BAC Information

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BAC

Clone NameB6Ng01-030P12
Chromosome19 (Build37)
Map Location 29,273,404 - 29,398,270
singlet/doubletdoublet
Overlap geneJak2, Insl6
Upstream geneGlis3, EG434460, EG627788, Slc1a1, LOC545262, 4430402I18Rik, Ppapdc2, LOC100042006, EG226086, Cdc37l1, LOC672214, Ak3, Rcl1, LOC433238
Downstream geneRln1, 5033414D02Rik, Cd274, Pdcd1lg2, C030046E11Rik, D19Wsu12e, Mlana, 9930021J03Rik, Ranbp6, Il33, Trpd52l3, Uhrf2, Gldc, EG625917, Mbl2, LOC100042088
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030P12.bB6Ng01-030P12.g
ACCDH860716DH860717
length578715
definitionDH860716|Mus musculus domesticus DNA, BAC clone: B6Ng01-030P12, 5' end.DH860717|Mus musculus domesticus DNA, BAC clone: B6Ng01-030P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,273,404 - 29,273,987)(29,397,558 - 29,398,270)
sequence
atcagagttggcctatgaactctttatcacctagccacaagatcagcata
gaaaattaaagagagcatttagaaacatatttaaaaagagctattcctag
ggcattatgtacaaaaggagtgtactctttagaacagaatagtgacttca
ggagttgttgaattcagacttgggtatggcatgggctgtatacgaataca
gcataggctgcatgctagctacactcagcccatctacaaaacagtgcata
acatactagcacagtctggccgcccatggcaagaagcacaaggagtatcc
tctacacaattcaaagccctcaagttttgtaagtcaaatcatttatctgt
ttctaagcacagtgtaatgacctttccttatctactggagtttgacatct
tcctcctccttctgctttacctgggtaattaataatgaacagaaatgtgt
cgtctgtggttctggaggctgagctgtctaagatggagggatatacctag
tgagggctttcttctgtgttataggtgggggaggacatcacggctagagg
agaagggaagagttggggggtgggtagg
gaattcatttctgtttgatttcaaatgttacagaattaataaccatgtat
tacctagactatttcctcttttcttactgcattttgctccctttaatctt
tgctttttttgtttagttataactctgtcttactcactgtaatagcagaa
aaggacgggaagccacgccctccagcttcaggggacagagcgagcctggc
aaaacctcacactgcaagtgggggttggaaagaaagacccagtgatagat
tcagaaaggccaagaatccacgcagactctgacctcctctatttcccttc
tttcccttttcttcctcctcctcgtccctctccttctttttgcccatttg
tatttgtgttcctttattctatgacaagcctcatgcaatcttttcagtct
tgaaactcactctttctcctcttcctcctcccctccttcttccaccttct
ctctctctctttctcctccaccacctcgtcttcctcctctgtctctgctt
tctcctcctcttcctcctcctcctcctcctcctccttctcttctaatttc
aaactacagaaatgtgactgagccaattagtttccccacacaccatggat
tatcctcccccataaagatttccttctttgagcttacagtggggttacag
gatgcagagtgcagctcacagagctgaatctctggttaaagccttggcgg
gggggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_29273404_29273987
seq2: B6Ng01-030P12.b_48_631

seq1  GAATTCATCAGAGTTGGCCTATGAACTCTTTATCACCTAGCCACAAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGAGTTGGCCTATGAACTCTTTATCACCTAGCCACAAGATC  50

seq1  AGCATAGAAAATTAAAGAGAGCATTTAGAAACATATTTAAAAAGAGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAAAATTAAAGAGAGCATTTAGAAACATATTTAAAAAGAGCTAT  100

seq1  TCCTAGGGCATTATGTACAAAAGGAGTGTACTCTTTAGAACAGAATAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGGCATTATGTACAAAAGGAGTGTACTCTTTAGAACAGAATAGTG  150

seq1  ACTTCAGGAGTTGTTGAATTCAGACTTGGGTATGGCATGGGCTGTATACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGGAGTTGTTGAATTCAGACTTGGGTATGGCATGGGCTGTATACG  200

seq1  AATACAGCATAGGCTGCATGCTAGCTACACTCAGCCCATCTACAAAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCATAGGCTGCATGCTAGCTACACTCAGCCCATCTACAAAACAG  250

seq1  TGCATAACATACTAGCACAGTCTGGCCGCCCATGGCAAGAAGCACAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAACATACTAGCACAGTCTGGCCGCCCATGGCAAGAAGCACAAGGA  300

seq1  GTATCCTCTACACAATTCAAAGCCCTCAAGTTTTGTAAGTCAAATCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTCTACACAATTCAAAGCCCTCAAGTTTTGTAAGTCAAATCATTT  350

seq1  ATCTGTTTCTAAGCACAGTGTAATGACCTTTCCTTATCTACTGGAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTCTAAGCACAGTGTAATGACCTTTCCTTATCTACTGGAGTTTG  400

seq1  ACATCTTCCTCCTCCTTCTGCTTTACCTGGGTAATTAATAATGAACAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCCTCCTCCTTCTGCTTTACCTGGGTAATTAATAATGAACAGAA  450

seq1  ATGTGTCGTCTGTGGTTCTGGAGGCTGAGCTGTCTAAGATGGAGGGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCGTCTGTGGTTCTGGAGGCTGAGCTGTCTAAGATGGAGGGATAT  500

seq1  ACCTAGTGAGGGCTTTCTTCTGTGTTATAGGTGGGGGAGGACATCACGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGTGAGGGCTTTCTTCTGTGTTATAGGTGGGGGAGGACATCACGGC  550

seq1  TAGAGGAGAAGGGAAGAGTTGGGGGGTGGGTAGG  584
      ||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGAAGGGAAGAGTTGGGGGGTGGGTAGG  584

seq1: chr19_29397558_29398270
seq2: B6Ng01-030P12.g_70_784 (reverse)

seq1  --TCCCCCCCCCCCCCCGCCAAGGCTTTAACCAGAGATTCAGCTCTGTGA  48
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCCCCCCCCCCCGCCAAGGCTTTAACCAGAGATTCAGCTCTGTGA  50

seq1  GCTGCACTCTGCATCCTGTAACCCCACTGTAAGCTCAAAGAAGGAAATCT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCACTCTGCATCCTGTAACCCCACTGTAAGCTCAAAGAAGGAAATCT  100

seq1  TTATGGGGGAGGATAATCCATGGTGTGTGGGGAAACTAATTGGCTCAGTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGGGAGGATAATCCATGGTGTGTGGGGAAACTAATTGGCTCAGTC  150

seq1  ACATTTCTGTAGTTTGAAATTAGAAGAGAAGGAGGAGGAGGAGGAGGAGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTGTAGTTTGAAATTAGAAGAGAAGGAGGAGGAGGAGGAGGAGG  200

seq1  AGGAAGAGGAGGAGAAAGCAGAGACAGAGGAGGAAGACGAGGTGGTGGAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGGAGGAGAAAGCAGAGACAGAGGAGGAAGACGAGGTGGTGGAG  250

seq1  GAGAAAGAGAGAGAGAGAAGGTGGAAGAAGGAGGGGAGGAGGAAGAGGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAGAGAGAGAAGGTGGAAGAAGGAGGGGAGGAGGAAGAGGAG  300

seq1  AAAGAGTGAGTTTCAAGACTGAAAAGATTGCATGAGGCTTGTCATAGAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGAGTTTCAAGACTGAAAAGATTGCATGAGGCTTGTCATAGAAT  350

seq1  AAAGGAACACAAATACAAATGGGCAAAAAGAAGGAGAGGGACGAGGAGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAACACAAATACAAATGGGCAAAAAGAAGGAGAGGGACGAGGAGGA  400

seq1  GGAAGAAAAGGGAAAGAAGGGAAATAGAGGAGGTCAGAGTCTGCGTGGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAAGGGAAAGAAGGGAAATAGAGGAGGTCAGAGTCTGCGTGGAT  450

seq1  TCTTGGCCTTTCTGAATCTATCACTGGGTCTTTCTTTCCAACCCCCACTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCCTTTCTGAATCTATCACTGGGTCTTTCTTTCCAACCCCCACTT  500

seq1  GCAGTGTGAGGTTTTGCCAGGCTCGCTCTGTCCCCTGAAGCTGGAGGGCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTGAGGTTTTGCCAGGCTCGCTCTGTCCCCTGAAGCTGGAGGGCG  550

seq1  TGGCTTCCCGTCCTTTTCTGCTATTACAGTGAGTAAGACAGAGTTATAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCCGTCCTTTTCTGCTATTACAGTGAGTAAGACAGAGTTATAAC  600

seq1  TAAACAAAAAAAGCAAAGATTAAAGGGAGCAAAATGCAGTAAGAAAAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAAAAAGCAAAGATTAAAGGGAGCAAAATGCAGTAAGAAAAGAG  650

seq1  GAAATAGTCTAGGTAATACATGGTTATTAATTCTGTAACATTTGAAATCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGTCTAGGTAATACATGGTTATTAATTCTGTAACATTTGAAATCA  700

seq1  AACAGAAATGAATTC  713
      |||||||||||||||
seq2  AACAGAAATGAATTC  715