BAC Information

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BAC

Clone NameB6Ng01-045M09
Chromosome19 (Build37)
Map Location 34,112,495 - 34,112,912
singlet/doubletsinglet
Overlap geneLipk
Upstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127, Lipf
Downstream geneEG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12, LOC676714, Pank1, Mphosph1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045M09.bB6Ng01-045M09.g
ACCDH871135DH871136
length1,085412
definitionDH871135|Mus musculus domesticus DNA, BAC clone: B6Ng01-045M09, 5' end.DH871136|Mus musculus domesticus DNA, BAC clone: B6Ng01-045M09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccacagtttccattgttatgtctcccttttcctttctgatttta
ctaatttggataatgtctccgtgccctctggttagtctgattaagggttt
atctatcttgttgattttctcaaagaaccagctccttgctttgttgattc
tttgtatagctctttttgtttctatttagttgacttaatccctgagtttg
attatttcctgctatctactcctcttgggtgtattggcttctttttgttc
tagagcagtcaggcatgctatcaagctgcttagtgtaagctctctccagt
ttctttttggaggctcttagaggtatgagttttcttcttactactgcttt
tatagtgtaccataagttttgctatgatgtatcttcattttcattaaatc
taaaattctttaagttctttctttattttttgcttgaccaagtcatcatt
gagtagagcattgttcagtttccatgtgtatgtgtgttttctgctgtttt
tgttcgaatttaagatcacccttagtctgtggtgatctgatagagtgcat
gggataatttcaatcttcttctatctgttgaggcctgttttattgccaaa
tatatagttaatttggagaaggtcccatgaggtgttgagtagaaagtata
tctattgctttaggatgaaatgttctataaatatctgttacgtccatttg
tttcataactttgtgagtttcactgtgtctctgtttagtttccgtttcca
tgatctgtccattgctgagagtggagtgttaaagtctcctactaatattg
tgtgcggtgcgatatatgctttgagctttggtgtagtttctttgatgaat
gtgggtgcccttacatttgaagcatagaggttaagaattgagagagtctt
ctttgtagaattttctttgaccagtatgaagtgtcttatccttttgatat
cttttggttggagtcaatgtattgatataagaatgtactacgctggtttc
tgggattattgttggaaatataatcaatcgttcactgaggttggtgctgc
tgtgccgagaggggttcgttgcgctaatcaacggt
ccacgcattgcccatgtatatcagtcaaatcttgctttcatttcatcaga
gtgaatttcatattattagggtaacaagttatagggaaggtgaaagatca
gttttatttcttaaaagttttagaaacaactagttactataaaaactgtg
acagatttcttctgaaatcctttattaactgatgattaccacagcaactg
aacaagaataatgcatatttacttttattgcagtaatgcactataaaatt
ttatcctttctttggtaagagccagtaaatttctatgtgatataacttaa
ttcagttgtgagtttgaaaatgttttgttttatagaaattcctatttttt
aaaaaatatttactagtctatgagcatatatgtatatatatatgtgtgtg
tgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_34112495_34112912
seq2: B6Ng01-045M09.g_69_486 (reverse)

seq1  CACACACACACACACACACATATATATATACATATATGCTCATAGACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACATATATATATACATATATGCTCATAGACTAG  50

seq1  TAAATATTTTTTAAAAAATAGGAATTTCTATAAAACAAAACATTTTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTTTAAAAAATAGGAATTTCTATAAAACAAAACATTTTCAAA  100

seq1  CTCACAACTGAATTAAGTTATATCACATAGAAATTTACTGGCTCTTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAACTGAATTAAGTTATATCACATAGAAATTTACTGGCTCTTACCA  150

seq1  AAGAAAGGATAAAATTTTATAGTGCATTACTGCAATAAAAGTAAATATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGATAAAATTTTATAGTGCATTACTGCAATAAAAGTAAATATGC  200

seq1  ATTATTCTTGTTCAGTTGCTGTGGTAATCATCAGTTAATAAAGGATTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTTGTTCAGTTGCTGTGGTAATCATCAGTTAATAAAGGATTTCA  250

seq1  GAAGAAATCTGTCACAGTTTTTATAGTAACTAGTTGTTTCTAAAACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATCTGTCACAGTTTTTATAGTAACTAGTTGTTTCTAAAACTTTT  300

seq1  AAGAAATAAAACTGATCTTTCACCTTCCCTATAACTTGTTACCCTAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAAAACTGATCTTTCACCTTCCCTATAACTTGTTACCCTAATAA  350

seq1  TATGAAATTCACTCTGATGAAATGAAAGCAAGATTTGACTGATATACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTCACTCTGATGAAATGAAAGCAAGATTTGACTGATATACATG  400

seq1  GGCAATGCGTGGGAATTC  418
      ||||||||||||||||||
seq2  GGCAATGCGTGGGAATTC  418