BAC Information

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BAC

Clone NameB6Ng01-041B19
Chromosome19 (Build37)
Map Location 39,777,577 - 39,797,850
singlet/doubletdoublet
Overlap gene9030012A22Rik
Upstream genePlce1, EG667587, Noc3l, Tbc1d12, Hells, LOC209753, Cyp2c55, LOC100042507, Cyp2c65, LOC668278, Cyp2c66, Cyp2c29, Cyp2c38, Cyp2c39, C730004C24Rik
Downstream geneCyp2c40, LOC100043108, LOC100042523, Cyp2c37, Cyp2c54, Cyp2c50, Cyp2c70, LOC545289, LOC676923, Pdlim1, LOC435599, Sorbs1, A930028N01Rik, Aldh18a1, LOC100043135, 4930521E07Rik, EG667723, Entpd1, EG667720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041B19.bB6Ng01-041B19.g
ACCDH867869DH867870
length4721,046
definitionDH867869|Mus musculus domesticus DNA, BAC clone: B6Ng01-041B19, 5' end.DH867870|Mus musculus domesticus DNA, BAC clone: B6Ng01-041B19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(39,777,577 - 39,778,054)(39,796,794 - 39,797,850)
sequence
aactcaaattgaaaaatatatatgagaatataaacaaccagtctttattc
aaatgatctgtggaagacaaagcaaatgtcatattgctgctaccatgtcc
ctgcctcattatagcttctttctcagttgtgagccagcataaaaaatgga
aagtaagtgtgatggagaggactggaatcacactgaaacagggaacatca
agagcacagaagtgtaacagggagaaacaagcttaccttggggatgaagt
agtttctgaacttagtatcacaggttacttcatgcaccacaccatttggg
ccaaggtcaatgtaccgctggacctcatgcaccatggcatttgtgtaagg
catgtggttcctgtcctgcatacaggggctgcggtgtctcccaatcacat
tgtcaatctcttcctggactttagctggatacaaggaatgacaaatattg
gaatgggaaaaatgtagcctgt
gaattcctgggaagtcttgagcctcggatttcttcagaggagcaggcaag
ctgagagtctgctcctgcagaaggttcaggcacgaaggggagtggaattc
ggaggaccaggggtatgaggagtgatgagtcccaagtccactatacctca
tcaagattaccatctgctgcagttgtttgggaccgtcccttattggctgc
cctgtgtgcagtagaactcctgggaggtcttcagaagtggcattttcaga
aaaacagacaagctggtaatctttagagattacccttaatctgccaactt
ccttctgtactatctttttctgatacaacaaacttcattttacaagcatg
gaaactacaatgcacttatatatcattcatatatctttgaattttttcta
ccttagagctctcctagctttttacctatgaatatctgtgcagacattac
ttgatggtatgtttttcttttctgtgtacccatctctaataatgaacttt
ctccttcacactgtaatttcatatttgctattgtgaaaaaattaaagttt
tcaaaaaatagtgtatattttaatagcaataagatcctttactttttatt
tctaaattcttataccatgtgtaaggcagttttcattacacataagtctg
cataagttggagatcaaagttatttatatctcgatagaagtgttacatcg
ctgtaatgaagctgacttgatcattgtgcatgattatattacagtgatct
tatatatagttttcaagtattctacacacaattatttttttaaatttttt
tttattacatattttcctcaattacatttccaatgctagcccaaaagtcc
cccacaccctctccccccactcccctaaccacccattcccattttttggc
cctggcgtcccctgtactggggcatataaattttgcatgacaatggcctc
tctttccagtgatggccgactaggcatctttgatcattgcagctagagtc
agagctctgggtctggttagttataatgtggttccaccgttagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_39777577_39778054
seq2: B6Ng01-041B19.b_44_521

seq1  GAATTCAACTCAAATTGAAAAATATATATGAGAATATAAACAACCAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCAAATTGAAAAATATATATGAGAATATAAACAACCAGTCT  50

seq1  TTATTCAAATGATCTGTGGAAGACAAAGCAAATGTCATATTGCTGCTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAAATGATCTGTGGAAGACAAAGCAAATGTCATATTGCTGCTACC  100

seq1  ATGTCCCTGCCTCATTATAGCTTCTTTCTCAGTTGTGAGCCAGCATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCTGCCTCATTATAGCTTCTTTCTCAGTTGTGAGCCAGCATAAAA  150

seq1  AATGGAAAGTAAGTGTGATGGAGAGGACTGGAATCACACTGAAACAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAGTAAGTGTGATGGAGAGGACTGGAATCACACTGAAACAGGGA  200

seq1  ACATCAAGAGCACAGAAGTGTAACAGGGAGAAACAAGCTTACCTTGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAGAGCACAGAAGTGTAACAGGGAGAAACAAGCTTACCTTGGGGA  250

seq1  TGAAGTAGTTTCTGAACTTAGTATCACAGGTTACTTCATGCACCACACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGTTTCTGAACTTAGTATCACAGGTTACTTCATGCACCACACCA  300

seq1  TTTGGGCCAAGGTCAATGTACCGCTGGACCTCATGCACCATGGCATTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCCAAGGTCAATGTACCGCTGGACCTCATGCACCATGGCATTTGT  350

seq1  GTAAGGCATGTGGTTCCTGTCCTGCATACAGGGGCTGCGGTGTCTCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCATGTGGTTCCTGTCCTGCATACAGGGGCTGCGGTGTCTCCCAA  400

seq1  TCACATTGTCAATCTCTTCCTGGACTTTAGCTGGATACAAGGAATGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTGTCAATCTCTTCCTGGACTTTAGCTGGATACAAGGAATGACAA  450

seq1  ATATTGGAATGGGAAAAATGTAGCCTGT  478
      ||||||||||||||||||||||||||||
seq2  ATATTGGAATGGGAAAAATGTAGCCTGT  478

seq1: chr19_39796794_39797850
seq2: B6Ng01-041B19.g_66_1111 (reverse)

seq1  ACCCTAACGGTGGAACAACATTATAAACTAACCAGTACCCCAGAGCTCTT  50
      |||||||||||||||| ||||||| ||||||||||   |||||||||| |
seq2  ACCCTAACGGTGGAACCACATTAT-AACTAACCAG--ACCCAGAGCTC-T  46

seq1  GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGA  100
      ||||||||||||| ||| ||| |||||| |||||||||||||||||||||
seq2  GACTCTAGCTGCA-ATG-ATC-AAAGAT-GCCTAGTCGGCCATCACTGGA  92

seq1  AAGAGAGGCCCATTGGTCAGGCAAAATTTATATGCCCCAGTACAGGGGAA  150
      |||||||| ||||| |||| |||||||||||||||||||||||||||| |
seq2  AAGAGAGG-CCATT-GTCATGCAAAATTTATATGCCCCAGTACAGGGG-A  139

seq1  CGCCAGGGCCAAAAAATGGGAATGGGTGGTTAGGGGAGTGGGGGGAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGGGCCAAAAAATGGGAATGGGTGGTTAGGGGAGTGGGGGGAGAGG  189

seq1  GTGTGGGGGACTTTTGGGCTAGCATTGGAAATGTAATTGAGGAAAATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGGGACTTTTGGGCTAGCATTGGAAATGTAATTGAGGAAAATATG  239

seq1  TAATAAGAAAAAATTTAAAAAAATAATTGTGTGTAGAATACTTGAAAACT  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAAAAATTTAAAAAAATAATTGTGTGTAGAATACTTGAAAACT  289

seq1  ATATATAAGATCACTGTAATATAATCATGCACAATGATCAAGTCAGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAGATCACTGTAATATAATCATGCACAATGATCAAGTCAGCTTC  339

seq1  ATTACAGCGATGTAACACTTCTATCGAGATATAAATAACTTTGATCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCGATGTAACACTTCTATCGAGATATAAATAACTTTGATCTCCA  389

seq1  ACTTATGCAGACTTATGTGTAATGAAAACTGCCTTACACATGGTATAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGCAGACTTATGTGTAATGAAAACTGCCTTACACATGGTATAAGA  439

seq1  ATTTAGAAATAAAAAGTAAAGGATCTTATTGCTATTAAAATATACACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAATAAAAAGTAAAGGATCTTATTGCTATTAAAATATACACTAT  489

seq1  TTTTTGAAAACTTTAATTTTTTCACAATAGCAAATATGAAATTACAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAAACTTTAATTTTTTCACAATAGCAAATATGAAATTACAGTGT  539

seq1  GAAGGAGAAAGTTCATTATTAGAGATGGGTACACAGAAAAGAAAAACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAAAGTTCATTATTAGAGATGGGTACACAGAAAAGAAAAACATA  589

seq1  CCATCAAGTAATGTCTGCACAGATATTCATAGGTAAAAAGCTAGGAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAGTAATGTCTGCACAGATATTCATAGGTAAAAAGCTAGGAGAGC  639

seq1  TCTAAGGTAGAAAAAATTCAAAGATATATGAATGATATATAAGTGCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGTAGAAAAAATTCAAAGATATATGAATGATATATAAGTGCATTG  689

seq1  TAGTTTCCATGCTTGTAAAATGAAGTTTGTTGTATCAGAAAAAGATAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCCATGCTTGTAAAATGAAGTTTGTTGTATCAGAAAAAGATAGTA  739

seq1  CAGAAGGAAGTTGGCAGATTAAGGGTAATCTCTAAAGATTACCAGCTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAAGTTGGCAGATTAAGGGTAATCTCTAAAGATTACCAGCTTGT  789

seq1  CTGTTTTTCTGAAAATGCCACTTCTGAAGACCTCCCAGGAGTTCTACTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTCTGAAAATGCCACTTCTGAAGACCTCCCAGGAGTTCTACTGC  839

seq1  ACACAGGGCAGCCAATAAGGGACGGTCCCAAACAACTGCAGCAGATGGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGCAGCCAATAAGGGACGGTCCCAAACAACTGCAGCAGATGGTA  889

seq1  ATCTTGATGAGGTATAGTGGACTTGGGACTCATCACTCCTCATACCCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGATGAGGTATAGTGGACTTGGGACTCATCACTCCTCATACCCCTG  939

seq1  GTCCTCCGAATTCCACTCCCCTTCGTGCCTGAACCTTCTGCAGGAGCAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCGAATTCCACTCCCCTTCGTGCCTGAACCTTCTGCAGGAGCAGA  989

seq1  CTCTCAGCTTGCCTGCTCCTCTGAAGAAATCCGAGGCTCAAGACTTCCCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCTTGCCTGCTCCTCTGAAGAAATCCGAGGCTCAAGACTTCCCA  1039

seq1  GGAATTC  1057
      |||||||
seq2  GGAATTC  1046