BAC Information

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BAC

Clone NameB6Ng01-042P23
Chromosome19 (Build37)
Map Location 52,636,351 - 52,637,471
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936, Ins1
Downstream geneLOC100043450, Xpnpep1, LOC668545, LOC674277, Add3, 1700001K23Rik, Mxi1, Smndc1, Dusp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042P23.bB6Ng01-042P23.g
ACCDH869194DH869195
length3821,109
definitionDH869194|Mus musculus domesticus DNA, BAC clone: B6Ng01-042P23, 5' end.DH869195|Mus musculus domesticus DNA, BAC clone: B6Ng01-042P23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttcactccttcttagaagggggaacaaaatactcaagggagtaaatacaa
agacaaagtgtagagcagaaactgaaggaaagcccactggactgagcaca
gggtccccaatggaagagttagaggaaggactgaaggagctgaaggggtt
tgcaacccataggaagaacaataatatcaaccaaacagacctccccagag
ctcccagggactaaaccaccaaccaaaaagtacacatggagagacccatg
actccagccgcatatgtagcaaaggatggctcatggtacatcaatgagaa
gagaggcccttattcctgtaatgtcttgatgctccagtgtaggggaatgc
caggatggggaggtaggattaggtgagtgggg
gaattccctcagcttactgctgctgtaacttccacccatgccacaacaaa
ctgggaccaggaattgggactaaataaacactttttttttcttaagttgc
tttttttcagaatgttttatcacagcaaaaggataagaaactaagacaag
aaactaagacaatacactgtctagaggtcatgccagtttggaatgctaaa
ttcctagtgttttgaagtctttgtatacatttgagaatctttctgctgta
attctattaaatatattttctatgcctttggactctattagatttgtagt
cttgaaatatcccatagttcttcattgttttggtcctgctcatatttttt
ctttacatgtgtctgaacgtattattgtttcaacttgtctcccatttttt
aaatgaattctacttaatttttgtttgttgatattgtatttcatttaact
gattgagtttattctcaacactattctttggttcattagtcccaatttcc
ttgttgaatttttttctgtattttttaattccttgtttaaatgctattat
atctatttgacgaactctcttgcctaggtcctggttgatttcgttaactc
tgtccatgtgtttatttgtgtcctttatgcgcctctttatctcttttaga
gtaggactctgcaatcttctttctgtgattcaagttattgcattatcatt
gatttctagtgttgaggagctttgaatttatacaagtgctacagtggctc
gctttacccaacgcttttgtctttattatgctttgcgttgtctttgaaga
tgcatgtgtcctctagtttccgttttgccttgtttccaactgttctaatt
tgtttcattttatatgagtctttctattgagttagattcacttagattcg
tgcttctgtatagaggggaagacactgtagtaacatttagtgatctgatc
ccaattgtacttgaggtagaacatacttgtgtattcactgctctgacagt
atgttcaaagagatgggtggaaactaggactttgttgtgaaatatagttt
gttttcattttgagtaaggtggttgaaatggacagagaattgaggacatg
ggagagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52636351_52637471
seq2: B6Ng01-042P23.g_65_1173 (reverse)

seq1  AGACTCTTCCATTACTCCTCAATTTCTCTGTCAATTATCAACACCCTTAA  50
      ||||||| ||||   ||||||| ||||||||| ||| |||||  |||| |
seq2  AGACTCTCCCAT--GTCCTCAA-TTCTCTGTCCATT-TCAACCACCTT-A  45

seq1  CTCAAAAATGAAAACAAAACTATATTTCACAACAAAGTTCCCTAGTGT-C  99
      ||| ||||||||||| ||||||||||||||||||||||  |||||| | |
seq2  CTC-AAAATGAAAAC-AAACTATATTTCACAACAAAGT--CCTAGTTTCC  91

seq1  ACACATACTCTGTGAACATTACTGTCAGAGCAAGTGAATACACAAGTATG  149
      || ||| |||| |||||| |||||||||||| ||||||||||||||||||
seq2  ACCCAT-CTCTTTGAACA-TACTGTCAGAGC-AGTGAATACACAAGTATG  138

seq1  TTCTACCTCAAGTACAATTGGGATCAGATCACTAAATGTTACTACAGTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCTACCTCAAGTACAATTGGGATCAGATCACTAAATGTTACTACAG-TG  187

seq1  TCTTCCCCTCTATACAGAAGCACGAATCTAAGTGAATCTAACTCAATAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCTCTATACAGAAGCACGAATCTAAGTGAATCTAACTCAATAGA  237

seq1  AAGACTCATATAAAATGAAACAAATTAGAACAGTTGGAAACAAGGCAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCATATAAAATGAAACAAATTAGAACAGTTGGAAACAAGGCAAAA  287

seq1  CGGAAACTAGAGGACACATGCATCTTCAAAGACAACGCAAAGCATAATAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAACTAGAGGACACATGCATCTTCAAAGACAACGCAAAGCATAATAA  337

seq1  AGACAAAAGCGTTGGGTAAAGCGAGCCACTGTAGCACTTGTATAAATTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAGCGTTGGGTAAAGCGAGCCACTGTAGCACTTGTATAAATTCA  387

seq1  AAGCTCCTCAACACTAGAAATCAATGATAATGCAATAACTTGAATCACAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCTCAACACTAGAAATCAATGATAATGCAATAACTTGAATCACAG  437

seq1  AAAGAAGATTGCAGAGTCCTACTCTAAAAGAGATAAAGAGGCGCATAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGATTGCAGAGTCCTACTCTAAAAGAGATAAAGAGGCGCATAAAG  487

seq1  GACACAAATAAACACATGGACAGAGTTAACGAAATCAACCAGGACCTAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAATAAACACATGGACAGAGTTAACGAAATCAACCAGGACCTAGG  537

seq1  CAAGAGAGTTCGTCAAATAGATATAATAGCATTTAAACAAGGAATTAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGTTCGTCAAATAGATATAATAGCATTTAAACAAGGAATTAAAA  587

seq1  AATACAGAAAAAAATTCAACAAGGAAATTGGGACTAATGAACCAAAGAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGAAAAAAATTCAACAAGGAAATTGGGACTAATGAACCAAAGAAT  637

seq1  AGTGTTGAGAATAAACTCAATCAGTTAAATGAAATACAATATCAACAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGAGAATAAACTCAATCAGTTAAATGAAATACAATATCAACAAAC  687

seq1  AAAAATTAAGTAGAATTCATTTAAAAAATGGGAGACAAGTTGAAACAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAGTAGAATTCATTTAAAAAATGGGAGACAAGTTGAAACAATA  737

seq1  ATACGTTCAGACACATGTAAAGAAAAAATATGAGCAGGACCAAAACAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTTCAGACACATGTAAAGAAAAAATATGAGCAGGACCAAAACAATG  787

seq1  AAGAACTATGGGATATTTCAAGACTACAAATCTAATAGAGTCCAAAGGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTATGGGATATTTCAAGACTACAAATCTAATAGAGTCCAAAGGCA  837

seq1  TAGAAAATATATTTAATAGAATTACAGCAGAAAGATTCTCAAATGTATAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATATATTTAATAGAATTACAGCAGAAAGATTCTCAAATGTATAC  887

seq1  AAAGACTTCAAAACACTAGGAATTTAGCATTCCAAACTGGCATGACCTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTCAAAACACTAGGAATTTAGCATTCCAAACTGGCATGACCTCT  937

seq1  AGACAGTGTATTGTCTTAGTTTCTTGTCTTAGTTTCTTATCCTTTTGCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGTATTGTCTTAGTTTCTTGTCTTAGTTTCTTATCCTTTTGCTG  987

seq1  TGATAAAACATTCTGAAAAAAAGCAACTTAAGAAAAAAAAAGTGTTTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAACATTCTGAAAAAAAGCAACTTAAGAAAAAAAAAGTGTTTATT  1037

seq1  TAGTCCCAATTCCTGGTCCCAGTTTGTTGTGGCATGGGTGGAAGTTACAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCAATTCCTGGTCCCAGTTTGTTGTGGCATGGGTGGAAGTTACAG  1087

seq1  CAGCAGTAAGCTGAGGGAATTC  1121
      ||||||||||||||||||||||
seq2  CAGCAGTAAGCTGAGGGAATTC  1109