BAC Information

Click to search

BAC

Clone NameB6Ng01-058L21
Chromosome19 (Build37)
Map Location 35,093,928 - 35,094,706
singlet/doubletsinglet
Overlap genenone
Upstream geneLipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12, LOC676714, Pank1, Mphosph1
Downstream geneLOC383464, LOC100042292, A830019P07Rik, Htr7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058L21.bB6Ng01-058L21.g
ACCDH880237DH880238
length1,056779
definitionDH880237|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L21, 5' end.DH880238|Mus musculus domesticus DNA, BAC clone: B6Ng01-058L21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgacccttggagaaaagtagtagatcttatcagcatcggctca
tctctgaactctctactctagtctactggtcaatatatctgcccatatgg
taatataatactgttagattactaccatcttaaattgaggaggtatgtta
gcttttattttctctctcaagactaaattggtgccgaagtcttttgtaga
ttcatataaattttaagatggtttattctatgtgaaaagtactattggaa
tttaaatctttagaagtgcttatagtaggaaagacattttgacattatca
gttcttttaatctacaaatatagggtatctttctagtttttatactgaaa
tttatttaattttaatattgtagtttgaagcatgtggcaatttcactcat
ttgtaagttttgtctaagaatctcattgtttttagtgcttctgtaacaac
acagcttgcccttgcgtgttggttttgtatcctacagcttccctgagttc
atttgctagttttagcagttttcatatagtcattaggtatatctataaac
acagtaataaaataatgtaatttctcccttttaaatttggatgctatttc
ttgtgcccacataattgctctaccaacactttcaagtgaatgcagaacag
aagtagcaagaatgtatcaatcttaatggtgatataagaagaagctgtta
gccctgcccatcactgaatatggtttttaattatcttttaaagtcagcat
gtaggagtgcagaagtgtgtgtgtgtgtgtgtgtgtctacgtgtgagtga
ggttacaagactagctcaggtttgtcgggagcttggcggacctctcacca
tgcaggctagcggccgccatccttcaatcccaaaattgctccatgggcag
aaattatcaacgctagatcttgtccaggaacaactagattgtttattgaa
aatactcagctgggatgtgaataaatatttccgggatgtcgttaaattat
caggggcgctatatgtcaaaaagtcttctccagtatttttacaaaattga
ccgcgt
gaattctataatcatcgcctttaaaattttctactatacaagagaaggga
atgttttcagaaaatgttactttgttatgctcagtaaaatacttgagtaa
ttttcttgtaaacattaatgaacaaaactttattctggcaattgactcat
ttacttaccttgtttatgtgcactaagcaatctagtaagttttaattatt
cttctttttctctttttaaaaaaaatccctatcaaatgttcctacaagga
atggatttttgattggcttgtgctctcgaggcagaatacaataagcctaa
tagccccaagtagtactcaaaactgaactggcatgtgtcctgagtattcc
agactattatctctattatagaacacagctttattataaatccataggct
atgcatcccattaactacatactacttagcaaaccacgtctgtcttcgcc
actgtttctttcaccctttgtttggtatttctaattgatctggatctgag
atgctgagatagtctagggccccctactggaagcctgttttgggtgggtt
gtcatggaaggggtttctcagaaggataggctattaggcttaactgtcca
tgatttagcctgagaaaaagaggtattcataggaagataggtgcccagct
agtctaaaagaccattgtcagtctgatttggataccaaaacatactgttt
caccaaatactgacccctccccccaaacacagagagagagagagagagag
agagagagagagagagagtgggggggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_35093928_35094706
seq2: B6Ng01-058L21.g_67_845

seq1  GAATTCTATAATCATCGCCTTTAAAATTTTCTACTATACAAGAGAAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAATCATCGCCTTTAAAATTTTCTACTATACAAGAGAAGGGA  50

seq1  ATGTTTTCAGAAAATGTTACTTTGTTATGCTCAGTAAAATACTTGAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCAGAAAATGTTACTTTGTTATGCTCAGTAAAATACTTGAGTAA  100

seq1  TTTTCTTGTAAACATTAATGAACAAAACTTTATTCTGGCAATTGACTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGTAAACATTAATGAACAAAACTTTATTCTGGCAATTGACTCAT  150

seq1  TTACTTACCTTGTTTATGTGCACTAAGCAATCTAGTAAGTTTTAATTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTACCTTGTTTATGTGCACTAAGCAATCTAGTAAGTTTTAATTATT  200

seq1  CTTCTTTTTCTCTTTTTAAAAAAAATCCCTATCAAATGTTCCTACAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTTCTCTTTTTAAAAAAAATCCCTATCAAATGTTCCTACAAGGA  250

seq1  ATGGATTTTTGATTGGCTTGTGCTCTCGAGGCAGAATACAATAAGCCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTTTTGATTGGCTTGTGCTCTCGAGGCAGAATACAATAAGCCTAA  300

seq1  TAGCCCCAAGTAGTACTCAAAACTGAACTGGCATGTGTCCTGAGTATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCAAGTAGTACTCAAAACTGAACTGGCATGTGTCCTGAGTATTCC  350

seq1  AGACTATTATCTCTATTATAGAACACAGCTTTATTATAAATCCATAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATTATCTCTATTATAGAACACAGCTTTATTATAAATCCATAGGCT  400

seq1  ATGCATCCCATTAACTACATACTACTTAGCAAACCACGTCTGTCTTCGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCCCATTAACTACATACTACTTAGCAAACCACGTCTGTCTTCGCC  450

seq1  ACTGTTTCTTTCACCCTTTGTTTGGTATTTCTAATTGATCTGGATCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTCTTTCACCCTTTGTTTGGTATTTCTAATTGATCTGGATCTGAG  500

seq1  ATGCTGAGATAGTCTAGGGCCCCCTACTGGAAGCCTGTTTTGGGTGGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGATAGTCTAGGGCCCCCTACTGGAAGCCTGTTTTGGGTGGGTT  550

seq1  GTCATGGAAGGGGTTTCTCAGAAGGATAGGCTATTAGGCTTAACTGTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGAAGGGGTTTCTCAGAAGGATAGGCTATTAGGCTTAACTGTCCA  600

seq1  TGATTTAGCCTGAGAAAAAGAGGTATTCATAGGAAGATAGGTGCCCAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAGCCTGAGAAAAAGAGGTATTCATAGGAAGATAGGTGCCCAGCT  650

seq1  AGTCTAAAAGACCATTGTCAGTCTGATTTGGATACCAAAACATACTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAAAGACCATTGTCAGTCTGATTTGGATACCAAAACATACTGTTT  700

seq1  CACCAAATACTGACCCCTCCCCCCAAACACAGAGAGAGAGAGAGAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATACTGACCCCTCCCCCCAAACACAGAGAGAGAGAGAGAGAGAG  750

seq1  AGAGAGAGAGAGAGAGAGTGGGGGGAAGA  779
      ||||||||||||||||||||||||| |||
seq2  AGAGAGAGAGAGAGAGAGTGGGGGGGAGA  779