BAC Information

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BAC

Clone NameB6Ng01-044G13
Chromosome19 (Build37)
Map Location 52,572,954 - 52,637,067
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936, Ins1
Downstream geneLOC100043450, Xpnpep1, LOC668545, LOC674277, Add3, 1700001K23Rik, Mxi1, Smndc1, Dusp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044G13.bB6Ng01-044G13.g
ACCDH870171DH870172
length1,159781
definitionDH870171|Mus musculus domesticus DNA, BAC clone: B6Ng01-044G13, 5' end.DH870172|Mus musculus domesticus DNA, BAC clone: B6Ng01-044G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,572,954 - 52,574,129)(52,636,287 - 52,637,067)
sequence
gaattctgtgctccttgcatactaggcaaacactttgccaactgaaatcc
atctgtagcttgatataatagcttctatacattgctcgtatataaggtat
tcatttcagacaccttctaaaacatttaaagtaaaataattctcttgggt
aaaagacttcctattcctacaggacataatattttctattctttgtccca
aatttttctgaaagagaaagagataccttggactaagattaaaaaaaaaa
aagtgaagaatcttggcttttttctagtcttgacttctgctatcatcact
gaacttgaggataacaaggaaccttggaatttatctgaacttatcttgat
ttaatgttcaagtttctttcaagttccccaagtgaccagaatgcttttaa
gtctctccatcagcagataaagcatatatcccacataaaactgtcccctt
ctgacctctcttgattggcagtaagtctaaatatgtttcaatttactaga
acctaaaacatctgggctcattgcttccttatatcagtgcaatgaagtat
atgacagttttgcccttgacaacagggattcctcaaaactaccttattgc
ctacattttctcattaaaacttgtcagggattctatgaggacaggtgtct
catctctcttgacaacttatctgattcaagctcacaactgataaatgact
agctgagatcccatggcattccactataggataagacaccttgtgttttc
agaaggttctcccaggagaaaaacatacagagcacacccttcatcaagat
gccttttcatccacagcactctgcctccataacctatcagcagatgatcc
tctctacgatgctcctgggctcaacagaaacaggcaaattactctattta
cattctaattttcaacactctgagacatagaatttcctatttactggtct
tctagtcacatgcatgatcctcgtctgcaggcatccctgggaaagtttct
ataaaatagctattatgcaggataatcctaaggtgcagagtggcaccatt
acttaggagtaccagccctttctatttgacctaaagcccttctaacagat
gaaatgatctttcaatgttaacactaccaagactatggagtctagatctt
gggaagaac
gaattctacttaatttttgtttgttgatattgtatttcatttaactgatt
gagtttattctcaacactattctttggttcattagtcccaatttccttgt
tgaatttttttctgtattttttaattccttgtttaaatgctattatatct
atttgacgaactctcttgcctaggtcctggttgatttcgttaactctgtc
catgtgtttatttgtgtcctttatgcgcctctttatctcttttagagtag
gactctgcaatcttctttctgtgattcaagttattgcattatcattgatt
tctagtgttgaggagctttgaatttatacaagtgctacagtggctcgctt
tacccaacgcttttgtctttattatgctttgcgttgtctttgaagatgca
tgtgtcctctagtttccgttttgccttgtttccaactgttctaatttgtt
tcattttatatgagtctttctattgagttagattcacttagattcgtgct
tctgtatagaggggaagacaactgtagtaacatttagtgatctgatccca
attgtacttgaggtagaacatacttgtgtattcacttgctctgacagtaa
tgttcacagagtatgtgtgacactagggaactttgttgtgaaatatagtt
ttgttttcatttttgagttaagggtgttgataattgacagagaaattgag
gagtaatggaagagtctatagctgttattaataatacagctaagttatta
tagagggatgtaggttgagagataggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52572954_52574129
seq2: B6Ng01-044G13.b_43_1201

seq1  GAATTCTGTGCTCCTTGCATACTAGGCAAACACTTTGCCAACTGAAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCTCCTTGCATACTAGGCAAACACTTTGCCAACTGAAATCC  50

seq1  ATCTGTAGCTTGATATAATAGCTTCTATACATTGCTCGTATATAAGGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAGCTTGATATAATAGCTTCTATACATTGCTCGTATATAAGGTAT  100

seq1  TCATTTCAGACACCTTCTAAAACATTTAAAGTAAAATAATTCTCTTGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCAGACACCTTCTAAAACATTTAAAGTAAAATAATTCTCTTGGGT  150

seq1  AAAAGACTTCCTATTCCTACAGGACATAATATTTTCTATTCTTTGTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACTTCCTATTCCTACAGGACATAATATTTTCTATTCTTTGTCCCA  200

seq1  AATTTTTCTGAAAGAGAAAGAGATACCTTGGACTAAGATTAAAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTGAAAGAGAAAGAGATACCTTGGACTAAGATTAAAAAAAAAA  250

seq1  AAGTGAAGAATCTTGGCTTTTTTCTAGTCTTGACTTCTGCTATCATCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGAATCTTGGCTTTTTTCTAGTCTTGACTTCTGCTATCATCACT  300

seq1  GAACTTGAGGATAACAAGGAACCTTGGAATTTATCTGAACTTATCTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGAGGATAACAAGGAACCTTGGAATTTATCTGAACTTATCTTGAT  350

seq1  TTAATGTTCAAGTTTCTTTCAAGTTCCCCAAGTGACCAGAATGCTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTTCAAGTTTCTTTCAAGTTCCCCAAGTGACCAGAATGCTTTTAA  400

seq1  GTCTCTCCATCAGCAGATAAAGCATATATCCCACATAAAACTGTCCCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCCATCAGCAGATAAAGCATATATCCCACATAAAACTGTCCCCTT  450

seq1  CTGACCTCTCTTGATTGGCAGTAAGTCTAAATATGTTTCAATTTACTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTCTCTTGATTGGCAGTAAGTCTAAATATGTTTCAATTTACTAGA  500

seq1  ACCTAAAACATCTGGGCTCATTGCTTCCTTATATCAGTGCAATGAAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAACATCTGGGCTCATTGCTTCCTTATATCAGTGCAATGAAGTAT  550

seq1  ATGACAGTTTTGCCCTTGACAACAGGGATTCCTCAAAACTACCTTATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGTTTTGCCCTTGACAACAGGGATTCCTCAAAACTACCTTATTGC  600

seq1  CTACATTTTCTCATTAAAACTTGTCAGGGATTCTATGAGGACAGGTGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTTCTCATTAAAACTTGTCAGGGATTCTATGAGGACAGGTGTCT  650

seq1  CATCTCTCTTGACAACTTATCTGATTCAAGCTCACAACTGATAAATGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTTGACAACTTATCTGATTCAAGCTCACAACTGATAAATGACT  700

seq1  AGCTGAGATCCCATGGCATTCCACTATAGGATAAGACACCTTGTGTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGATCCCATGGCATTCCACTATAGGATAAGACACCTTGTGTTTTC  750

seq1  AGAAGGTTCTCCCAGGAGAAAAACATACAGAGCACACCCTTCATCAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTTCTCCCAGGAGAAAAACATACAGAGCACACCCTTCATCAAGAT  800

seq1  GCCTTTTCATCCACAGCACTCTGCCTCCAT-ACCTATCAGCAGATGATCC  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCCTTTTCATCCACAGCACTCTGCCTCCATAACCTATCAGCAGATGATCC  850

seq1  TCTCCACGATGCTCCTGGGCTCAACAGAAACAGGCAAATCTACTCTAATA  899
      |||| |||||||||||||||||||||||||||||||||| |||||| || 
seq2  TCTCTACGATGCTCCTGGGCTCAACAGAAACAGGCAAAT-TACTCT-ATT  898

seq1  TACATTCTAATTTCCAACACTCTGAGAACATAGAATTTCCTAATTTACTG  949
      ||||||||||||| |||||||||||| |||||||||||||| ||||||||
seq2  TACATTCTAATTTTCAACACTCTGAG-ACATAGAATTTCCT-ATTTACTG  946

seq1  GTCTTCTAGTCACCATGCATGATCCTCGTCTGCAGGCATCCCT-GGAAAG  998
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  GTCTTCTAGTCA-CATGCATGATCCTCGTCTGCAGGCATCCCTGGGAAAG  995

seq1  TTTCTTATAAAATAGCTATTATGGCATGATAATCCTAAGGTGCAGTAGTG  1048
      |||| ||||||||||||||||| ||| |||||||||||||||||| ||||
seq2  TTTC-TATAAAATAGCTATTAT-GCAGGATAATCCTAAGGTGCAG-AGTG  1042

seq1  GCACACATACCTAGGAGTAACCAGCCTCTCTCTATTTGAACCTAAAGCCC  1098
      ||||   ||| ||||||| ||||||| || |||||||| |||||||||||
seq2  GCACCATTACTTAGGAGT-ACCAGCC-CTTTCTATTTG-ACCTAAAGCCC  1089

seq1  TCTCAACAAGATGAAAATGATCTTCAAATGCTAAACAACTACCAAGACCT  1148
      | || |  ||||| ||||||||||  |||| |||   |||||||||| ||
seq2  T-TCTAACAGATG-AAATGATCTTTCAATGTTAA--CACTACCAAGA-CT  1134

seq1  AGTGAAGTCACAGATCTTGGAGAAGAAC  1176
      | || ||||  ||||||||| |||||||
seq2  A-TGGAGTC-TAGATCTTGG-GAAGAAC  1159

seq1: chr19_52636287_52637067
seq2: B6Ng01-044G13.g_67_847 (reverse)

seq1  TCCTTCCTATCTCTCAACCTACATCCCTCTATAATAACTTAGCTGTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTATCTCTCAACCTACATCCCTCTATAATAACTTAGCTGTATTA  50

seq1  TTAATAACAGCTATAGACTCTTCCATTACTCCTCAATTTCTCTGTCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACAGCTATAGACTCTTCCATTACTCCTCAATTTCTCTGTCAATT  100

seq1  ATCAACACCCTTAACTCAAAAATGAAAACAAAACTATATTTCACAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACACCCTTAACTCAAAAATGAAAACAAAACTATATTTCACAACAAA  150

seq1  GTTCCCTAGTGTCACACATACTCTGTGAACATTACTGTCAGAGCAAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTAGTGTCACACATACTCTGTGAACATTACTGTCAGAGCAAGTGA  200

seq1  ATACACAAGTATGTTCTACCTCAAGTACAATTGGGATCAGATCACTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAAGTATGTTCTACCTCAAGTACAATTGGGATCAGATCACTAAAT  250

seq1  GTTACTACAGTTGTCTTCCCCTCTATACAGAAGCACGAATCTAAGTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTACAGTTGTCTTCCCCTCTATACAGAAGCACGAATCTAAGTGAAT  300

seq1  CTAACTCAATAGAAAGACTCATATAAAATGAAACAAATTAGAACAGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCAATAGAAAGACTCATATAAAATGAAACAAATTAGAACAGTTGG  350

seq1  AAACAAGGCAAAACGGAAACTAGAGGACACATGCATCTTCAAAGACAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGCAAAACGGAAACTAGAGGACACATGCATCTTCAAAGACAACG  400

seq1  CAAAGCATAATAAAGACAAAAGCGTTGGGTAAAGCGAGCCACTGTAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATAATAAAGACAAAAGCGTTGGGTAAAGCGAGCCACTGTAGCAC  450

seq1  TTGTATAAATTCAAAGCTCCTCAACACTAGAAATCAATGATAATGCAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAATTCAAAGCTCCTCAACACTAGAAATCAATGATAATGCAATA  500

seq1  ACTTGAATCACAGAAAGAAGATTGCAGAGTCCTACTCTAAAAGAGATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAATCACAGAAAGAAGATTGCAGAGTCCTACTCTAAAAGAGATAAA  550

seq1  GAGGCGCATAAAGGACACAAATAAACACATGGACAGAGTTAACGAAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCGCATAAAGGACACAAATAAACACATGGACAGAGTTAACGAAATCA  600

seq1  ACCAGGACCTAGGCAAGAGAGTTCGTCAAATAGATATAATAGCATTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGACCTAGGCAAGAGAGTTCGTCAAATAGATATAATAGCATTTAAA  650

seq1  CAAGGAATTAAAAAATACAGAAAAAAATTCAACAAGGAAATTGGGACTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAATTAAAAAATACAGAAAAAAATTCAACAAGGAAATTGGGACTAA  700

seq1  TGAACCAAAGAATAGTGTTGAGAATAAACTCAATCAGTTAAATGAAATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAAAGAATAGTGTTGAGAATAAACTCAATCAGTTAAATGAAATAC  750

seq1  AATATCAACAAACAAAAATTAAGTAGAATTC  781
      |||||||||||||||||||||||||||||||
seq2  AATATCAACAAACAAAAATTAAGTAGAATTC  781