BAC Information

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BAC

Clone NameB6Ng01-031I20
Chromosome19 (Build37)
Map Location 14,622,103 - 14,694,038
singlet/doubletdoublet
Overlap geneTle4
Upstream geneGA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433
Downstream geneEG433225, EG635497, Pomc-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031I20.bB6Ng01-031I20.g
ACCDH861132DH861133
length1,1241,109
definitionDH861132|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I20, 5' end.DH861133|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,692,901 - 14,694,038)(14,622,103 - 14,623,241)
sequence
gaattccttatcacattggactgaaaaatagtttctcaaaatttgacagg
aatggcagatgagcggtatagaaccagtgctgacagatgcaaatggctct
gtttgacagtgatctctctcttctgatgccagtgtgctttccagatgggt
gaagttcaccgcttcttgtagcatcgtacagaatgtcccaagagaaaagc
cctgaaagccactactgtgacatttttctaccacatccttcagaacttta
gcttcatggatgatacatagtttgaattccaagataccacaggctagagt
ttaagcaactctagcctgtggtatctccagatttgaactccatggtttga
aggctgtttccagaagcagggtgctctttttagaacaagcatattctggg
taaacacaacaaattcctgagcacagcagcttcatatggaagacttctcc
agaactgagagatgagctgcatccccagtggtactgagagcaaccccaca
tcatgtccaggtagtatgtaagagatgctcttgattagtcagttccattt
gctaagatcaaggggtagcagagtaacacattatggtcatttttgatact
tctgttctatttaaatttaactgaagatcaggaatgttatgtgtctttgt
cttttcagaatgggaatttaaatgttgatgagcatttgaaataaaatcta
gaaagagtctaatgaaaaagaatcagctaaacctcccaacagaataccat
cacttttaagaaaacgaattcacttgtatagaaaattcaatcctgttcag
tttgtttatatttaaatatgccatagccattcccagctgaagttgtcaca
taggcacacatattttcttttaaataaaaaaaatataaaaattcagataa
tagtcatattccataaaagcaatcttaatgttttgagctcacaatccgta
ttctgtgtgaatctgttgataaagatcagaaacactttaaactgtaagaa
tcatgaaaaaagtacatttactgttctgcactttgaaactgtagctatct
atggatggtatgttatatttacctctatgcacttttatatttggtgacta
gcgtgaccggtctttcgagtcttc
gaattcaacttccttatttctgttcacagtccatgaaacattcactgtcg
aagcacctttatgatataagcttgctgagacaaacaacgccacctctcct
gttagctctgaaagcaccaacagcactccaccattactcactccgctaca
tggtaagcgcgcatcaccacacagactggacacatccactaggtagtatg
gacattaaaactcaggcacaaagaggaggcaaaaaggccataaatgggag
aaggtaactcttgagaccgaaacccacactattccccaaagctggcccaa
caaggatatatgtatgttttttcatgctcagattgttagcaaacaaggtc
cctgactcagaaaattcataaagtgtttcacacatttttagaatgctgat
ggcttttccactctgccctcatttgattccagccccacttccggcttatc
ctgttaccacacctcaagtggtgacacagccactttagccccagccagtc
agcagaagggaaccgtcctctctgtttcagcagcaccaagcaaaatgtca
ctgaggaaagattaacaagcaaaggagatgactgggatttaagggaaaca
aaatatgcccaattatttattccttaaaatattaaaaattacactttaat
attttaaaaaaaactgtactgcaggaataactttatgactgcagagttac
tgaaaaccattgagttacatgtaaaataaaatgaacttatggtgtatgta
agaatactgtgatttaaagaatacaggtgttgctgggaggagggacaaaa
atctgtacactaaattattttcattgttacaaatgactttaatattaaga
aatgcatcagatgtttcttccatgaaattgaaaggatatagcccatgtag
tacatacacttactgataaacagacctttatgactagttatgtgagatag
ttttcactattttgagcagacgagaagatgtggtgtattaagaaagtata
acaaattgtacaacttgaaatttagatactgcccaacttggaagaaaata
ctggcgaatgcgagatgatctgattctacatgaaactcaaatttgctagc
tcgaataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14692901_14694038
seq2: B6Ng01-031I20.b_44_1167 (reverse)

seq1  GAAGACTCTGGAAAGAACAGGTCAACGCTAAGTCACCAAAAATATAAAAG  50
      ||||||||  ||||| || |||| ||||| |||||||  |||||||||||
seq2  GAAGACTC--GAAAG-ACCGGTC-ACGCT-AGTCACC--AAATATAAAAG  43

seq1  TGCATAGAGGTAAATATAACATACCCATCCATAGATAGCTACAGTTTTCA  100
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  TGCATAGAGGTAAATATAACATA-CCATCCATAGATAGCTACAG-TTTCA  91

seq1  AAGTGCAGAACAGTAAATGTAACTTTTATCATGATTCTAACAGTTTTAAA  150
      |||||||||||||||||||| |||||| |||||||||| |||| ||||||
seq2  AAGTGCAGAACAGTAAATGT-ACTTTTTTCATGATTCTTACAG-TTTAAA  139

seq1  GTGTATCTGATCTTTATCAAACAGATTCACACAGAATACGGATTGTGAGC  200
      |||| ||||||||||||| |||||||||||||||||||||||||||||| 
seq2  GTGTTTCTGATCTTTATC-AACAGATTCACACAGAATACGGATTGTGAG-  187

seq1  CTCAAAACATTAAGATTGCTTTTATGGAATATGACTATTATCTGAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAACATTAAGATTGCTTTTATGGAATATGACTATTATCTGAATTTT  237

seq1  TATATTTTTTTATTTAAAAAGAAAAATATGTGTGCCTATGTGACAACTTC  300
      |||||||||||  || ||||| ||||||||||||||||||||||||||||
seq2  TATATTTTTTTTATTTAAAAG-AAAATATGTGTGCCTATGTGACAACTTC  286

seq1  AGCTGGGAATGGCTATGGCATATTTAAATATAAACAAACTGAACAGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGAATGGCTATGGCATATTTAAATATAAACAAACTGAACAGGATT  336

seq1  GAATTTTCTATACAAGTGAATTCGTTTTCTTAAAAGTGATGGTATTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCTATACAAGTGAATTCGTTTTCTTAAAAGTGATGGTATTCTGT  386

seq1  TGGGAGGTTTAGCTGATTCTTTTTCATTAGACTCTTTCTAGATTTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTTTAGCTGATTCTTTTTCATTAGACTCTTTCTAGATTTTATTT  436

seq1  CAAATGCTCATCAACATTTAAATTCCCATTCTGAAAAGACAAAGACACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCTCATCAACATTTAAATTCCCATTCTGAAAAGACAAAGACACAT  486

seq1  AACATTCCTGATCTTCAGTTAAATTTAAATAGAACAGAAGTATCAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCCTGATCTTCAGTTAAATTTAAATAGAACAGAAGTATCAAAAAT  536

seq1  GACCATAATGTGTTACTCTGCTACCCCTTGATCTTAGCAAATGGAACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATAATGTGTTACTCTGCTACCCCTTGATCTTAGCAAATGGAACTGA  586

seq1  CTAATCAAGAGCATCTCTTACATACTACCTGGACATGATGTGGGGTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAAGAGCATCTCTTACATACTACCTGGACATGATGTGGGGTTGCT  636

seq1  CTCAGTACCACTGGGGATGCAGCTCATCTCTCAGTTCTGGAGAAGTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTACCACTGGGGATGCAGCTCATCTCTCAGTTCTGGAGAAGTCTTC  686

seq1  CATATGAAGCTGCTGTGCTCAGGAATTTGTTGTGTTTACCCAGAATATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAAGCTGCTGTGCTCAGGAATTTGTTGTGTTTACCCAGAATATGC  736

seq1  TTGTTCTAAAAAGAGCACCCTGCTTCTGGAAACAGCCTTCAAACCATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTAAAAAGAGCACCCTGCTTCTGGAAACAGCCTTCAAACCATGGA  786

seq1  GTTCAAATCTGGAGATACCACAGGCTAGAGTTGCTTAAACTCTAGCCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATCTGGAGATACCACAGGCTAGAGTTGCTTAAACTCTAGCCTGT  836

seq1  GGTATCTTGGAATTCAAACTATGTATCATCCATGAAGCTAAAGTTCTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTTGGAATTCAAACTATGTATCATCCATGAAGCTAAAGTTCTGAA  886

seq1  GGATGTGGTAGAAAAATGTCACAGTAGTGGCTTTCAGGGCTTTTCTCTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGTAGAAAAATGTCACAGTAGTGGCTTTCAGGGCTTTTCTCTTG  936

seq1  GGACATTCTGTACGATGCTACAAGAAGCGGTGAACTTCACCCATCTGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTCTGTACGATGCTACAAGAAGCGGTGAACTTCACCCATCTGGAA  986

seq1  AGCACACTGGCATCAGAAGAGAGAGATCACTGTCAAACAGAGCCATTTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTGGCATCAGAAGAGAGAGATCACTGTCAAACAGAGCCATTTGC  1036

seq1  ATCTGTCAGCACTGGTTCTATACCGCTCATCTGCCATTCCTGTCAAATTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCAGCACTGGTTCTATACCGCTCATCTGCCATTCCTGTCAAATTT  1086

seq1  TGAGAAACTATTTTTCAGTCCAATGTGATAAGGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAACTATTTTTCAGTCCAATGTGATAAGGAATTC  1124

seq1: chr19_14622103_14623241
seq2: B6Ng01-031I20.g_68_1176

seq1  GAATTCAACTTCCTTATTTCTGTTCACAGTCCATGAAACATTCACTGTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTCCTTATTTCTGTTCACAGTCCATGAAACATTCACTGTCG  50

seq1  AAGCACCTTTATGATATAAGCTTGCTGAGACAAACAACGCCACCTCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTTTATGATATAAGCTTGCTGAGACAAACAACGCCACCTCTCCT  100

seq1  GTTAGCTCTGAAAGCACCAACAGCACTCCACCATTACTCACTCCGCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTCTGAAAGCACCAACAGCACTCCACCATTACTCACTCCGCTACA  150

seq1  TGGTAAGCGCGCATCACCACACAGACTGGACACATCCACTAGGTAGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGCGCGCATCACCACACAGACTGGACACATCCACTAGGTAGTATG  200

seq1  GACATTAAAACTCAGGCACAAAGAGGAGGCAAAAAGGCCATAAATGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTAAAACTCAGGCACAAAGAGGAGGCAAAAAGGCCATAAATGGGAG  250

seq1  AAGGTAACTCTTGAGACCGAAACCCACACTATTCCCCAAAGCTGGCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAACTCTTGAGACCGAAACCCACACTATTCCCCAAAGCTGGCCCAA  300

seq1  CAAGGATATATGTATGTTTTTTCATGCTCAGATTGTTAGCAAACAAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATATATGTATGTTTTTTCATGCTCAGATTGTTAGCAAACAAGGTC  350

seq1  CCTGACTCAGAAAATTCATAAAGTGTTTCACACATTTTTAGAATGCTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTCAGAAAATTCATAAAGTGTTTCACACATTTTTAGAATGCTGAT  400

seq1  GGCTTTTCCACTCTGCCCTCATTTGATTCCAGCCCCACTTCCGGCTTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTCCACTCTGCCCTCATTTGATTCCAGCCCCACTTCCGGCTTATC  450

seq1  CTGTTACCACACCTCAAGTGGTGACACAGCCACTTTAGCCCCAGCCAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACCACACCTCAAGTGGTGACACAGCCACTTTAGCCCCAGCCAGTC  500

seq1  AGCAGAAGGGAACCGTCCTCTCTGTTTCAGCAGCACCAAGCAAAATGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGGGAACCGTCCTCTCTGTTTCAGCAGCACCAAGCAAAATGTCA  550

seq1  CTGAGGAAAGATTAACAAGCAAAGGAGATGACTGGGATTTAAGGGAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAAAGATTAACAAGCAAAGGAGATGACTGGGATTTAAGGGAAACA  600

seq1  AAATATGCCCAATTATTTATTCCTTAAAATATTAAAAATTACACTTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGCCCAATTATTTATTCCTTAAAATATTAAAAATTACACTTTAAT  650

seq1  ATTTTAAAAAAAACTGTACTGCAGGAATAACTTTATGACTGCAGAGTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAAAAACTGTACTGCAGGAATAACTTTATGACTGCAGAGTTAC  700

seq1  TGAAAACCATTGAGTTACATGTAAAATAAAATGAACTTATGGTGTATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACCATTGAGTTACATGTAAAATAAAATGAACTTATGGTGTATGTA  750

seq1  AGAATACTGTGATTTAAAGAATACAGGTGTTGCTGGGAGGAGGGACAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACTGTGATTTAAAGAATACAGGTGTTGCTGGGAGGAGGGACAAAA  800

seq1  ATCTGTACACTAAATTATTTTCATTGTTACAAAATGACTTTTAATATTAA  850
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  ATCTGTACACTAAATTATTTTCATTGTTAC-AAATGAC-TTTAATATTAA  848

seq1  GAAATGCATCAGATGTTTCTTCCATGAAATTGAAAGGATATAAGCCCATG  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAAATGCATCAGATGTTTCTTCCATGAAATTGAAAGGATAT-AGCCCATG  897

seq1  TAGGTACAATACAACTTACTGATAAACAGACCTTTATGAACTAGTTATGT  950
      || |||| |||| ||||||||||||||||||||||||| |||||||||||
seq2  TA-GTAC-ATAC-ACTTACTGATAAACAGACCTTTATG-ACTAGTTATGT  943

seq1  GAAGAATAGGTTTTTCACTATTTTGAGGCAGACGAG-AGATGTGGTGTTA  999
      ||   ||||  ||||||||||||||| ||||||||| |||||||||| ||
seq2  GA--GATAG--TTTTCACTATTTTGA-GCAGACGAGAAGATGTGGTG-TA  987

seq1  ATAAGAAAAGTAATAACAAAATTGTTACAACTTGAAAATTTTAAGAATTA  1049
       |||| ||||| ||||| |||||| ||||||||||||   || |||  ||
seq2  TTAAG-AAAGT-ATAAC-AAATTG-TACAACTTGAAA---TTTAGA--TA  1028

seq1  CTGCCCATACTGGAAGAAAAAATACTGGCAGAAATGCAAAGATGATCAGA  1099
      |||||||   ||||||  |||||||||||   |||||  |||||||| ||
seq2  CTGCCCAACTTGGAAG--AAAATACTGGC--GAATGC-GAGATGATCTGA  1073

seq1  TTCTTACAATGAACACCATATTGCTAGCTACAGAAATAAA  1139
      ||| ||||   ||| | |  |||||||||     ||||||
seq2  TTC-TACATGAAACTCAAATTTGCTAGCT---CGAATAAA  1109