BAC Information

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BAC

Clone NameB6Ng01-029C21
Chromosome19 (Build37)
Map Location 13,639,328 - 13,640,383
singlet/doubletsinglet
Overlap genenone
Upstream gene4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655
Downstream geneOlfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029C21.bB6Ng01-029C21.g
ACCDH859453DH859454
length1,2331,049
definitionDH859453|Mus musculus domesticus DNA, BAC clone: B6Ng01-029C21, 5' end.DH859454|Mus musculus domesticus DNA, BAC clone: B6Ng01-029C21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagcccaatttttaagggggttatttgattt
tctggagtccaccctcttgagttcttaatatatattggatattaatcccc
tatctgatttaagataggtaaagatcctttcccaatctgttggaggcctt
tttgtcttattgacgctgtcttttgccttgcagaagctttgcagtttcat
gaggtcccatttgtcaatcctcgctcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatctttgaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaacgagataggtatagatcaattcaca
ttcttttacatgataacaaccacttgtgccagcaccatttgttgaaaatg
ctgtctttcttccacttgatggttttagcgcccttttcgaagatcaagtg
accataggtgtgttggttcatttctgggtcttcaattctattccattggt
ctacttgtctctcaatataccagtaccaggcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgtttccaccagagttactttt
atccttgggaagagtttttgctatcctaggttttttgttattccagatga
atttgcagattgctctttctaattcgttgaagaattgagttggaattttg
atggggattgcattcaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaatttttatcataca
tatctttcacttccttagttagagtcacaccaggatattttatgttattt
gtgactattgagaaggtgtgtttccctaatttcttctcagcctgtttatt
ctttgtgaaggaaatccaatgacttgtttgcgttattttattctagctac
tcactggagctgttatcaggtttaagaggttcctctggggaattaggtca
cttaatataactatccaaccatctgccaagggaattggacttcctttcaa
ttgtatcctgattctttgggtgcatgtctcgctgaatcaaggacatggaa
tagaggggaaagtgggtactaacgcttccattc
gaattcaaaagtgaaagtagagaaaagaaatgaaagatggtatatagaga
taaacttctgtcagaaaaacttcttttaatgggcaggaacattcaacaca
gatattcatgcctggtcaaattgctgagagtaagagattgagtgttcaca
taaaaatagaacatgcatattaaccctatcagcactacctaggctctggg
aacacacaggaagtggaaatgaaaatatattattgccagaggaagagaag
gaaatctattaaatgataatttctggatatgacatgggtaatataatcct
gaattcagcaactatagttatatgcataagaactatacataactaagtga
gtacaataacccaaatatatttgttagatattctccaggcctcactgctt
agttgggagctattggaaaataatattttctgcagaagaaacagtttttg
aggatgtgacaactacacatttcccattctccagtgcatagctccatggc
cataaataaaactcactgcattaatgatttattgaaaaaaaaaaacacca
ccaagactaacaacaacagcaacaacaaaagcatgtagtttttttgggag
tatgttacagtagtcatgggaagagttggagggggaacatggatgataga
tcattatatattatatctcaattttacattatgaaaattttcaaattaaa
aatatatagtccagcaagtataaatatattaaacttatttcacaagcatt
taagtcatagaattttaattgcttttgttctgagaaattggagtgagaat
caatcactactttcagaggaagtctgttccctgagagaatctatgtttgt
acaattttcacctagctcccaaactggccactgacatattttcatagtct
tgtgtggaattatattaaagaacaagactctgagcagactgccattgctt
ttcatttttcagtgattctagtacatttagagcacacaatgacaattcca
gagtttgtggtgtttgtgtggatgatgagtttgaacttaagcaggcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13639328_13640383
seq2: B6Ng01-029C21.g_67_1115

seq1  GAATTCAAAAGTGAAAGTAGAGAAAAGAAATGAAAGATGGTATATAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGTGAAAGTAGAGAAAAGAAATGAAAGATGGTATATAGAGA  50

seq1  TAAACTTCTGTCAGAAAAACTTCTTTTAATGGGCAGGAACATTCAACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTCTGTCAGAAAAACTTCTTTTAATGGGCAGGAACATTCAACACA  100

seq1  GATATTCATGCCTGGTCAAATTGCTGAGAGTAAGAGATTGAGTGTTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCATGCCTGGTCAAATTGCTGAGAGTAAGAGATTGAGTGTTCACA  150

seq1  TAAAAATAGAACATGCATATTAACCCTATCAGCACTACCTAGGCTCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAGAACATGCATATTAACCCTATCAGCACTACCTAGGCTCTGGG  200

seq1  AACACACAGGAAGTGGAAATGAAAATATATTATTGCCAGAGGAAGAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACAGGAAGTGGAAATGAAAATATATTATTGCCAGAGGAAGAGAAG  250

seq1  GAAATCTATTAAATGATAATTTCTGGATATGACATGGGTAATATAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTATTAAATGATAATTTCTGGATATGACATGGGTAATATAATCCT  300

seq1  GAATTCAGCAACTATAGTTATATGCATAAGAACTATACATAACTAAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAACTATAGTTATATGCATAAGAACTATACATAACTAAGTGA  350

seq1  GTACAATAACCCAAATATATTTGTTAGATATTCTCCAGGCCTCACTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATAACCCAAATATATTTGTTAGATATTCTCCAGGCCTCACTGCTT  400

seq1  AGTTGGGAGCTATTGGAAAATAATATTTTCTGCAGAAGAAACAGTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGAGCTATTGGAAAATAATATTTTCTGCAGAAGAAACAGTTTTTG  450

seq1  AGGATGTGACAACTACACATTTCCCATTCTCCAGTGCATAGCTCCATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTGACAACTACACATTTCCCATTCTCCAGTGCATAGCTCCATGGC  500

seq1  CATAAATAAAACTCACTGCATTAATGATTTATTGAAAAAAAAAAACACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAAAACTCACTGCATTAATGATTTATTGAAAAAAAAAAACACCA  550

seq1  CCAAGACTAACAACAACAGCAACAACAAAAGCATGTAGTTTTTTTGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACTAACAACAACAGCAACAACAAAAGCATGTAGTTTTTTTGGGAG  600

seq1  TATGTTACAGTAGTCATGGGAAGAGTTGGAGGGGGAACATGGATGATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTACAGTAGTCATGGGAAGAGTTGGAGGGGGAACATGGATGATAGA  650

seq1  TCATTATATATTATATCTCAATTTTACATTATGAAAATTTTCAAATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATATATTATATCTCAATTTTACATTATGAAAATTTTCAAATTAAA  700

seq1  AATATATAGTCCAGCAAGTATAAATATATTAAACTTATTTCACAAGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAGTCCAGCAAGTATAAATATATTAAACTTATTTCACAAGCATT  750

seq1  TAAGTCATAGAATTTTAATTGCTTTTGTTCTGAGAAATTGGAGTGAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCATAGAATTTTAATTGCTTTTGTTCTGAGAAATTGGAGTGAGAAT  800

seq1  CAATCACTACTTTCAGAGGAAGTCTGTTCCCTGAGAGAATTCTATGTTTG  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAATCACTACTTTCAGAGGAAGTCTGTTCCCTGAGAGAA-TCTATGTTTG  849

seq1  TACAATTTTCACCTAGCTCCCCAAACTGGCCACTGACATATTTTCATAGT  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TACAATTTTCACCTAGCT-CCCAAACTGGCCACTGACATATTTTCATAGT  898

seq1  CTTGTGTGGAATTATATTAAAGAAACAAGACTCTGAGCAGACTGCCATTG  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTGTGTGGAATTATATTAAAG-AACAAGACTCTGAGCAGACTGCCATTG  947

seq1  CTTTTCATTTTTTCAGGTGAATTCTAGTACATTTAGAGCACACAATGACA  1000
      ||||||| ||||||| ||| ||||||||||||||||||||||||||||||
seq2  CTTTTCA-TTTTTCA-GTG-ATTCTAGTACATTTAGAGCACACAATGACA  994

seq1  ATTCCCAGAGTTTTGTGTGTATGTGT-GATGATGAGTATGAAACTTAAGC  1049
      ||| |||||||||   |||| ||||| |||||||||| || |||||||||
seq2  ATT-CCAGAGTTTGTGGTGTTTGTGTGGATGATGAGTTTG-AACTTAAGC  1042

seq1  AGGCAAA  1056
      |||||||
seq2  AGGCAAA  1049