BAC Information

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BAC

Clone NameB6Ng01-024H09
Chromosome19 (Build37)
Map Location 15,669,879 - 15,802,521
singlet/doubletdoublet
Overlap geneLOC667482
Upstream geneTle4, EG433225, EG635497, Pomc-ps1
Downstream genePsat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438, Gna14, LOC666665, Vps13a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024H09.bB6Ng01-024H09.g
ACCDH856089DH856090
length269301
definitionDH856089|Mus musculus domesticus DNA, BAC clone: B6Ng01-024H09, 5' end.DH856090|Mus musculus domesticus DNA, BAC clone: B6Ng01-024H09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,669,879 - 15,670,147)(15,802,221 - 15,802,521)
sequence
gaattctttattagaaaatcttctaaaaccaaggtatgggtttaaagtta
accacacctcagcttaaagttttctaaatttttccatctaatggcttgag
atatttttcctcagccctattcaagttcactaaaattaactaaattcctc
aaagtctgtcttctgctttcccctcattggctaaagtcttgggcacaaat
aaaggttatagagttggacaccagctctctctctctctctctctctctct
ctctctctctctttctctc
ttcctgcaccctttgttctgcctccagaaagttaaaattagaagaaaccc
atggttataattattatccgggcaggataggcctaggtggcaaactgagt
tgctctctccttcttccagtgcacgctgtaaactgagcctcttttgtttg
cttgtgttctctgtcctaagtgtgagtacttagcaagctggtagatgtgg
ctggtgctctgctgatcttgacaagcagagacagaccccttacacatctt
ttcaagtagggcagtcagtatggtccttgtatgggatggggtggggtata
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15669879_15670147
seq2: B6Ng01-024H09.b_43_311

seq1  GAATTCTTTATTAGAAAATCTTCTAAAACCAAGGTATGGGTTTAAAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATTAGAAAATCTTCTAAAACCAAGGTATGGGTTTAAAGTTA  50

seq1  ACCACACCTCAGCTTAAAGTTTTCTAAATTTTTCCATCTAATGGCTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACCTCAGCTTAAAGTTTTCTAAATTTTTCCATCTAATGGCTTGAG  100

seq1  ATATTTTTCCTCAGCCCTATTCAAGTTCACTAAAATTAACTAAATTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCCTCAGCCCTATTCAAGTTCACTAAAATTAACTAAATTCCTC  150

seq1  AAAGTCTGTCTTCTGCTTTCCCCTCATTGGCTAAAGTCTTGGGCACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGTCTTCTGCTTTCCCCTCATTGGCTAAAGTCTTGGGCACAAAT  200

seq1  AAAGGTTATAGAGTTGGACACCAGCTCTCTCTCTCTCTCTCTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTATAGAGTTGGACACCAGCTCTCTCTCTCTCTCTCTCTCTCTCT  250

seq1  CTCTCTCTCTCTTTCTCTC  269
      |||||||||||||||||||
seq2  CTCTCTCTCTCTTTCTCTC  269

seq1: chr19_15802221_15802521
seq2: B6Ng01-024H09.g_75_375 (reverse)

seq1  CTATACCCCACCCCATCCCATACAAGGACCATACTGACTGCCCTACTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACCCCACCCCATCCCATACAAGGACCATACTGACTGCCCTACTTGA  50

seq1  AAAGATGTGTAAGGGGTCTGTCTCTGCTTGTCAAGATCAGCAGAGCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTGTAAGGGGTCTGTCTCTGCTTGTCAAGATCAGCAGAGCACCA  100

seq1  GCCACATCTACCAGCTTGCTAAGTACTCACACTTAGGACAGAGAACACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATCTACCAGCTTGCTAAGTACTCACACTTAGGACAGAGAACACAA  150

seq1  GCAAACAAAAGAGGCTCAGTTTACAGCGTGCACTGGAAGAAGGAGAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAAAAGAGGCTCAGTTTACAGCGTGCACTGGAAGAAGGAGAGAGC  200

seq1  AACTCAGTTTGCCACCTAGGCCTATCCTGCCCGGATAATAATTATAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGTTTGCCACCTAGGCCTATCCTGCCCGGATAATAATTATAACCA  250

seq1  TGGGTTTCTTCTAATTTTAACTTTCTGGAGGCAGAACAAAGGGTGCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTCTTCTAATTTTAACTTTCTGGAGGCAGAACAAAGGGTGCAGGA  300

seq1  A  301
      |
seq2  A  301