BAC Information

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BAC

Clone NameB6Ng01-052H24
Chromosome19 (Build37)
Map Location 14,276,817 - 14,481,464
singlet/doubletdoublet
Overlap geneEG667433
Upstream geneOlfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneTle4, EG433225, EG635497, Pomc-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052H24.bB6Ng01-052H24.g
ACCDH875839DH875840
length1,1611,054
definitionDH875839|Mus musculus domesticus DNA, BAC clone: B6Ng01-052H24, 5' end.DH875840|Mus musculus domesticus DNA, BAC clone: B6Ng01-052H24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,480,292 - 14,481,464)(14,276,817 - 14,277,867)
sequence
gaattcagtcaaagctgagttcaatatggttgggttctaatctcgcattt
cttagcagaggcacatttttcttttggatctgaaagcactgctggctgct
atctgcggtaagaaataccgtcctgaggcagatgtctatttcctctgcca
ggctggtgtggaagccgaccctgtttcctcttccatctggatgctgggga
agcagtaaggaggtgtcaagcattctgccccaaacattctttctcatccg
cgtgctctcgtgctagctaacatcttttaaaatagcagcaaatggctccg
aaagagataacttaagcctgtgaagccaggacaacagcgagggaagcgga
atctctgaatttgtgatccatgcccattctgacatctaggcaagctttga
actacaagtcctggcttcgaatctcagctcttaagcagcttgccgtggac
agtattggagggtgtaatctctgaattgcattgcagattcattaatatga
atgtgaaacacccacagtctgaaggagagggagagatgtttctgcccagt
ttctattgggaaggagtcacctagttttggctgttcctgcattttggggc
tctgtcatttcaggtgatgaagaagagaggagaagggctataggaacggg
gtgagcaggtgtttcacccactctcctgatccttgatcctcaggccatgg
ttggagaagggaaggagcatcgctgttttatgctgcggcggctgctgctt
gatgatcacagcagaactcacaaacatttcttgtacagacagacccaaac
agtaaatagtttggctattttgggttgcggttcgttgttacaacccctga
gctctgttgctgctgagtgaaagtggttgcagatgtgattttattcaaat
taaattttatatttaaaaagaagtcatactggtgagacttggttaaaggg
acaccagctttctggtcctcagccatagatttaccttttcgtaattagat
taagctaacaattaatttctgaaaagctgatgatcatttggaaaataaaa
ttagggatttttctggaaccatgtaaggaatgtgtaaaccttaaaaccag
gagaagggatatatccttgttgattgagtgttggcccttccatcgcccct
cactagagccc
gaattcagtgaaatggtgtctttgtaatgaggtaatgcctacctgagggc
aagccaaagactaggagaaaatatttgcagaagacataactaataagaat
cttttatccaaaatgtacaagctctcaaaacacaaggacgatgaaatgaa
taataccattttaaaagtgaatgaaagcaatggccactgtattgtgggtg
atcatgggtggcaaaaagcagatgatatacttacagatatggcatgttct
ctgccagcagcatatcatgtgccccaggaagctacagaatgtagccctac
atattcataggaagcaatttcatgaccctctaatgctataattgttttac
tttttatgataatgcagcttaaaatataagtatattgtagagctgtatga
aaatattttcatgctatataagctttttactattttaaattttaacttgt
gaaaagctaaggcataaagacatacattagcttgtttcttgacaagatca
gaatcatggatatcactgttttctacacctcatcctaccataaggccttc
tggaaccgtcacattgaaagagatgccttggtggggaagacatcccccac
tgaaggacccctgaagtgtttcagttagcttttactatatagaagatacc
ctctaaaaatatatttaagagtagagccagagtacatttataaaccagga
gttgtttataatcagtatcagagagtatatgtgatacagaattacaaaca
aatatttctctatagctaccattgtaaatgtattcaccagcatcatacag
gcacagaatagtgtgtgccctgatgtcactatggctatgacttaacttaa
gagaaactctttacaccttattatctaaggacaccaaattccataatgaa
tgaaagtttatagaaacattcttaaatatactgagtatataagtagcaag
tctgttctgtgttccctttctcattggtgaacctgattttccaaggtcat
ctggttgggtgtgggattttgtgttgtctgtctgtctgtctgactgccta
tctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14480292_14481464
seq2: B6Ng01-052H24.b_38_1198 (reverse)

seq1  GGGCTCTAGTGATGGCAGAATGGAAAGGCACAAACAACAAAACAACAAAA  50
      |||||||||||| ||  | |||||| ||  | ||||   || |||| || 
seq2  GGGCTCTAGTGAGGGGCG-ATGGAAGGG--CCAACACTCAATCAAC-AAG  46

seq1  GATATATCCCTCTCTCCTGGTCTTAAAGTTTTTCACATTTCCTTTACATG  100
      ||||||||||| ||||||||| || ||| ||| ||||||  | |||||||
seq2  GATATATCCCT-TCTCCTGGT-TTTAAGGTTTACACATT--CCTTACATG  92

seq1  GTTTTCCAGAAATATCCTAATTTTTATTTTCCCAAATGATCATCAGCTAT  150
      |  ||||||||| ||||  | ||||||||| ||||||||||||||||| |
seq2  G--TTCCAGAAAAATCCCTAATTTTATTTT-CCAAATGATCATCAGCTTT  139

seq1  TCAGAAATATATTTGTAGCTTAATCTAAATAACGAAAAGGTAAATCTATT  200
      ||||||||  |||  ||||||||||| ||| ||||||||||||||||| |
seq2  TCAGAAATTAATTGTTAGCTTAATCT-AATTACGAAAAGGTAAATCTA-T  187

seq1  GGCTGAGGACCAGAAAGCT-GTGTCCCTTTTACCAAGTCTCACCAGTATG  249
      ||||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  GGCTGAGGACCAGAAAGCTGGTGTCCCTTTAACCAAGTCTCACCAGTATG  237

seq1  ACTTCTTTTTAAATATAAAATTTAATTTGAATAAAATCACATCTGCAACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTTTTAAATATAAAATTTAATTTGAATAAAATCACATCTGCAACC  287

seq1  ACTTTCACTCAGCAGCAACAGAGCTCAGGGGTTGTAACAACGAACCGCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCACTCAGCAGCAACAGAGCTCAGGGGTTGTAACAACGAACCGCAA  337

seq1  CCCAAAATAGCCAAACTATTTACTGTTTGGGTCTGTCTGTACAAGAAATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAATAGCCAAACTATTTACTGTTTGGGTCTGTCTGTACAAGAAATG  387

seq1  TTTGTGAGTTCTGCTGTGATCATCAAGCAGCAGCCGCCGCAGCATAAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAGTTCTGCTGTGATCATCAAGCAGCAGCCGCCGCAGCATAAAAC  437

seq1  AGCGATGCTCCTTCCCTTCTCCAACCATGGCCTGAGGATCAAGGATCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATGCTCCTTCCCTTCTCCAACCATGGCCTGAGGATCAAGGATCAGG  487

seq1  AGAGTGGGTGAAACACCTGCTCACCCCGTTCCTATAGCCCTTCTCCTCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGTGAAACACCTGCTCACCCCGTTCCTATAGCCCTTCTCCTCTC  537

seq1  TTCTTCATCACCTGAAATGACAGAGCCCCAAAATGCAGGAACAGCCAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATCACCTGAAATGACAGAGCCCCAAAATGCAGGAACAGCCAAAA  587

seq1  CTAGGTGACTCCTTCCCAATAGAAACTGGGCAGAAACATCTCTCCCTCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGACTCCTTCCCAATAGAAACTGGGCAGAAACATCTCTCCCTCTC  637

seq1  CTTCAGACTGTGGGTGTTTCACATTCATATTAATGAATCTGCAATGCAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGACTGTGGGTGTTTCACATTCATATTAATGAATCTGCAATGCAAT  687

seq1  TCAGAGATTACACCCTCCAATACTGTCCACGGCAAGCTGCTTAAGAGCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATTACACCCTCCAATACTGTCCACGGCAAGCTGCTTAAGAGCTG  737

seq1  AGATTCGAAGCCAGGACTTGTAGTTCAAAGCTTGCCTAGATGTCAGAATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCGAAGCCAGGACTTGTAGTTCAAAGCTTGCCTAGATGTCAGAATG  787

seq1  GGCATGGATCACAAATTCAGAGATTCCGCTTCCCTCGCTGTTGTCCTGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGATCACAAATTCAGAGATTCCGCTTCCCTCGCTGTTGTCCTGGC  837

seq1  TTCACAGGCTTAAGTTATCTCTTTCGGAGCCATTTGCTGCTATTTTAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGCTTAAGTTATCTCTTTCGGAGCCATTTGCTGCTATTTTAAAA  887

seq1  GATGTTAGCTAGCACGAGAGCACGCGGATGAGAAAGAATGTTTGGGGCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAGCTAGCACGAGAGCACGCGGATGAGAAAGAATGTTTGGGGCAG  937

seq1  AATGCTTGACACCTCCTTACTGCTTCCCCAGCATCCAGATGGAAGAGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTGACACCTCCTTACTGCTTCCCCAGCATCCAGATGGAAGAGGAA  987

seq1  ACAGGGTCGGCTTCCACACCAGCCTGGCAGAGGAAATAGACATCTGCCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTCGGCTTCCACACCAGCCTGGCAGAGGAAATAGACATCTGCCTC  1037

seq1  AGGACGGTATTTCTTACCGCAGATAGCAGCCAGCAGTGCTTTCAGATCCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGGTATTTCTTACCGCAGATAGCAGCCAGCAGTGCTTTCAGATCCA  1087

seq1  AAAGAAAAATGTGCCTCTGCTAAGAAATGCGAGATTAGAACCCAACCATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAATGTGCCTCTGCTAAGAAATGCGAGATTAGAACCCAACCATA  1137

seq1  TTGAACTCAGCTTTGACTGAATTC  1173
      ||||||||||||||||||||||||
seq2  TTGAACTCAGCTTTGACTGAATTC  1161

seq1: chr19_14276817_14277867
seq2: B6Ng01-052H24.g_67_1120

seq1  GAATTCAGTGAAATGGTGTCTTTGTAATGAGGTAATGCCTACCTGAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAAATGGTGTCTTTGTAATGAGGTAATGCCTACCTGAGGGC  50

seq1  AAGCCAAAGACTAGGAGAAAATATTTGCAGAAGACATAACTAATAAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAAGACTAGGAGAAAATATTTGCAGAAGACATAACTAATAAGAAT  100

seq1  CTTTTATCCAAAATGTACAAGCTCTCAAAACACAAGGACGATGAAATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATCCAAAATGTACAAGCTCTCAAAACACAAGGACGATGAAATGAA  150

seq1  TAATACCATTTTAAAAGTGAATGAAAGCAATGGCCACTGTATTGTGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACCATTTTAAAAGTGAATGAAAGCAATGGCCACTGTATTGTGGGTG  200

seq1  ATCATGGGTGGCAAAAAGCAGATGATATACTTACAGATATGGCATGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGGTGGCAAAAAGCAGATGATATACTTACAGATATGGCATGTTCT  250

seq1  CTGCCAGCAGCATATCATGTGCCCCAGGAAGCTACAGAATGTAGCCCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGCAGCATATCATGTGCCCCAGGAAGCTACAGAATGTAGCCCTAC  300

seq1  ATATTCATAGGAAGCAATTTCATGACCCTCTAATGCTATAATTGTTTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATAGGAAGCAATTTCATGACCCTCTAATGCTATAATTGTTTTAC  350

seq1  TTTTTATGATAATGCAGCTTAAAATATAAGTATATTGTAGAGCTGTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGATAATGCAGCTTAAAATATAAGTATATTGTAGAGCTGTATGA  400

seq1  AAATATTTTCATGCTATATAAGCTTTTTACTATTTTAAATTTTAACTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTCATGCTATATAAGCTTTTTACTATTTTAAATTTTAACTTGT  450

seq1  GAAAAGCTAAGGCATAAAGACATACATTAGCTTGTTTCTTGACAAGATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTAAGGCATAAAGACATACATTAGCTTGTTTCTTGACAAGATCA  500

seq1  GAATCATGGATATCACTGTTTTCTACACCTCATCCTACCATAAGGCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATGGATATCACTGTTTTCTACACCTCATCCTACCATAAGGCCTTC  550

seq1  TGGAACCGTCACATTGAAAGAGATGCCTTGGTGGGGAAGACATCCCCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCGTCACATTGAAAGAGATGCCTTGGTGGGGAAGACATCCCCCAC  600

seq1  TGAAGGACCCCTGAAGTGTTTCAGTTAGC-TTTACTATATAGAAGATACC  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGAAGGACCCCTGAAGTGTTTCAGTTAGCTTTTACTATATAGAAGATACC  650

seq1  CTCTAAAAATATATTTAAGAGTAGAGCCAGAGTACATTTATAAACCAGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAAATATATTTAAGAGTAGAGCCAGAGTACATTTATAAACCAGGA  700

seq1  GTTGTTTATAATCAGTATCAGAGAGTATATGTGATACAGAATTACAAACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTATAATCAGTATCAGAGAGTATATGTGATACAGAATTACAAACA  750

seq1  AATATTTCTCTATAGCTACCATTGTAAATGTATTCACCAGCATCATACAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCTCTATAGCTACCATTGTAAATGTATTCACCAGCATCATACAG  800

seq1  GCACAGAATAGTGTGTGCCCTGATGTCACTATGGCTATGACTTAACTTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAATAGTGTGTGCCCTGATGTCACTATGGCTATGACTTAACTTAA  850

seq1  GAGAAACTCTTTACACCTTATAATCTAAGGACACCAAATTCCATAATGAA  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGAAACTCTTTACACCTTATTATCTAAGGACACCAAATTCCATAATGAA  900

seq1  TGAAAGTTTATAGAAACATTCTTATATAATACTTGAGTATATAAGTAGCA  949
      |||||||||||||||||||||||| || |||| |||||||||||||||||
seq2  TGAAAGTTTATAGAAACATTCTTAAAT-ATAC-TGAGTATATAAGTAGCA  948

seq1  AGTCTGTTCTGTGTT-CCTTTCTCATT-GTGAACCTGATTTTCCAAGGTC  997
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  AGTCTGTTCTGTGTTCCCTTTCTCATTGGTGAACCTGATTTTCCAAGGTC  998

seq1  ATCTGG-TGTGTGTGTGTATTTGTG-TGTCTGTCTGTCTGTCTGTCTGCC  1045
      |||||| || ||||| |  |||||| |||||||||||||||||| |||||
seq2  ATCTGGTTGGGTGTGGGATTTTGTGTTGTCTGTCTGTCTGTCTGACTGCC  1048

seq1  TATCTG  1051
      ||||||
seq2  TATCTG  1054