTAGTTTCCAGTAACTGAAGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATCTGTAATCCCAGTCCCGGTTTAGTTTCCAGTAACTGAAGGCAA  250

seq1  CTCACAACCATCTGTAATCCCAGTCCCAGGTGATGTGATGCCCTCTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAACCATCTGTAATCCCAGTCCCAGGTGATGTGATGCCCTCTTCTG  300

seq1  GCCTCCAGGTGGTACTGCACATACCCATGCATAGCCAGATGCAGAGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGGTGGTACTGCACATACCCATGCATAGCCAGATGCAGAGAAAA  350

seq1  TAGTCAAACACATGAAATAAAAACTAAAGTAAAAGAAAATTTAAAGAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAACACATGAAATAAAAACTAAAGTAAAAGAAAATTTAAAGAAGT  400

seq1  CTTTCTTCAGTTACCATTGATTATGTGCTGTGTAATAAATATATTTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCAGTTACCATTGATTATGTGCTGTGTAATAAATATATTTTCCC  450

seq1  AAATAAACATGAAAGTTTGTTTCATTTCTTGGTGAGTAGAAATGATTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACATGAAAGTTTGTTTCATTTCTTGGTGAGTAGAAATGATTAAT  500

seq1  TCATCTCCCTCTGGCCACTGATTTTTACCATCACTGGGCTGTCAACACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCCCTCTGGCCACTGATTTTTACCATCACTGGGCTGTCAACACTG  550

seq1  AACTTATCAATGTCCATAGAATTGTATCAAGAGTATAGGGTTGATATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATCAATGTCCATAGAATTGTATCAAGAGTATAGGGTTGATATTAG  600

seq1  AATTTTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGTTTCTC  650
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGG-TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGTTTCTC  649

seq1  TGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGACTTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGACTTGCCTC  699

seq1  AAACTCAGAAGTCCACCTGCCTCTGTCTCCCGAGTGCTGGGATTAAAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGAAGTCCACCTGCCTCTGTCTCCCGAGTGCTGGGATTAAAGGC  749

seq1  ACTACTACCACCACTGCCCAGCGATATTAGAATTTTAAGTAACACAAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTACCACCACTGCCCAGCGATATTAGAATTTTAAGTAACACAAAGG  799

seq1  AAAGGATAAATCTATGTTAGCACTT-GACTGTGCTAAGAAATTTCTTACC  849
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  AAAGGATAAATCTATGTTAGCACTTGGACTGTGCTAAGAAATTTCTT-CC  848

seq1  ATCATACTCAATTATACTATATTTGAATTGGGAATTGCTGTATTTATATT  899
      ||||||||| ||||||||||||||| |||||| ||||||||||||||| |
seq2  ATCATACTC-ATTATACTATATTTGGATTGGGGATTGCTGTATTTATA-T  896

seq1  GCTCCTGAGAAAATAAAATATTTACCCAAATTCTCACACTGAGTTAGAGG  949
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  GCTCCTGAGAAAATAAAATA-TTACCCAAATTCTCACTCTGAGTTAGAGG  945

seq1  CAAATA  955
      | ||||
seq2  CCAATA  951

seq1: chr19_13986831_13987934
seq2: B6Ng01-017A12.g_69_1162 (reverse)

seq1  GACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTGGCATATGCAATA  50
      ||||||||| ||| ||||| | |||| ||||| |||| ||||| ||||||
seq2  GACAGCTAT-TCA-GGTCC-TCCAGC-AAATC-TGCT-GCATAGGCAATA  44

seq1  GTGTCTGGGTTTGGTGGCTGATTATGGGATGGATACCCTGGTGGGGTAGT  100
      | ||||||||||||| ||||| ||| ||||||||||||||||||||||||
seq2  G-GTCTGGGTTTGGT-GCTGAATAT-GGATGGATACCCTGGTGGGGTAGT  91

seq1  CTCTGGATGGTCATTCCTTTCGTTTTATGTC-ACTTTGATCATGGTGTCT  149
      ||||||||||||| ||||| || |||||||| ||||||||||||| ||||
seq2  CTCTGGATGGTCA-TCCTTCCG-TTTATGTCAACTTTGATCATGG-GTCT  138

seq1  CTTCCCAGTGATAAGCAAGCAAGTAAA-TAGGGCTTATGAACCCCTCATG  198
      | | ||||||||||||||||||||||| ||||||||||||||||||||||
seq2  C-TACCAGTGATAAGCAAGCAAGTAAATTAGGGCTTATGAACCCCTCATG  187

seq1  TTCCACTCAGAAATGCTGACTGGCTTCATCTTGTGCATGCCTTGTTCAGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTCAGAAATGCTGACTGGCTTCATCTTGTGCATGCCTTGTTCAGC  237

seq1  CAAAGACAGCTCCTGAGAGTGGCAGTGCAATGGCCCTGTCATATCCAGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACAGCTCCTGAGAGTGGCAGTGCAATGGCCCTGTCATATCCAGAA  287

seq1  AATTTAGCTTTACTTCAGCCATCCATAACCTTTGGCTCCCATGATCTTAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGCTTTACTTCAGCCATCCATAACCTTTGGCTCCCATGATCTTAC  337

seq1  TATCCTCTTTTACACAGTGGACCAAAAGCTTTGGC-AAAAGACATGATAT  397
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATCCTCTTTTACACAGTGGACCAAAAGCTTTGGCAAAAAGACATGATAT  387

seq1  AAATGTCCCATTTGTGGTTGAGACTTCCACTGATACTTACTGTTCTCACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCCATTTGTGGTTGAGACTTCCACTGATACTTACTGTTCTCACT  437

seq1  GTCTTCAGATTTGAGTTTCTGCTTTGGATAATCACTGACCACTGCACAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAGATTTGAGTTTCTGCTTTGGATAATCACTGACCACTGCACAAA  487

seq1  ACACTCAGAAACTCAAATTCTATTCTTCTAACATGGATACTGTAAGTGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGAAACTCAAATTCTATTCTTCTAACATGGATACTGTAAGTGGT  537

seq1  AGATATGGTGATAAGATGAGAACTGCAATACAGTAAGTGTAACATAGAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGGTGATAAGATGAGAACTGCAATACAGTAAGTGTAACATAGAAA  587

seq1  CCTTGGAAGTGGATCTTGAAGGATGATGAGCTAGTAATCAACTAGGTACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAAGTGGATCTTGAAGGATGATGAGCTAGTAATCAACTAGGTACA  637

seq1  GAAGCAAATGAGTTATATTCAGGCCACATGCCAGACTTACTCCTAAGAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAATGAGTTATATTCAGGCCACATGCCAGACTTACTCCTAAGAGT  687

seq1  AAGTAAACATGCTTCCTTGTGGAATTCTAATAAAACATTGAAAGTGACTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACATGCTTCCTTGTGGAATTCTAATAAAACATTGAAAGTGACTT  737

seq1  TTAGGGCCAAAAAGCCACATGAGGACTAAGAAATTCTATATTACAAAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCCAAAAAGCCACATGAGGACTAAGAAATTCTATATTACAAAAAA  787

seq1  AGACATTCACTTAAAATCCCCAGATCTGAGTTACAGTTCCACTATTATCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTCACTTAAAATCCCCAGATCTGAGTTACAGTTCCACTATTATCC  837

seq1  CTGACTAATTTCAGCCAGAATATGATGGTCAGTGACAAAAAACAAGTGTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAATTTCAGCCAGAATATGATGGTCAGTGACAAAAAACAAGTGTA  887

seq1  CTACAGCAGGAGCTGCTATTGAGTTCTGAGTGTTAACAGCTTAGGAGTAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCAGGAGCTGCTATTGAGTTCTGAGTGTTAACAGCTTAGGAGTAG  937

seq1  TCATAAAACCCCAAAATGTTTTCTTTTATCCCTTAGGATGTATAGAGAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAACCCCAAAATGTTTTCTTTTATCCCTTAGGATGTATAGAGAAG  987

seq1  ATGTGATAATGAGTCTTGTCTCTTCGGATATGTGTTCTCTCTAGAGGAGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATAATGAGTCTTGTCTCTTCGGATATGTGTTCTCTCTAGAGGAGC  1037

seq1  AGCTTCTCCCTGGAGTCCTTTGGCGTCCCTGGAGCTGAATAATGATCCAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTCCCTGGAGTCCTTTGGCGTCCCTGGAGCTGAATAATGATCCAG  1087

seq1  AGAATTC  1104
      |||||||
seq2  AGAATTC  1094