BAC Information

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BAC

Clone NameB6Ng01-058D07
Chromosome19 (Build37)
Map Location 48,656,628 - 48,786,048
singlet/doubletdoublet
Overlap geneSorcs3
Upstream geneSlk, Col17a1, 6330577E15Rik, D19Ertd652e, LOC677174, Gsto1, Gsto2, BC063749, Gm969, LOC670576
Downstream geneLOC100042896, LOC629448
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058D07.bB6Ng01-058D07.g
ACCDH879848DH879849
length9001,109
definitionDH879848|Mus musculus domesticus DNA, BAC clone: B6Ng01-058D07, 5' end.DH879849|Mus musculus domesticus DNA, BAC clone: B6Ng01-058D07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,656,628 - 48,657,530)(48,784,915 - 48,786,048)
sequence
gaattccttcttagaaattacccagaaacaacttaaatttttactgttca
gtgaaggcattgtgaaaatctgcctactgctatatgattctaactctgga
acatcttgggaatgcataactttggatttggtaaaaagaacaatggacac
tagaggctgagggggagaaaagatatatatggaacacagaattttacagt
aataacattgtttttgtatcataatatagcactaggcacttgtggctgta
catttgttaccaactgaatattacataagaaaggaatgatgcttacgcaa
agcatcggatttagctactcatctctctcagcattgactcatcaattata
acaaatgtatggcatttatgcaagatttaataatattaggagcgatgaga
aggtatggtgaactctgttttatcactgtgagtaataaactttaagttga
aatctccctgatgtaaatttattagcttttgtaaagctatccttaatttt
aataattgaaataatgcaaacacctactatttctatcatcagtgatgagt
tcttgcgaatgttagcagcatgtccttctcgggtatactgagaagtcagg
gaaggaggcgtacaggtgtgcttaagttgactggaagccaaataagcctg
aaatgtcaatgcctctttctggacacctggttcaatatggaacttttgga
tctaagcttccaagcatccatgagggccattaaatctaggttgaagggga
ctttaggagaggaaggaactgaaaaataaaatcactatgtgcttggtaag
acttgagagcagcctttttggttgttgttgttgggttttttgtttgtttg
ttttgtgtgtgtgtttgagagtcattacaggcatcacgaatgtgtgtgct

gaattcatctgcatcaagatgcctggtgcctttcctttctcttccttagc
tagaaattttatttttaagattcagtaagacatcatctctaattttgttt
cccagtttccccaatagaactaacttttccttcttcttcccatgatcatc
agaccattaaaataatacaatcaccctgaactatatttagctttatgtga
agttatttcctccatttaaatctgaactcattcaaggaaggaatgtcaaa
tcttaaagcttttgcctgatatcttgctgacattaaatatgtctgtgttg
actaatagtcacatgtgactacctacattaaacttaagtaaaaaatgcag
ttcacactcagcatatatcaaatacacaatggctgtgtagggcactgcta
tcatccctctgaggtactagatggatttttcttgtagttatatgtgtatt
aagctgtcttatagttactgatggctgagcctatagaactcttaaattat
cgctgacttccatggcttttctggtttcaacattctaatcctttcacttt
aaagataaagaagccaatggaggaagttgatgccaagattccttggcaca
ctaatgacagaaacagctccatcagtgtatccccaggaaccagaacaaca
tttagcatccagaggctgttacatacattttgctgaagggactatataac
cagccaacacaaggcaatgttttcctcttccaggtccaggtctcctccca
ctcaccatgacccctctaagctgccagttagatccagtaaactggatagc
tccttcaagacttttcaactacaaagtcacaaggagcctaggaatctgca
ggaagccgagatgttggcagactttcctctaaccattccccttctctcgg
aatctctgctcccctgtctcatgtgttgccccatcagagagatgacacac
cgatatcgtataggagagttcggagccatatacctgaacataaaatgatc
ttttgaattgtcagagcttatgttttaagtgtgctcaggttagaggaaga
gcatcagagtaaagtttcggaaggtgcttatgttattcttgaactttcaa
gatcgccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_48656628_48657530
seq2: B6Ng01-058D07.b_45_944

seq1  GAATTCCTTCTTAGAAATTACCCAGAAACAACTTAAATTTTTACTGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTTAGAAATTACCCAGAAACAACTTAAATTTTTACTGTTCA  50

seq1  GTGAAGGCATTGTGAAAATCTGCCTACTGCTATATGATTCTAACTCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGCATTGTGAAAATCTGCCTACTGCTATATGATTCTAACTCTGGA  100

seq1  ACATCTTGGGAATGCATAACTTTGGATTTGGTAAAAAGAACAATGGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTGGGAATGCATAACTTTGGATTTGGTAAAAAGAACAATGGACAC  150

seq1  TAGAGGCTGAGGGGGAGAAAAGATATATATGGAACACAGAATTTTACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCTGAGGGGGAGAAAAGATATATATGGAACACAGAATTTTACAGT  200

seq1  AATAACATTGTTTTTGTATCATAATATAGCACTAGGCACTTGTGGCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATTGTTTTTGTATCATAATATAGCACTAGGCACTTGTGGCTGTA  250

seq1  CATTTGTTACCAACTGAATATTACATAAGAAAGGAATGATGCTTACGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTACCAACTGAATATTACATAAGAAAGGAATGATGCTTACGCAA  300

seq1  AGCATCGGATTTAGCTACTCATCTCTCTCAGCATTGACTCATCAATTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCGGATTTAGCTACTCATCTCTCTCAGCATTGACTCATCAATTATA  350

seq1  ACAAATGTATGGCATTTATGCAAGATTTAATAATATTAGGAGCGATGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTATGGCATTTATGCAAGATTTAATAATATTAGGAGCGATGAGA  400

seq1  AGGTATGGTGAACTCTGTTTTATCACTGTGAGTAATAAACTTTAAGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGGTGAACTCTGTTTTATCACTGTGAGTAATAAACTTTAAGTTGA  450

seq1  AATCTCCCTGATGTAAATTTATTAGCTTTTGTAAAGCTATCCTTAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCCTGATGTAAATTTATTAGCTTTTGTAAAGCTATCCTTAATTTT  500

seq1  AATAATTGAAATAATGCAAACACCTACTATTTCTATCATCAGTGATGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTGAAATAATGCAAACACCTACTATTTCTATCATCAGTGATGAGT  550

seq1  TCTTGCGAATGTTAGCAGCATGTCCTTCTCGGGTATACTGAGAAGTCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCGAATGTTAGCAGCATGTCCTTCTCGGGTATACTGAGAAGTCAGG  600

seq1  GAAGGAGGCGTACAGGTGTGCTTAAGTTGACTGGAAGCCAAATAAGCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGGCGTACAGGTGTGCTTAAGTTGACTGGAAGCCAAATAAGCCTG  650

seq1  AAATGTCAATGCCTCTTTCTGGACACCTGGTTCAAATATGGAACTTTTGG  700
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAATGTCAATGCCTCTTTCTGGACACCTGGTTC-AATATGGAACTTTTGG  699

seq1  ATCTAAGCTTCCAAGCATCCATGAGGGCCATTAAATCTAGGTTGAAGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGCTTCCAAGCATCCATGAGGGCCATTAAATCTAGGTTGAAGGGG  749

seq1  ACTTTAGGAGAGGAAGGAACTGAAAAATAAAATCACTATGTGCTTGGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGGAGAGGAAGGAACTGAAAAATAAAATCACTATGTGCTTGGTAA  799

seq1  GACTTGAGAGCAGCCTTTTTGGTTGTTGTTGTTGGGTTTTTTGTTTGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGAGCAGCCTTTTTGGTTGTTGTTGTTGGGTTTTTTGTTTGTTT  849

seq1  GTTTTGTGTGTGTGTTTGTGTGTTTATTTACAGGCATCATGCATGTGTGT  900
      |||||||||||||||||| | |  |  |||||||||||| | ||||||||
seq2  GTTTTGTGTGTGTGTTTGAGAG--TCATTACAGGCATCACGAATGTGTGT  897

seq1  GCT  903
      |||
seq2  GCT  900

seq1: chr19_48784915_48786048
seq2: B6Ng01-058D07.g_67_1175 (reverse)

seq1  TAGGCGATCTTTAGAAAAAGTGTTCAAGAATTAACCATAAGCATCCTTCC  50
      |||||||||||  ||||    ||||||||||  | |||||||| ||||||
seq2  TAGGCGATCTT--GAAA----GTTCAAGAAT--AACATAAGCA-CCTTCC  41

seq1  GGGAACCTTTACTCTGATGCTCCTCCTCTAACCCTGAGCACACTTAAAAC  100
        ||| |||||||||||||||| |||||||| ||||||||||||||||||
seq2  --GAAACTTTACTCTGATGCTCTTCCTCTAA-CCTGAGCACACTTAAAAC  88

seq1  ATAAGCTTCCTGACAATTTCAAAAGATCATTTTATGTTTCAGGTAATATT  150
      |||||||  ||||||| ||||||||||||||||||| ||||||| ||| |
seq2  ATAAGCT--CTGACAA-TTCAAAAGATCATTTTATG-TTCAGGT-ATA-T  132

seq1  GGCTCCGAACTCTCCTATACGGATATCGGTGTGTTCATCTCCTCTGATGG  200
      |||||||||||||||||||| |||||||||||| |||||| ||||||| |
seq2  GGCTCCGAACTCTCCTATAC-GATATCGGTGTG-TCATCT-CTCTGAT-G  178

seq1  GGGCAACACATGGAGACAGGTGAGCAGAAGATTCCGAGAGAAGGGGGAAT  250
      ||||||||||| |||||||| |||||| |||||||||||||| |||||||
seq2  GGGCAACACAT-GAGACAGGGGAGCAG-AGATTCCGAGAGAA-GGGGAAT  225

seq1  GGTTAGAGGAAAGTCTGCCAACATCTCGGCTTCCTGCAGATTCCTAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGAGGAAAGTCTGCCAACATCTCGGCTTCCTGCAGATTCCTAGGCT  275

seq1  CCTTGTGACTTTGTAGTTGAAAAGTCTTGAAGGAGCTATCCAGTTTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGACTTTGTAGTTGAAAAGTCTTGAAGGAGCTATCCAGTTTACTG  325

seq1  GATCTAACTGGCAGCTTAGAGGGGTCATGGTGAGTGGGAGGAGACCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAACTGGCAGCTTAGAGGGGTCATGGTGAGTGGGAGGAGACCTGGA  375

seq1  CCTGGAAGAGGAAAACATTGCCTTGTGTTGGCTGGTTATATAGTCCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGAGGAAAACATTGCCTTGTGTTGGCTGGTTATATAGTCCCTTC  425

seq1  AGCAAAATGTATGTAACAGCCTCTGGATGCTAAATGTTGTTCTGGTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATGTATGTAACAGCCTCTGGATGCTAAATGTTGTTCTGGTTCCT  475

seq1  GGGGATACACTGATGGAGCTGTTTCTGTCATTAGTGTGCCAAGGAATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATACACTGATGGAGCTGTTTCTGTCATTAGTGTGCCAAGGAATCTT  525

seq1  GGCATCAACTTCCTCCATTGGCTTCTTTATCTTTAAAGTGAAAGGATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAACTTCCTCCATTGGCTTCTTTATCTTTAAAGTGAAAGGATTAG  575

seq1  AATGTTGAAACCAGAAAAGCCATGGAAGTCAGCGATAATTTAAGAGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGAAACCAGAAAAGCCATGGAAGTCAGCGATAATTTAAGAGTTCT  625

seq1  ATAGGCTCAGCCATCAGTAACTATAAGACAGCTTAATACACATATAACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTCAGCCATCAGTAACTATAAGACAGCTTAATACACATATAACTA  675

seq1  CAAGAAAAATCCATCTAGTACCTCAGAGGGATGATAGCAGTGCCCTACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAAATCCATCTAGTACCTCAGAGGGATGATAGCAGTGCCCTACAC  725

seq1  AGCCATTGTGTATTTGATATATGCTGAGTGTGAACTGCATTTTTTACTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGTGTATTTGATATATGCTGAGTGTGAACTGCATTTTTTACTTA  775

seq1  AGTTTAATGTAGGTAGTCACATGTGACTATTAGTCAACACAGACATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATGTAGGTAGTCACATGTGACTATTAGTCAACACAGACATATTT  825

seq1  AATGTCAGCAAGATATCAGGCAAAAGCTTTAAGATTTGACATTCCTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGCAAGATATCAGGCAAAAGCTTTAAGATTTGACATTCCTTCCT  875

seq1  TGAATGAGTTCAGATTTAAATGGAGGAAATAACTTCACATAAAGCTAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAGTTCAGATTTAAATGGAGGAAATAACTTCACATAAAGCTAAAT  925

seq1  ATAGTTCAGGGTGATTGTATTATTTTAATGGTCTGATGATCATGGGAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCAGGGTGATTGTATTATTTTAATGGTCTGATGATCATGGGAAGA  975

seq1  AGAAGGAAAAGTTAGTTCTATTGGGGAAACTGGGAAACAAAATTAGAGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAAAGTTAGTTCTATTGGGGAAACTGGGAAACAAAATTAGAGAT  1025

seq1  GATGTCTTACTGAATCTTAAAAATAAAATTTCTAGCTAAGGAAGAGAAAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTACTGAATCTTAAAAATAAAATTTCTAGCTAAGGAAGAGAAAG  1075

seq1  GAAAGGCACCAGGCATCTTGATGCAGATGAATTC  1134
      ||||||||||||||||||||||||||||||||||
seq2  GAAAGGCACCAGGCATCTTGATGCAGATGAATTC  1109