BAC Information

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BAC

Clone NameB6Ng01-033C06
Chromosome19 (Build37)
Map Location 13,390,649 - 13,541,687
singlet/doubletdoublet
Overlap geneOlfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1
Upstream geneOlfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465
Downstream geneOlfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033C06.bB6Ng01-033C06.g
ACCDH862278DH862279
length1,0011,095
definitionDH862278|Mus musculus domesticus DNA, BAC clone: B6Ng01-033C06, 5' end.DH862279|Mus musculus domesticus DNA, BAC clone: B6Ng01-033C06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,540,677 - 13,541,687)(13,390,649 - 13,391,772)
sequence
gaattccaataaagatttatgtaccaaacatttttggtaatgaatacgta
ctatttatttgatctttttcaaatacaatgcaagaagaagagcaatgaga
acaaacatcacattagctttgagactgataataagactaaaccctaagtg
ttcccataaacagctcacttctcagtgatagtctgaatttctattcttct
cttttcttaattcctttctcactcctttatccgttctgttacccacttcc
aaataaataaatgaactcaaatcacaggcttgaggttagtatctagggac
cttacataattctttagacaaaatctaatgctctttaatagttaggcgac
ttttacatctgatcaaatttaccgtggaaagaattattccaggtcaataa
gagccatttttttttaaaggaagtgaatggagttttgaggttgatagaaa
aaaattgtctttagacttccaaacacaatcacatgtgaaacaacactccc
cttcacgcagaacatgtacctgcacaaatagtactggtctgattgatgag
taacactgggtacattgcacatgctctggttcatgactccacacccatat
acatatgataggaactcaataaacttattataagtaatggaagatgtcat
aaagtttggtcattctggcagagatctggtgagacatagagaatggaaga
atgggatagatataataatttattgtgtatgtttttgaaatttctcaccc
tatccccaattttatcctccctaacatattctccttgcaagtttttattc
tttctctttctcttgtattcttttacaaatgtgtcattattgaagggcat
ctatgtaccactttcttttcacaaatattacactgaagcttgagacattg
aattgccaacccagacaatatgtcatcaggaaaagaatagattgggatta
atgacaagactcagcacagattgtaactatattgcctcattgacaaagga
a
gaattctttcagaatggctgcaacataaatcatgtttttgtttgcattga
agcttttgatataatatttactttaaaaatgattattacctaccccaagt
ctcttgatatcctagaaattttaggttacaaactattattatagagacta
ttttcagaaaatattatccacaattaacaaggaatttacacatgatgaat
aattttctgttatttttagtaatacttgttatgttatcattgatgaaact
tggaaattaaaatgttacaacatagtataaagttattttttatcatgaaa
aatattcagagcattttaatccttataccaatattaaactcatcattttc
aaactatgtaatgatcatctctctataattatagcaaaaatgttaaaatg
gatatatgatcgtgaattttactcttcttgttttctctatgcttcttcat
aaccaataataagattagaaaagtattcacagtgattcagaatatcttgg
ttttagtttttgttttgtttgttttttgttttgttaactactgtgttaag
agaataggtaaacttcctaaaatagaactttttgcctttgtatcataaac
ttcctccagtctttgttttagaaaagatttccatgatccccttttccctt
aacatatatcacaataggcacttctaccccactccctttctcactgagaa
tgtttatttaatatacatgaagagccaccaattctttggaagaagagagt
aaaaccaattgtgtggacatgacataatcaagtaaaccttagagtgctgg
ttacacagttcttcctcagggagtgcactaacactttcatgttctctaaa
catgaaatcagaagaaatagagaaaataagctttgacttttgaacctaaa
ttcttcctttctcaaggatgggttacacatttgccttacctacaacagaa
aatgagagatggatatctcataaatatatcccttgtgcttaaaaacatgc
tacatgacatcaacaaataatatgtcatatagcattacttcatgattttc
taatattctgagataaagaagattttatccaattggttctgaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13540677_13541687
seq2: B6Ng01-033C06.b_48_1048 (reverse)

seq1  TTCCTTTGTCAATGATGGCAATAATAGTTACAAATCTGTGCTGAGGTCTT  50
      ||||||||||||||| |||||| |||||||| |||||||||||| |||||
seq2  TTCCTTTGTCAATGA-GGCAAT-ATAGTTAC-AATCTGTGCTGA-GTCTT  46

seq1  GTCATTTAATTCCAAATCTTATTCCTTTTTCCTGATGACATATTGTCTGG  100
      ||||||  | ||| |||| |||||  ||||||||||||||||||||||||
seq2  GTCATT--AATCCCAATC-TATTC--TTTTCCTGATGACATATTGTCTGG  91

seq1  GTTGGCCAATTCAATGTCTCCAAGCTTCAGTGTAATATTTGTGAAAAGAA  150
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTTGG-CAATTCAATGTCT-CAAGCTTCAGTGTAATATTTGTGAAAAGAA  139

seq1  AGTGGTACATAGATGCCCTTCAATAATGACACATTTGTAAAAGAATACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTACATAGATGCCCTTCAATAATGACACATTTGTAAAAGAATACAA  189

seq1  GAGAAAGAGAAAGAATAAAAACTTGCAAGGAGAATATGTTAGGGAGGAT-  249
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAGAAAGAGAAAGAATAAAAACTTGCAAGGAGAATATGTTAGGGAGGATA  239

seq1  AAATTGGGGATAGGGTGAGAAATTTCAAAAACATACACAATAAATTATTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGGGATAGGGTGAGAAATTTCAAAAACATACACAATAAATTATTA  289

seq1  TATCTATCCCATTCTTCCATTCTCTATGTCTCACCAGATCTCTGCCAGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCCCATTCTTCCATTCTCTATGTCTCACCAGATCTCTGCCAGAA  339

seq1  TGACCAAACTTTATGACATCTTCCATTACTTATAATAAGTTTATTGAGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAACTTTATGACATCTTCCATTACTTATAATAAGTTTATTGAGTT  389

seq1  CCTATCATATGTATATGGGTGTGGAGTCATGAACCAGAGCATGTGCAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCATATGTATATGGGTGTGGAGTCATGAACCAGAGCATGTGCAATG  439

seq1  TACCCAGTGTTACTCATCAATCAGACCAGTACTATTTGTGCAGGTACATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGTGTTACTCATCAATCAGACCAGTACTATTTGTGCAGGTACATG  489

seq1  TTCTGCGTGAAGGGGAGTGTTGTTTCACATGTGATTGTGTTTGGAAGTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCGTGAAGGGGAGTGTTGTTTCACATGTGATTGTGTTTGGAAGTCT  539

seq1  AAAGACAATTTTTTTCTATCAACCTCAAAACTCCATTCACTTCCTTTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAATTTTTTTCTATCAACCTCAAAACTCCATTCACTTCCTTTAAA  589

seq1  AAAAAATGGCTCTTATTGACCTGGAATAATTCTTTCCACGGTAAATTTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGGCTCTTATTGACCTGGAATAATTCTTTCCACGGTAAATTTGA  639

seq1  TCAGATGTAAAAGTCGCCTAACTATTAAAGAGCATTAGATTTTGTCTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGTAAAAGTCGCCTAACTATTAAAGAGCATTAGATTTTGTCTAAA  689

seq1  GAATTATGTAAGGTCCCTAGATACTAACCTCAAGCCTGTGATTTGAGTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGTAAGGTCCCTAGATACTAACCTCAAGCCTGTGATTTGAGTTC  739

seq1  ATTTATTTATTTGGAAGTGGGTAACAGAACGGATAAAGGAGTGAGAAAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTGGAAGTGGGTAACAGAACGGATAAAGGAGTGAGAAAGG  789

seq1  AATTAAGAAAAGAGAAGAATAGAAATTCAGACTATCACTGAGAAGTGAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAAAAGAGAAGAATAGAAATTCAGACTATCACTGAGAAGTGAGC  839

seq1  TGTTTATGGGAACACTTAGGGTTTAGTCTTATTATCAGTCTCAAAGCTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGGGAACACTTAGGGTTTAGTCTTATTATCAGTCTCAAAGCTAA  889

seq1  TGTGATGTTTGTTCTCATTGCTCTTCTTCTTGCATTGTATTTGAAAAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTTGTTCTCATTGCTCTTCTTCTTGCATTGTATTTGAAAAAGA  939

seq1  TCAAATAAATAGTACGTATTCATTACCAAAAATGTTTGGTACATAAATCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAAATAGTACGTATTCATTACCAAAAATGTTTGGTACATAAATCT  989

seq1  TTATTGGAATTC  1011
      ||||||||||||
seq2  TTATTGGAATTC  1001

seq1: chr19_13390649_13391772
seq2: B6Ng01-033C06.g_64_1158

seq1  GAATTCTTTCAGAATGGCTGCAACATAAATCATGTTTTTGTTTGCATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGAATGGCTGCAACATAAATCATGTTTTTGTTTGCATTGA  50

seq1  AGCTTTTGATATAATATTTACTTTAAAAATGATTATTACCTACCCCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTGATATAATATTTACTTTAAAAATGATTATTACCTACCCCAAGT  100

seq1  CTCTTGATATCCTAGAAATTTTAGGTTACAAACTATTATTATAGAGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATATCCTAGAAATTTTAGGTTACAAACTATTATTATAGAGACTA  150

seq1  TTTTCAGAAAATATTATCCACAATTAACAAGGAATTTACACATGATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAAAATATTATCCACAATTAACAAGGAATTTACACATGATGAAT  200

seq1  AATTTTCTGTTATTTTTAGTAATACTTGTTATGTTATCATTGATGAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTGTTATTTTTAGTAATACTTGTTATGTTATCATTGATGAAACT  250

seq1  TGGAAATTAAAATGTTACAACATAGTATAAAGTTATTTTTTATCATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTAAAATGTTACAACATAGTATAAAGTTATTTTTTATCATGAAA  300

seq1  AATATTCAGAGCATTTTAATCCTTATACCAATATTAAACTCATCATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAGAGCATTTTAATCCTTATACCAATATTAAACTCATCATTTTC  350

seq1  AAACTATGTAATGATCATCTCTCTATAATTATAGCAAAAATGTTAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATGTAATGATCATCTCTCTATAATTATAGCAAAAATGTTAAAATG  400

seq1  GATATATGATCGTGAATTTTACTCTTCTTGTTTTCTCTATGCTTCTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGATCGTGAATTTTACTCTTCTTGTTTTCTCTATGCTTCTTCAT  450

seq1  AACCAATAATAAGATTAGAAAAGTATTCACAGTGATTCAGAATATCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATAATAAGATTAGAAAAGTATTCACAGTGATTCAGAATATCTTGG  500

seq1  TTTTAGTTTTTGTTTTGTTTGTTTTTTGTTTTGTTAACTACTGTGTTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTTTTGTTTTGTTTGTTTTTTGTTTTGTTAACTACTGTGTTAAG  550

seq1  AGAATAGGTAAACTTCCTAAAATAGAACTTTTTGCCTTTGTATCATAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGTAAACTTCCTAAAATAGAACTTTTTGCCTTTGTATCATAAAC  600

seq1  TTCCTCCAGTCTTTGTTTTAGAAAAGATTTCCATGATCCCCTTTTCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCAGTCTTTGTTTTAGAAAAGATTTCCATGATCCCCTTTTCCCTT  650

seq1  AACATATATCACAATAGGCACTTCTACCCCACTCCCTTTCTCACTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATATCACAATAGGCACTTCTACCCCACTCCCTTTCTCACTGAGAA  700

seq1  TGTTTATTTAATATACATGAAGAGCCACCAATTCTTTGGAAGAAGAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTAATATACATGAAGAGCCACCAATTCTTTGGAAGAAGAGAGT  750

seq1  AAAACCAATTGTGTGGACATGACATAATCAAGTAAACCTTAGAGTGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAATTGTGTGGACATGACATAATCAAGTAAACCTTAGAGTGCTGG  800

seq1  TTACACAGTTCTTCCTCAGGGAGTGCACTAACACTTTCATGTTCTCTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTACACAGTTCTTCCTCAGGGAGTGCACTAACACTTTCATGTTCTCT-AA  849

seq1  ACATGAAAATCAGAAGAAATAGAGAAAATAAGCTTTGACTTTTGAACCTA  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATG-AAATCAGAAGAAATAGAGAAAATAAGCTTTGACTTTTGAACCTA  898

seq1  AATTCTTCCTTTCTCAAGGATGGGTTACACATTTGCCTTACCTACAAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATTCTTCCTTTCTCAAGGATGGGTTACACATTTGCCTTACCTAC-AACA  947

seq1  GAAAAATGAGAAGATTGAATATCTCATAAATATTATCCCTTGTGCCTTAA  1000
      | |||||||| ||| || |||||||||||||| ||||||||||| |||||
seq2  G-AAAATGAG-AGA-TGGATATCTCATAAATA-TATCCCTTGTG-CTTAA  992

seq1  AAAACAATGTCTACATGACATCATACAAATAAATATGTCAATATAGCATT  1050
      |||   ||| ||||||||||||| |||||| |||||||| ||||||||||
seq2  AAA--CATG-CTACATGACATCA-ACAAAT-AATATGTC-ATATAGCATT  1036

seq1  TACCTTCAAATGATTTTTCTTAAATATTCATGAAGATTAACAGAAGATCT  1100
         ||||  |||| ||||||  ||||||| || ||||  | ||||||| |
seq2  --ACTTC--ATGA-TTTTCT--AATATTC-TG-AGAT--AAAGAAGAT-T  1074

seq1  TTAGTCCAATTGTGTTCATGAAAG  1124
      ||| |||||||| |||| ||||||
seq2  TTA-TCCAATTG-GTTC-TGAAAG  1095