BAC Information

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BAC

Clone NameB6Ng01-047O10
Chromosome7 (Build37)19 (Build37)
Map Location 62,483,119 - 62,483,15712,346,520 - 12,347,662
singlet/doubletsingletsinglet
Overlap geneLuzp2
Upstream geneMrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047O10.bB6Ng01-047O10.g
ACCDH872631DH872632
length8571,136
definitionDH872631|Mus musculus domesticus DNA, BAC clone: B6Ng01-047O10, 5' end.DH872632|Mus musculus domesticus DNA, BAC clone: B6Ng01-047O10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(62,483,119 - 62,483,157)(12,346,520 - 12,347,662)
sequence
gaattctgcactaaaaccatctggccctgagctttttttggttggaaggt
ttttgatgactatttccttaagggttataggactgtttagataggttacc
tgagtcttatttctctttcattattacatttaaaaaatcattttattcat
ttacatttcaagtgatatcccccttcctggttacccctccataacccttc
ccatctatccctctctccccctcccctctgttcctctatccattcaccca
tccccacctcaccactctagaatccctctatgttggggcatcaagcctcc
acagagccaagggcctcacctcccattgatgtcagataaggccatcttct
gctacatttgtatctggagccatggattcctctttggttggtggtttagt
ccctgggagctctgggtggcccaattagttgatttagttcttcctatgcg
gttgcaatccccttcagctccttcattcctccccatagctcttccattga
ggtccctgggctcagtctagtggttggctctgagtgtctgcatctgtctt
ggtctggtgctcatagaacctgtcagggaagagccatacctggctcctgt
cagcaagggcttcttagtatcactaacaatgtgggggtttggtgtctgca
gataggatggatccctaggtggggtgaggttacctaatcttgatttaact
ttgttacatggtatatgtctagaaaatcaaccctttaatctagattttcc
agttttgtagagtataggcttttgcagtaggttctgatatatatatatat
ataattatataatatataatatatatattattatatatataatatatatt
aatatca
gaattctttgagaaaaatcaagttgggaaagttgtggaagcctgaacctg
ttaaatcaccagcctaagcctctgcagcagatttctgattgattctcatc
cccaagacttctaacattgggtcatcagtattttgatgtagtgtaataca
gttggggccatcaccattgattattctgtgatcctgagcaggtgagaatg
atcacaaggaaacttcctgtttgaaagaaacaaagagctagattcttttt
gttttttcgaaaggtaacttttttctttaatattttttattacgtatttt
cctcaattacatttccaatgctatcccaaaagtcccccacaccctccccc
cgcccccacttccctacccacccattcccattttttggccctggcgttcc
cctgtactgggtcatataaagtttgcctgtacaatgggcctctttccagt
gatggcgactaggccatcttttgatacatatgcagctagagtcaagagct
ccggggtactgattagttcataatgttgcacctacagggttgcagatctc
tttagctccttggatactttctctagctcctccattgggggccctgtgat
ccatccaatcctgagtgaggtatcacaatcacaaaagaactcaaatggta
tgtactcactgataagtggatattaggccagaaatttagtatagcgagat
ataagatacaatttgcaaaacacatgaaactcaagaagaacgaagaccaa
agtgtggacactttgccccttcttagaaatggaaataatcacccatggaa
ggagttacagagacaaagttttggagctgagacaaaaggatggaccatct
agagactgccatatccagggatccatcccataattagcctcaaatgatga
caccattgcatacactagcaagcgtttgctgcaaggaccctgatattggc
ctagcaaacaagagctagaattcttaagatcatgtcttcaagtcaggatt
ctcgatcaagacaatggcccggaacggatgagcaagagggtcatcaaaga
ttaactgaacgagattgtggatagcttcaatgacattgaatcatgaagaa
gtccctctcctagtatttatgcctatggtttagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62483119_62483157
seq2: B6Ng01-047O10.b_482_520 (reverse)

seq1  TGAAGGAGCTGAAGGGGTTTGCAACCCCATAGAAAGAAC  39
      ||||||||||||||||| |||||||| ||||| ||||||
seq2  TGAAGGAGCTGAAGGGGATTGCAACCGCATAGGAAGAAC  39

seq1: chr19_12346520_12347662
seq2: B6Ng01-047O10.g_67_1202

seq1  GAATTCTTTGAGAAAAATCAAGTTGGGAAAGTTGTGGAAGCCTGAACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAGAAAAATCAAGTTGGGAAAGTTGTGGAAGCCTGAACCTG  50

seq1  TTAAATCACCAGCCTAAGCCTCTGCAGCAGATTTCTGATTGATTCTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCACCAGCCTAAGCCTCTGCAGCAGATTTCTGATTGATTCTCATC  100

seq1  CCCAAGACTTCTAACATTGGGTCATCAGTATTTTGATGTAGTGTAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGACTTCTAACATTGGGTCATCAGTATTTTGATGTAGTGTAATACA  150

seq1  GTTGGGGCCATCACCATTGATTATTCTGTGATCCTGAGCAGGTGAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGCCATCACCATTGATTATTCTGTGATCCTGAGCAGGTGAGAATG  200

seq1  ATCACAAGGAAACTTCCTGTTTGAAAGAAACAAAGAGCTAGATTCTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAGGAAACTTCCTGTTTGAAAGAAACAAAGAGCTAGATTCTTTTT  250

seq1  GTTTTTTCGAAAGGTAACTTTTTTCTTTAATATTTTTTATTACGTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCGAAAGGTAACTTTTTTCTTTAATATTTTTTATTACGTATTTT  300

seq1  CCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCACACCCTCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCACACCCTCCCCC  350

seq1  CGCCCCCACTTCCCTACCCACCCATTCCCATTTTTTGGCCCTGGCGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCCACTTCCCTACCCACCCATTCCCATTTTTTGGCCCTGGCGTTCC  400

seq1  CCTGTACTGGGTCATATAAAGTTTGCCTGTACAATGGGCCTCTTTCCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTGGGTCATATAAAGTTTGCCTGTACAATGGGCCTCTTTCCAGT  450

seq1  GATGGCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCT  500

seq1  CCGGGGTACTGATTAGTTCATAATGTTGCACCTACAGGGTTGCAGATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGTACTGATTAGTTCATAATGTTGCACCTACAGGGTTGCAGATCTC  550

seq1  TTTAGCTCCTTGGATACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCCTTGGATACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGAT  600

seq1  CCATCCAATCCTGAGTGAGGTATCACAATCACAAAAGAACTCAAATGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAATCCTGAGTGAGGTATCACAATCACAAAAGAACTCAAATGGTA  650

seq1  TGTACTCACTGATAAGTGGATATTAGGCCAGAAATTTAGTATAGCGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCACTGATAAGTGGATATTAGGCCAGAAATTTAGTATAGCGAGAT  700

seq1  ATAAGATACAATTTGCAAAACACATGAAACTCAAGAAGAACGAAGACCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATACAATTTGCAAAACACATGAAACTCAAGAAGAACGAAGACCAA  750

seq1  AGTGTGGACACTTTGCCCCTTCTTAGAAATGGAAACAATCACCCATGGAA  800
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTGTGGACACTTTGCCCCTTCTTAGAAATGGAAATAATCACCCATGGAA  800

seq1  GGAGTTACAGAGACAAAG-TTTGGAGCTGAGACAAAAGGATGGACCATCT  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGAGTTACAGAGACAAAGTTTTGGAGCTGAGACAAAAGGATGGACCATCT  850

seq1  AGAGACTGCCATATCCAGGGATCCATCCCATAATTAGCCTCCAAATGATG  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGAGACTGCCATATCCAGGGATCCATCCCATAATTAGCCT-CAAATGATG  899

seq1  ACACCATTGCATACACTAGCAAGCGTTTGCTGCAAGGACCCTGATATTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTGCATACACTAGCAAGCGTTTGCTGCAAGGACCCTGATATTGG  949

seq1  CCTAGCAAACAAAGAGCTAG-ATTCTAAGGATCATGTCTTCGAGTCAGGA  998
      |||||||||| ||||||||| ||||| | |||||||||||| ||||||||
seq2  CCTAGCAAAC-AAGAGCTAGAATTCTTAAGATCATGTCTTCAAGTCAGGA  998

seq1  TTCTCGATCCAGAGACAATGGCCCGGACGGGATGGAGCAGGAAGGCGTCA  1048
      |||||||||   |||||||||||||||  |||| ||||| ||  | ||||
seq2  TTCTCGATC--AAGACAATGGCCCGGAACGGAT-GAGCAAGA--GGGTCA  1043

seq1  TC-AAGAGTTACTGGAACGAGATTGTGGATAGCTTCAATGACA-TGAATC  1096
      || |||| | ||| ||||||||||||||||||||||||||||| ||||||
seq2  TCAAAGATTAACT-GAACGAGATTGTGGATAGCTTCAATGACATTGAATC  1092

seq1  GATGAGAGAGTCCCTCCTCCATGGTATTTATGCCTATGGTTTTGAGA  1143
       ||||   ||||||| |||| | ||||||||||||||||||| ||||
seq2  -ATGAAGAAGTCCCT-CTCC-TAGTATTTATGCCTATGGTTTAGAGA  1136