BAC Information

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BAC

Clone NameB6Ng01-023L02
Chromosome19 (Build37)
Map Location 10,286,977 - 10,468,288
singlet/doubletdoublet
Overlap geneGm98, Dagla, Syt7
Upstream geneEG621699, LOC100040104, LOC623810, Pcna-ps2, LOC100040130, LOC100040137, LOC100040143, LOC100040152, Stxbp3b, LOC623688, LOC100040178, LOC100040192, 6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1, Fads3, Fads2, LOC100040227, Fads1, Fen1, 1810006K21Rik
Downstream geneGm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023L02.bB6Ng01-023L02.g
ACCDH855539DH855540
length748511
definitionDH855539|Mus musculus domesticus DNA, BAC clone: B6Ng01-023L02, 5' end.DH855540|Mus musculus domesticus DNA, BAC clone: B6Ng01-023L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,286,977 - 10,287,724)(10,467,772 - 10,468,288)
sequence
gaattctccagcagctggatggaggtcagggatggcgctgggtctggaag
aagagaggctgttggggcagtgagaaagggaaaggtagatgccaaatgac
atcacacttgggactttcacacctcggtgcaagcgagaattcttctctcc
agaccctcacaacaggatcataccacacccctctccgggcagctctagga
ccagctagttctcataacctgagagctgcctctttcataaaaccaagaca
ctcagaagcaagtggaggtccttctccacatttctttctcagccctgggc
tcagcaattgtcactgtggcagcagaaaccagccatgaaagggtagaaca
gaacacacagcccgggtggcccccagcatgtggctgacaccgagccagct
cactgctgaggtgtaacgtggagttgggagaagaggttacatgttcatct
cactacctcaggcctgctaccgcctagtcctttaccccggaaatgggaag
ctatggtcaccagcctctcaacatttgcttgacctggtacattttcagct
cttttaaggtacaaactcaaggtctgcagcagcacccagaacaccctgtg
aagctacccgatacagacaagatggctttcttttaggcaacccgcccccc
agatgtcttttaaagatagctcatgtcacctcttctgggaagcctgtcct
ggttgcccctttccttggtcctccaagactatgttccctcccctattc
tgctgggtgagacagagtctggccctccagaggcaagttggacaaagccc
agcagggctaccccctgctgcctggaggtcagcacctccatgtccatgga
actggcacgattcgcttggcaccactggctggggttccctggcaagggag
aagggtacccaggcttagcctggcacagactggctccggcacctggccag
agcagtgaccgccctgatggagaaagctgacctcattgaccgtgagtgcc
acctgtgggcaccgaccatggaatggggacacagagatgtctgtgcccac
ctgggatatctcagtgtctctgagaggccatggaaccagctcctcctcct
ccactcaggactgagcctcccagccagcgcatggccccctcaccagctat
tcccctgctgttccaggcctgattcccctgggggaagcagttattgaaaa
cggtccatcagattcaataaggattcaaagtccctgggagaataggtggt
gggtggagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_10286977_10287724
seq2: B6Ng01-023L02.b_46_793

seq1  GAATTCTCCAGCAGCTGGATGGAGGTCAGGGATGGCGCTGGGTCTGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGCAGCTGGATGGAGGTCAGGGATGGCGCTGGGTCTGGAAG  50

seq1  AAGAGAGGCTGTTGGGGCAGTGAGAAAGGGAAAGGTAGATGCCAAATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGCTGTTGGGGCAGTGAGAAAGGGAAAGGTAGATGCCAAATGAC  100

seq1  ATCACACTTGGGACTTTCACACCTCGGTGCAAGCGAGAATTCTTCTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACTTGGGACTTTCACACCTCGGTGCAAGCGAGAATTCTTCTCTCC  150

seq1  AGACCCTCACAACAGGATCATACCACACCCCTCTCCGGGCAGCTCTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTCACAACAGGATCATACCACACCCCTCTCCGGGCAGCTCTAGGA  200

seq1  CCAGCTAGTTCTCATAACCTGAGAGCTGCCTCTTTCATAAAACCAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTAGTTCTCATAACCTGAGAGCTGCCTCTTTCATAAAACCAAGACA  250

seq1  CTCAGAAGCAAGTGGAGGTCCTTCTCCACATTTCTTTCTCAGCCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGCAAGTGGAGGTCCTTCTCCACATTTCTTTCTCAGCCCTGGGC  300

seq1  TCAGCAATTGTCACTGTGGCAGCAGAAACCAGCCATGAAAGGGTAGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAATTGTCACTGTGGCAGCAGAAACCAGCCATGAAAGGGTAGAACA  350

seq1  GAACACACAGCCCGGGTGGCCCCCAGCATGTGGCTGACACCGAGCCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACACAGCCCGGGTGGCCCCCAGCATGTGGCTGACACCGAGCCAGCT  400

seq1  CACTGCTGAGGTGTAACGTGGAGTTGGGAGAAGAGGTTACATGTTCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTGAGGTGTAACGTGGAGTTGGGAGAAGAGGTTACATGTTCATCT  450

seq1  CACTACCTCAGGCCTGCTACCGCCTAGTCCTTTACCCCGGAAATGGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACCTCAGGCCTGCTACCGCCTAGTCCTTTACCCCGGAAATGGGAAG  500

seq1  CTATGGTCACCAGCCTCTCAACATTTGCTTGACCTGGTACATTTTCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTCACCAGCCTCTCAACATTTGCTTGACCTGGTACATTTTCAGCT  550

seq1  C-TTTAAGGTACAAACTCAAGGTCTGCAGCAGCACCCAGAACACCCTGTG  599
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAGGTACAAACTCAAGGTCTGCAGCAGCACCCAGAACACCCTGTG  600

seq1  AAGCTACCCGATACAGACAAGATGGCTTTCTTCTTAGGCAACCCGCCCCC  649
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGCTACCCGATACAGACAAGATGGCTTTCTT-TTAGGCAACCCGCCCCC  649

seq1  CAGATGTCTTTCAAAGATAGCTCAATGTCACCTCTTCTGGGAAGCCTGCC  699
      ||||||||||| ||||||||||| |||||||||||||||||||||||| |
seq2  CAGATGTCTTTTAAAGATAGCTC-ATGTCACCTCTTCTGGGAAGCCTGTC  698

seq1  CTGGTTGCCTCCTTCCTTGGTCCTCCTAGACTATGTTCCCT-CCCTATTC  748
      ||||||||| | |||||||||||||| |||||||||||||| ||||||||
seq2  CTGGTTGCCCCTTTCCTTGGTCCTCCAAGACTATGTTCCCTCCCCTATTC  748

seq1: chr19_10467772_10468288
seq2: B6Ng01-023L02.g_69_585 (reverse)

seq1  ACTCTCCACCCACCACCTATTCTCCCAGGGACTTTGAATCCTTATTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCACCCACCACCTATTCTCCCAGGGACTTTGAATCCTTATTGAAT  50

seq1  CTGATGGACCGTTTTCAATAACTGCTTCCCCCAGGGGAATCAGGCCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGACCGTTTTCAATAACTGCTTCCCCCAGGGGAATCAGGCCTGGA  100

seq1  ACAGCAGGGGAATAGCTGGTGAGGGGGCCATGCGCTGGCTGGGAGGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGGGAATAGCTGGTGAGGGGGCCATGCGCTGGCTGGGAGGCTCA  150

seq1  GTCCTGAGTGGAGGAGGAGGAGCTGGTTCCATGGCCTCTCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGTGGAGGAGGAGGAGCTGGTTCCATGGCCTCTCAGAGACACTG  200

seq1  AGATATCCCAGGTGGGCACAGACATCTCTGTGTCCCCATTCCATGGTCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCCCAGGTGGGCACAGACATCTCTGTGTCCCCATTCCATGGTCGG  250

seq1  TGCCCACAGGTGGCACTCACGGTCAATGAGGTCAGCTTTCTCCATCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACAGGTGGCACTCACGGTCAATGAGGTCAGCTTTCTCCATCAGGG  300

seq1  CGGTCACTGCTCTGGCCAGGTGCCGGAGCCAGTCTGTGCCAGGCTAAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCACTGCTCTGGCCAGGTGCCGGAGCCAGTCTGTGCCAGGCTAAGCC  350

seq1  TGGGTACCCTTCTCCCTTGCCAGGGAACCCCAGCCAGTGGTGCCAAGCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACCCTTCTCCCTTGCCAGGGAACCCCAGCCAGTGGTGCCAAGCGA  400

seq1  ATCGTGCCAGTTCCATGGACATGGAGGTGCTGACCTCCAGGCAGCAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGCCAGTTCCATGGACATGGAGGTGCTGACCTCCAGGCAGCAGGGG  450

seq1  GTAGCCCTGCTGGGCTTTGTCCAACTTGCCTCTGGAGGGCCAGACTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCTGCTGGGCTTTGTCCAACTTGCCTCTGGAGGGCCAGACTCTGT  500

seq1  CTCACCCAGCAGAATTC  517
      |||||||||||||||||
seq2  CTCACCCAGCAGAATTC  517