BAC Information

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BAC

Clone NameB6Ng01-037K14
Chromosome19 (Build37)
Map Location 12,021,969 - 12,151,217
singlet/doubletdoublet
Overlap geneOsbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425
Upstream geneCcdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086
Downstream geneOlfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037K14.bB6Ng01-037K14.g
ACCDH865454DH865455
length768490
definitionDH865454|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K14, 5' end.DH865455|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,150,452 - 12,151,217)(12,021,969 - 12,022,463)
sequence
gaattcaatagtgaaacatttatcgatgatgtaatgaggcaagaagttgc
attacaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaaaataaagagagcctcctat
caaagctccaagcacccctccattagtccactgcactccatttttctgtg
atttctgggtggctgtgccatttcaccactgtttgatattatttcccttc
ctctcctgttgaaatttatccagacagtgacaaattcttgtctccactgt
taaagcttaaagtttcctataactgccctaaatagagccctgtgctttca
tgacactaggatataattggttgatcccacaactgttgtcacactaaata
tctgtattttcatcagactgaatactgctccagaataacacctttgctac
acctttgtgcaatgtagctagcctacgtctagtcccaactgtacaataag
gaccacaaccaatgtgtgaaaaattactggactcattgattaaatgtata
cttttgaaaagcctaataaactttggtgtcatgaatacaatcaaacctaa
tttagagaaatccagatcactttattgaacatcagtttttgctgcacaat
cttagggggctgcagatgtgtgggagagtggaaaaggtagatgatgtatc
caagtctatctgggaaacgtcatgactttctaataaataaccagtcagga
agcattttttctgggatc
atggtcagccaggaatacatgagaccttgtctcaaaggggaaaaacagct
aaaatatctgacacttgataaaccaagataaaactaaaagttataaatta
ttaaatggaaatctcgatgccaagggtgggcaactcatgcactgttaata
agggagttccctgaggccctaaatagtccattcctactgctatttgttgt
caccagaactgggttgtaagaccctatttctgaaggtgatttggtctcaa
gacataaatcaagctggaagtttccctgggtgttagctagatttcatagc
cctaggagaggctgtgcaagcagcagaaaactgtcatcagttgtcttcag
tcagctgtggaccctaactccaatacagaccaactaggcaagctgaacca
ctattggtacaatgtggtaggtgtgttaatggaggtaggcaacccctctc
ctcttggaattgatgtttcccaccacaggtgagtatttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12150452_12151217
seq2: B6Ng01-037K14.b_47_814 (reverse)

seq1  GATACCAGAAAAAATGCTTCCTGACTGGTTATTTATTAGAAAAGTCATGA  50
      ||| ||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GATCCCAGAAAAAATGCTTCCTGACTGGTTATTTATTAG-AAAGTCATGA  49

seq1  CGTTT-CCAGATAGACTTGGATACATCATCTACC-TTTCCACTCTCCCAC  98
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  CGTTTCCCAGATAGACTTGGATACATCATCTACCTTTTCCACTCTCCCAC  99

seq1  ACATCTGCAGCCCCCTAAGATTGTGCAGCAAAAACTGATGTTCAATAAAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGCAGCCCCCTAAGATTGTGCAGCAAAAACTGATGTTCAATAAAG  149

seq1  TGATCTGGATTTCTCTAAATTAGGTTTGATTGTATTCATGACACC-AAGT  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGATCTGGATTTCTCTAAATTAGGTTTGATTGTATTCATGACACCAAAGT  199

seq1  TTATTAGGCTTTTCAAAAGTATACATTTAATCAATGAGTCCAGTAATTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGGCTTTTCAAAAGTATACATTTAATCAATGAGTCCAGTAATTTT  249

seq1  TCACACATTGGTTGTGGTCCTTATTGTACAGTTGGGACTAGACGTAGGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACATTGGTTGTGGTCCTTATTGTACAGTTGGGACTAGACGTAGGCT  299

seq1  AGCTACATTGCACAAAGGTGTAGCAAAGGTGTTATTCTGGAGCAGTATTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATTGCACAAAGGTGTAGCAAAGGTGTTATTCTGGAGCAGTATTC  349

seq1  AGTCTGATGAAAATACAGATATTTAGTGTGACAACAGTTGTGGGATCAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGATGAAAATACAGATATTTAGTGTGACAACAGTTGTGGGATCAAC  399

seq1  CAATTATATCCTAGTGTCATGAAAGCACAGGGCTCTATTTAGGGCAGTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATATCCTAGTGTCATGAAAGCACAGGGCTCTATTTAGGGCAGTTA  449

seq1  TAGGAAACTTTAAGCTTTAACAGTGGAGACAAGAATTTGTCACTGTCTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAACTTTAAGCTTTAACAGTGGAGACAAGAATTTGTCACTGTCTGG  499

seq1  ATAAATTTCAACAGGAGAGGAAGGGAAATAATATCAAACAGTGGTGAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTCAACAGGAGAGGAAGGGAAATAATATCAAACAGTGGTGAAAT  549

seq1  GGCACAGCCACCCAGAAATCACAGAAAAATGGAGTGCAGTGGACTAATGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGCCACCCAGAAATCACAGAAAAATGGAGTGCAGTGGACTAATGG  599

seq1  AGGGGTGCTTGGAGCTTTGATAGGAGGCTCTCTTTATTTTCTTTCTTTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGCTTGGAGCTTTGATAGGAGGCTCTCTTTATTTTCTTTCTTTCT  649

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  699

seq1  CTTTCTTTCTTTTTGTAATGCAACTTCTTGCCTCATTACATCATCGATAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTTTGTAATGCAACTTCTTGCCTCATTACATCATCGATAA  749

seq1  ATGTTTCACTATTGAATTC  766
      |||||||||||||||||||
seq2  ATGTTTCACTATTGAATTC  768

seq1: chr19_12021969_12022463
seq2: B6Ng01-037K14.g_69_564

seq1  GAATTCATGGCCAGCCAGGAATACATGAGACCTTGTCTCAAAGGGGAAAA  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTCAGCCAGGAATACATGAGACCTTGTCTCAAAGGGGAAAA  50

seq1  ACAGCAAAAATATCTGACACTTGATAAACCAAGATAAAACTAAAAGTTAT  100
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAAAATATCTGACACTTGATAAACCAAGATAAAACTAAAAGTTAT  100

seq1  AAATTATTAAATGGAAATCTCGATGCCAAGGGTGGGCAACTCATGCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTAAATGGAAATCTCGATGCCAAGGGTGGGCAACTCATGCACTG  150

seq1  TTAATAAGGGAGTTCCCTGAGGCCCTAAATAGTCCATTCCTACTGCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGGGAGTTCCCTGAGGCCCTAAATAGTCCATTCCTACTGCTATT  200

seq1  TGTTGTCACCAGAACTGGGTTGTAAGACCCTATTTCTGAAGGTGATTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCACCAGAACTGGGTTGTAAGACCCTATTTCTGAAGGTGATTTGG  250

seq1  TCTCAAGACATAAATCAAGCTGGAAGTTTCCCTGGGTGTTAGCTAGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGACATAAATCAAGCTGGAAGTTTCCCTGGGTGTTAGCTAGATTT  300

seq1  CATAGCCCTAGGAGAGGCTGTGCAAGCAGCAGAAAACTGTCATCAGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCCTAGGAGAGGCTGTGCAAGCAGCAGAAAACTGTCATCAGTTGT  350

seq1  CTTCAGTCAGCTGTGGACCCTAACTCCAATACAGACCAACTAGGCAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCAGCTGTGGACCCTAACTCCAATACAGACCAACTAGGCAAGCT  400

seq1  GAACCACTATTGGTACAATGTGGTAGGTGTGTTAATGGAGGTAGGCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACTATTGGTACAATGTGGTAGGTGTGTTAATGGAGGTAGGCAACC  450

seq1  CCTCTCCTCTTGGAATTGATG-TTCCCACCACAGGTGAGTATTTAC  495
      ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTCTCCTCTTGGAATTGATGTTTCCCACCACAGGTGAGTATTTAC  496