BAC Information

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BAC

Clone NameB6Ng01-038G08
Chromosome19 (Build37)
Map Location 12,246,309 - 12,247,449
singlet/doubletsinglet
Overlap genenone
Upstream geneMs4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1
Downstream geneOlfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038G08.bB6Ng01-038G08.g
ACCDH865967DH865968
length1,130715
definitionDH865967|Mus musculus domesticus DNA, BAC clone: B6Ng01-038G08, 5' end.DH865968|Mus musculus domesticus DNA, BAC clone: B6Ng01-038G08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaagacaagaaaactttattttataaactcttagcacgcagta
catatatatatatatatacatatatatatatatatgcatatatatataca
cagatatatatgtatatatacttttaaaagcaaaattttaaaaagatgaa
atgtatatatgttgtaataaactatcattaatgttaagtataaataacat
ggtagttttgactgtatgagtcaaattactaacatttatattaaaatcgt
gtggttatttaatttgttcagcacatattaaatgcatatgtgaagctggg
cattattctgataccaaacaaaccaagttcagcaattagtgactaaaaat
aaggtgaccaagagtatgctgtaaaatcatctttctcatttagaaaccta
aagagacagatttttaaaaatatttttattaggtattttcttcatttaca
ttttcaatgatattccaaaagtcccccataccctccccccactcccctac
ccacccactcccactttttggccctggcattcccctgtactggggcatat
aaagtttgcaagtccaatgggcctctctttccagtgatggcagactaggc
catcttttgataaatatgcagctagagtcaagagctccggggtactggtt
agttcataatgttgtttcacctatagggttgcagatcccgttagctcctt
gggtactttctctagctcctccattgggggccctgtgatccatccaatag
ctgactgtgagcatccacttctgtgtttgctaggccccggcatagtctca
caagagagagctctatctgggtcctttcagcaaaattgctagtgtgtgca
atggtgtcagcgtttggaagctgattatgggatggatctccagatatggc
agtctctagatggtccatcctttcgtcacagctagagacagattataaca
tcacagaaagaatatgaattgtgagactccacctttctactgtgatctta
agatctctgacttaggaaataaccttttgagatgagagaggcgcaggtta
aactcaccttcaccaagatgcgctagtagtcagctatcatttcttaagat
ggctgaagaattagctgataagtcaaaaaa
gaattcctcagaactcaggtgagttctgtttagttctatatcccattttt
aaaaatagtgttatttggttctctggagtcaaacttcttgagttctttgt
atatattggatattacccctctacccaatgtaggattggtaaagatcttt
tcccaatcatgggttgccgttttgtcctactgacagtgtcttttgcctta
cggaggcttttccattttacgaggtcccatttgttgatttttgatcttag
agcataagccactggtgttctgttcaggaaattttctcctgtacccaagt
gttcgaggctcttccccactttcttttctattagattcatctgattttat
gtagaggtccttgatccacttggacttgagctttgtacaaggagatagga
atggagcaatttaaattcttctatatactaagcaccagttgagccagcac
catttgttgaaaatacggtctttttttttctactggatggttttagctcc
tttgtcaaagatcaactaatctgcaaccctataggtggaacaacattatg
aactaaccagtaccctggagctcttgactctagctgcatatgtatcaaaa
gatggcctagtcggccatcactggaaagagaggcccattggacacgcaaa
ctttatctgccccagtacaggggaacgccagggccaaaaagggggagtgg
gtgagtaggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12246309_12247449
seq2: B6Ng01-038G08.b_46_1175

seq1  GAATTCCAAAGACAAGAAAACTTTATTTTATAAACTCTTAGCACGCAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGACAAGAAAACTTTATTTTATAAACTCTTAGCACGCAGTA  50

seq1  CATATATATATATATATACATATATATATATATATGCATATATATATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATATATACATATATATATATATATGCATATATATATACA  100

seq1  CAGATATATATGTATATATACTTTTAAAAGCAAAATTTTAAAAAGATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATATATGTATATATACTTTTAAAAGCAAAATTTTAAAAAGATGAA  150

seq1  ATGTATATATGTTGTAATAAACTATCATTAATGTTAAGTATAAATAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATATGTTGTAATAAACTATCATTAATGTTAAGTATAAATAACAT  200

seq1  GGTAGTTTTGACTGTATGAGTCAAATTACTAACATTTATATTAAAATCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTTTGACTGTATGAGTCAAATTACTAACATTTATATTAAAATCGT  250

seq1  GTGGTTATTTAATTTGTTCAGCACATATTAAATGCATATGTGAAGCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATTTAATTTGTTCAGCACATATTAAATGCATATGTGAAGCTGGG  300

seq1  CATTATTCTGATACCAAACAAACCAAGTTCAGCAATTAGTGACTAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTCTGATACCAAACAAACCAAGTTCAGCAATTAGTGACTAAAAAT  350

seq1  AAGGTGACCAAGAGTATGCTGTAAAATCATCTTTCTCATTTAGAAACCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGACCAAGAGTATGCTGTAAAATCATCTTTCTCATTTAGAAACCTA  400

seq1  AAGAGACAGATTTTTAAAAATATTTTTATTAGGTATTTTCTTCATTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACAGATTTTTAAAAATATTTTTATTAGGTATTTTCTTCATTTACA  450

seq1  TTTTCAATGATATTCCAAAAGTCCCCCATACCCTCCCCCCACTCCCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATGATATTCCAAAAGTCCCCCATACCCTCCCCCCACTCCCCTAC  500

seq1  CCACCCACTCCCACTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACTCCCACTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATAT  550

seq1  AAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCAGACTAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCAGACTAGGC  600

seq1  CATCTTTTGATAAATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTGATAAATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTT  650

seq1  AGTTCATAATGTTGTTTCACCTATAGGGTTGCAGATCCCGTTAGCTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATAATGTTGTTTCACCTATAGGGTTGCAGATCCCGTTAGCTCCTT  700

seq1  GGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAG  750

seq1  CTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCA  800

seq1  CAAGAGAGAGCTCTATCTGGGTCCTTTCAGCAAAATTGCTAGTGTGTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGAGCTCTATCTGGGTCCTTTCAGCAAAATTGCTAGTGTGTGCA  850

seq1  ATGGTGTCAGCGTTTGGAAGCTGATTATGGGATGGATCCCCAGATATGGC  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGGTGTCAGCGTTTGGAAGCTGATTATGGGATGGATCTCCAGATATGGC  900

seq1  AGTCTCTAGATGGTCCATCCTTTCGTCACAGCTAAGAGACAGATTTATAA  950
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  AGTCTCTAGATGGTCCATCCTTTCGTCACAGCT-AGAGACAGA-TTATAA  948

seq1  CATCACAGAAAGAATATGAA-TGTGAGACTCCAACCTTTCTACTGTGAAT  999
      |||||||||||||||||||| ||||||||||| |||||||||||||| ||
seq2  CATCACAGAAAGAATATGAATTGTGAGACTCC-ACCTTTCTACTGTG-AT  996

seq1  CTTAAGATCTCTGACTTAGGAAAATAACCTTTAGAGATGAGAGAAGGACG  1049
      |||||||||||||||||||| ||||||||||| |||||||||||  | ||
seq2  CTTAAGATCTCTGACTTAGG-AAATAACCTTTTGAGATGAGAGA--GGCG  1043

seq1  CA-GTTAAACTCACCTTTCAGCAAAGATGCGCTAGTAGTCAGCTATCCAT  1098
      || |||||||||||| |||| | ||||||||||||||||||||||| |||
seq2  CAGGTTAAACTCACC-TTCA-CCAAGATGCGCTAGTAGTCAGCTAT-CAT  1090

seq1  TTCTATGAGATGCCTGACAGAATTAGCTGATAAAGTCATAAAA  1141
      |||| | ||||| |||| ||||||||||||| |||||| ||||
seq2  TTCT-TAAGATGGCTGA-AGAATTAGCTGAT-AAGTCAAAAAA  1130