BAC Information

Click to search

BAC

Clone NameB6Ng01-058O10
Chromosome19 (Build37)
Map Location 33,703,895 - 33,704,977
singlet/doubletsinglet
Overlap genenone
Upstream genePapss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106
Downstream geneEG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058O10.bB6Ng01-058O10.g
ACCDH880352DH880353
length1,2781,078
definitionDH880352|Mus musculus domesticus DNA, BAC clone: B6Ng01-058O10, 5' end.DH880353|Mus musculus domesticus DNA, BAC clone: B6Ng01-058O10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaccggagaactactatagctgataaacaagcaaattgactgga
tataaaattaactgaaacaactcagtagccttcctataatcaaaggataa
aaaggctgagtaaaaattatggaaatggcacccttcacagtagttacaag
taatacaaaattccttggtgtgtctttaaccaatcaagtgaaagatatgt
atgacaagaacttcaagtctctaaagatgaaaatcaaaggagatctcaga
agatgaaaagatcttccttgctcagagattgaaataatactttaaaaatg
gccatctttccaaaagcattctaaagattcaatgtattccccatctaaat
tccaactcaattcttcatagagttacaaaaagtaatttgcaaattcattt
ggaatatcaaaaaaacacactatagcgaaaatattctcaataataataga
actcctggctgtatcaccatccacaatctcaagctgtattacagagcaac
agcgttaaaaactgtatgatactggtacagagacaggcaggtagatcaat
ggaatagaattgaagagccaggaattaacccacacacctatggtcatttg
atttttgacaaaggagttaaaaccatccagtggaaaaaagacagcatttt
caataaatggtgctggttcaactggcagtcaaaatatagaagaatgcgca
ttgatccattcttagttccttatacaacgctcaagttcaagtggatcaag
gacctccacaaaaaacaagatacactgaaactaatagaagagaacgtgga
aaagagtatcaaacacatgggaaaaatttcctgaacagaacaccagtggc
ttatgctgtaagatcaatgatagacagatgggacctcataaaatttcaaa
gcttctgtaaggcaaacgaccctgtcaataggacaaaatggcaactgaga
gattgggaaaagatatttaccaatcctacatccaacagagggctaatatc
caacatatacaaagaactcagagttagactccagagaatcaaataacact
tattaaaataggtaagagctagacaaagtttcctcatgtaatggccagga
agcaccttaagaatgttcacatcttattcatcaggaatgcaatcaaacac
tttggaatcacctccccagtcagatgctagataaattcgtgaagaatatt
gtgggatgtggcaaagaaacttcttgattgacaccgtttatcatatctcc
ttgaacgctcggattcgaaataacatgg
gaattcttaactgcataaccatctctccagacccagatgttaatatttaa
ttgaagagatttgttcctttagtacaaaatcaccgatctgctacatcaca
taaaaagaaaaattcataggcagatgttaactcttgaaaatcttaacatc
ttgaataaagttttttaataataatcgtttaaaatggtggcacactcctt
taattccagcacttgagaggcagaggcaggtgaatttctgagttggccac
acagagaaaccctgtctagaaaaaaaaacaaaaaaacaaaaagccaaaaa
agcaaagtaagaattagtgaagatgagagcatttatcaggaatgcagaga
acctgaccctgctgcagtgctgttctccctgcctcttagaataaccagga
agaaaagcacaactctctgcagtaataataggattattaaggaggcagga
ggcattaagtcttctcaaaagaagagttctgtgggattttttttttcagg
aaaaagaaaaacacattcttgttgcttttattttattttattttatttta
ttttattttattttatttttggttacatgaaaaatagtttcctgacaaca
aacttacttaacactgaaattctatttagttatttaaaaaatagaactaa
gatttcctgcctattagaatgagtgatattgtgctacttaaattattaac
agaacctcattgtattgtttccctcttttttttattaaattatttcatat
atttatattccagaaatttctcttcctcttggtccctactctccgagttc
ttcatccaatcccctcctctgttccaccttgagaggtactcccacactta
cctccaccagtatccatcttctctgaggcaacaagttttacaagaaatgc
tatcactgaggccatacaagcagtcttgtacataactctcttcatacacc
atagtatagtttcatataaattaaataaactagcaaagtgagttggacat
ctcagccccagtgtcattcatgctacacagtgacctctccactttttaag
aaaacatggaagtctcctttcatgcacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33703895_33704977
seq2: B6Ng01-058O10.g_69_1146 (reverse)

seq1  GGTGCATGAAA-GAGACTTCCATGTTTTCCTATAAAGTTGGAGAGGTCAC  49
      ||||||||||| ||||||||||||||||| || |||| ||||||||||||
seq2  GGTGCATGAAAGGAGACTTCCATGTTTTCTTAAAAAG-TGGAGAGGTCAC  49

seq1  TGTGTAGCATGAATGACACTGGGGCTGAGAATGTCCAACCTCACTTTGCT  99
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  TGTGTAGCATGAATGACACTGGGGCTGAG-ATGTCCAA-CTCACTTTGCT  97

seq1  AGTTTATTTAATTTATATGAAACTATACTATGGTGTATGAAGAGAGTTAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTTAATTTATATGAAACTATACTATGGTGTATGAAGAGAGTTAT  147

seq1  GTAACAAGACTGCCTTGTATGGCCTCAGTGATAGCATTTCTTGTAAAACT  199
      || ||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GT-ACAAGACTG-CTTGTATGGCCTCAGTGATAGCATTTCTTGTAAAACT  195

seq1  TGTTGCCTCAGAGAAGATGGATACTGGTGGAGGTAAGTGTGGGAGTAACC  249
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTTGCCTCAGAGAAGATGGATACTGGTGGAGGTAAGTGTGGGAGT-ACC  244

seq1  TCTCAAGGTGGAACAGAGGAGGGGATTGGATGAAGAACTCGGAGAGTAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGGTGGAACAGAGGAGGGGATTGGATGAAGAACTCGGAGAGTAGG  294

seq1  GACCAAGAGGAAGAGAAATTTCTGGAATATAAATATATGAAATAATTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGAGGAAGAGAAATTTCTGGAATATAAATATATGAAATAATTTAA  344

seq1  TAAAAAAAAGAGGGAAACAATACAATGAGGTTCTGTTAATAATTTAAGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAGAGGGAAACAATACAATGAGGTTCTGTTAATAATTTAAGTA  394

seq1  GCACAATATCACTCATTCTAATAGGCAGGAAATCTTAGTTCTATTTTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATATCACTCATTCTAATAGGCAGGAAATCTTAGTTCTATTTTTTA  444

seq1  AATAACTAAATAGAATTTCAGTGTTAAGTAAGTTTGTTGTCAGGAAACTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTAAATAGAATTTCAGTGTTAAGTAAGTTTGTTGTCAGGAAACTA  494

seq1  TTTTTCATGTAACCAAAAATAAAATAAAATAAAATAAAATAAAATAAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATGTAACCAAAAATAAAATAAAATAAAATAAAATAAAATAAAAT  544

seq1  AAAATAAAAGCAACAAGAATGTGTTTTTCTTTTTCCTGAAAAAAAAAATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAGCAACAAGAATGTGTTTTTCTTTTTCCTGAAAAAAAAAATC  594

seq1  CCACAGAACTCTTCTTTTGAGAAGACTTAATGCCTCCTGCCTCCTTAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAACTCTTCTTTTGAGAAGACTTAATGCCTCCTGCCTCCTTAATA  644

seq1  ATCCTATTATTACTGCAGAGAGTTGTGCTTTTCTTCCTGGTTATTCTAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATTATTACTGCAGAGAGTTGTGCTTTTCTTCCTGGTTATTCTAAG  694

seq1  AGGCAGGGAGAACAGCACTGCAGCAGGGTCAGGTTCTCTGCATTCCTGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGAGAACAGCACTGCAGCAGGGTCAGGTTCTCTGCATTCCTGAT  744

seq1  AAATGCTCTCATCTTCACTAATTCTTACTTTGCTTTTTTGGCTTTTTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCTCATCTTCACTAATTCTTACTTTGCTTTTTTGGCTTTTTGTT  794

seq1  TTTTTGTTTTTTTTTCTAGACAGGGTTTCTCTGTGTGGCCAACTCAGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTTTTTCTAGACAGGGTTTCTCTGTGTGGCCAACTCAGAAA  844

seq1  TTCACCTGCCTCTGCCTCTCAAGTGCTGGAATTAAAGGAGTGTGCCACCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTGCCTCTGCCTCTCAAGTGCTGGAATTAAAGGAGTGTGCCACCA  894

seq1  TTTTAAACGATTATTATTAAAAAACTTTATTCAAGATGTTAAGATTTTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACGATTATTATTAAAAAACTTTATTCAAGATGTTAAGATTTTCA  944

seq1  AGAGTTAACATCTGCCTATGAATTTTTCTTTTTATGTGATGTAGCAGATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAACATCTGCCTATGAATTTTTCTTTTTATGTGATGTAGCAGATC  994

seq1  GGTGATTTTGTACTAAAGGAACAAATCTCTTCAATTAAATATTAACATCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTTGTACTAAAGGAACAAATCTCTTCAATTAAATATTAACATCT  1044

seq1  GGGTCTGGAGAGATGGTTATGCAGTTAAGAATTC  1083
      ||||||||||||||||||||||||||||||||||
seq2  GGGTCTGGAGAGATGGTTATGCAGTTAAGAATTC  1078