BAC Information

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BAC

Clone NameB6Ng01-060B09
Chromosome19 (Build37)
Map Location 32,391,851 - 32,539,740
singlet/doubletdoublet
Overlap gene2700046G09Rik, LOC100042138, LOC672490
Upstream genePrkg1, 1810073H04Rik, Asah2, EG668042, Sgms1
Downstream geneLOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060B09.bB6Ng01-060B09.g
ACCDH881168DH881169
length1,093584
definitionDH881168|Mus musculus domesticus DNA, BAC clone: B6Ng01-060B09, 5' end.DH881169|Mus musculus domesticus DNA, BAC clone: B6Ng01-060B09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,538,623 - 32,539,740)(32,391,851 - 32,392,434)
sequence
gaattcttaggctgatggtgtctctattacagcacattgcccagctaatc
acaatctttatgtacacatgtatgcccttcattcccttgtcacctcagtt
gggtcagcctcaaagccaggcaggtagttgtaatcccactccctaccccc
attcctgggatttaacccaggacatcacacatgccgagcaactgcagtac
cactgagctatagcccaggctcactggggaaaagcacttgaatagaaaca
tctcagaggatgaaaactttgtttcagaagagtgaatgacagagttatga
aagcttcatacaatttgaatttgttaaatcttagcaaagccccagcttac
tctgcatgcattaaaaaaaatagactataatctgaatagctagcttctgg
ggtaagaatagatttaagtgactatagaagacaggcattgcagagcaagc
atgttgataatgactggagagagggcgcagtgcttaagagtacatgttac
tcttccagaagacctgagtttgagttcctgcacctatgtcaagcatctca
cagccacctgtaacccagctccaggagatctgacagctctgcctcagtgg
gcacctgactcctgtgcacatgagcccactccccacaggcacacacatat
acttaatttcattataataaaataatcaaaaaagcgtcctctagaataga
aatactgggagtatcttggggaaaagtgttactgctctagttggtggcat
gaatggtagagtgggatctaaaagacgaggtggactcaactcatgcttta
ttcagagcatcggacaagttatactctgagagttaagaagagtcacctga
gtaaagtgtgcaatcacgagggaaatatttttcccatagaggcacagaat
aacactaaagcaactgctcctatcttttaccctggggagagcatgaaaca
taacccagaacacttccatgttcagaggatcgaggtacagacttggttct
gatttcttgagttttacaaccattcgagatctcacaatctccatcttgga
ctggttccaacgaaaagaaatagaaatgggattataatgtact
gaattctagcaaggtcagggctgtctgcagtcttcctcagaattcagtgt
ggggcggggtaggggatttctctgggagctgctatcttgttatggttatt
tctctgagaacagctaatattattttggcagttggaagcttagtcatttt
gaccactaaaactatgtttttacatttatttagtcaaccagcttccttat
ctggctctgcacttggcctgctagtgcagtttggaaagtccttttctaag
ggggaaggtactgggtggtcttgaattcattttggatattacagtggcat
gctggatgttagcatgcagagagagagtgttatataaaaagcaggaatgc
tgaataaaatgattcaaattaatcatttctcaatattagttgtggttgac
atacagtactatcattagaaaggtaaagcttatgttaaaactgtctgacg
ctaccatccagtctcaccccatcctccaactgcagttgttactttttaaa
ttattattattattttgtttgttttttgtttgttgttttgtttattattt
tgtttggttttttttgttgttgatggtggttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32538623_32539740
seq2: B6Ng01-060B09.b_44_1136 (reverse)

seq1  AGTACATAAATAAGTCCCATATTCTATTTCTTTTCTGTTGGAACACAGTC  50
      |||||||  |||| |||||| |||||||||||||| |||||||| |||||
seq2  AGTACAT-TATAA-TCCCAT-TTCTATTTCTTTTC-GTTGGAAC-CAGTC  45

seq1  CAAGAATGGAGATTTGTGAGATCTCTGAATGGTTGTGAGAAAACTCCAAG  100
      |||| ||||||| |||||||||||| ||||||||||   |||||| ||||
seq2  CAAG-ATGGAGA-TTGTGAGATCTC-GAATGGTTGT---AAAACT-CAAG  88

seq1  AAATCAGAATACAAGTCTTGTAACCTCGGATTCTTCTGAACATGGAAGTG  150
      |||||||||  |||||| ||| ||||||   || ||||||||||||||||
seq2  AAATCAGAA-CCAAGTC-TGT-ACCTCG--ATCCTCTGAACATGGAAGTG  133

seq1  TTCTTGGGTTATGTTTTCATGCTCCTCCCAGGTGTAAAAGATAGGAGCAA  200
      ||| ||||||||| ||||||||||  |||||| |||||||||||||||| 
seq2  TTC-TGGGTTATG-TTTCATGCTCTCCCCAGG-GTAAAAGATAGGAGCA-  179

seq1  GTTTGCTTTAGTTGTTATTCTTGTGCCTCTATGGGAAAAATATTTCCCTC  250
        ||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  -GTTGCTTTAG-TGTTATTC-TGTGCCTCTATGGGAAAAATATTTCCCTC  226

seq1  GTGATTGCACACTTTACTCAGGTGACTCTTCTTAACTCTCAGAGTATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGCACACTTTACTCAGGTGACTCTTCTTAACTCTCAGAGTATAAC  276

seq1  TTGTCCGATGCTCTGAATAAAGCATGAGTTGAGTCCACCTCGTCTTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCGATGCTCTGAATAAAGCATGAGTTGAGTCCACCTCGTCTTTTAG  326

seq1  ATCCCACTCTACCATTCATGCCACCAACTAGAGCAGTAAACACTTTTCCC  400
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCCCACTCTACCATTCATGCCACCAACTAGAGCAGT-AACACTTTTCCC  375

seq1  CAAGATACTCCCAGTATTTCTATTCTAGAGGACGCTTTTTTGATTATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATACTCCCAGTATTTCTATTCTAGAGGACGCTTTTTTGATTATTTT  425

seq1  ATTATAATGAAATTAAGTATATGTGTGTGCCTGTGGGGAGTGGGCTCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATGAAATTAAGTATATGTGTGTGCCTGTGGGGAGTGGGCTCATG  475

seq1  TGCACAGGAGTCAGGTGCCCACTGAGGCAGAGCTGTCAGATCTCCTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGGAGTCAGGTGCCCACTGAGGCAGAGCTGTCAGATCTCCTGGAG  525

seq1  CTGGGTTACAGGTGGCTGTGAGATGCTTGACATAGGTGCAGGAACTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTACAGGTGGCTGTGAGATGCTTGACATAGGTGCAGGAACTCAAA  575

seq1  CTCAGGTCTTCTGGAAGAGTAACATGTACTCTTAAGCACTGCGCCCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCTTCTGGAAGAGTAACATGTACTCTTAAGCACTGCGCCCTCTC  625

seq1  TCCAGTCATTATCAACATGCTTGCTCTGCAATGCCTGTCTTCTATAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCATTATCAACATGCTTGCTCTGCAATGCCTGTCTTCTATAGTCA  675

seq1  CTTAAATCTATTCTTACCCCAGAAGCTAGCTATTCAGATTATAGTCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATCTATTCTTACCCCAGAAGCTAGCTATTCAGATTATAGTCTATT  725

seq1  TTTTTTAATGCATGCAGAGTAAGCTGGGGCTTTGCTAAGATTTAACAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATGCATGCAGAGTAAGCTGGGGCTTTGCTAAGATTTAACAAAT  775

seq1  TCAAATTGTATGAAGCTTTCATAACTCTGTCATTCACTCTTCTGAAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTGTATGAAGCTTTCATAACTCTGTCATTCACTCTTCTGAAACAA  825

seq1  AGTTTTCATCCTCTGAGATGTTTCTATTCAAGTGCTTTTCCCCAGTGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCATCCTCTGAGATGTTTCTATTCAAGTGCTTTTCCCCAGTGAGC  875

seq1  CTGGGCTATAGCTCAGTGGTACTGCAGTTGCTCGGCATGTGTGATGTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTATAGCTCAGTGGTACTGCAGTTGCTCGGCATGTGTGATGTCCT  925

seq1  GGGTTAAATCCCAGGAATGGGGGTAGGGAGTGGGATTACAACTACCTGCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAATCCCAGGAATGGGGGTAGGGAGTGGGATTACAACTACCTGCC  975

seq1  TGGCTTTGAGGCTGACCCAACTGAGGTGACAAGGGAATGAAGGGCATACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGAGGCTGACCCAACTGAGGTGACAAGGGAATGAAGGGCATACA  1025

seq1  TGTGTACATAAAGATTGTGATTAGCTGGGCAATGTGCTGTAATAGAGACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACATAAAGATTGTGATTAGCTGGGCAATGTGCTGTAATAGAGACA  1075

seq1  CCATCAGCCTAAGAATTC  1118
      ||||||||||||||||||
seq2  CCATCAGCCTAAGAATTC  1093

seq1: chr19_32391851_32392434
seq2: B6Ng01-060B09.g_70_653

seq1  GAATTCTAGCAAGGTCAGGGCTGTCTGCAGTCTTCCTCAGAATTCAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCAAGGTCAGGGCTGTCTGCAGTCTTCCTCAGAATTCAGTGT  50

seq1  GGGGCGGGGTAGGGGATTTCTCTGGGAGCTGCTATCTTGTTATGGTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGGGGTAGGGGATTTCTCTGGGAGCTGCTATCTTGTTATGGTTATT  100

seq1  TCTCTGAGAACAGCTAATATTATTTTGGCAGTTGGAAGCTTAGTCATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGAACAGCTAATATTATTTTGGCAGTTGGAAGCTTAGTCATTTT  150

seq1  GACCACTAAAACTATGTTTTTACATTTATTTAGTCAACCAGCTTCCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTAAAACTATGTTTTTACATTTATTTAGTCAACCAGCTTCCTTAT  200

seq1  CTGGCTCTGCACTTGGCCTGCTAGTGCAGTTTGGAAAGTCCTTTTCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCTGCACTTGGCCTGCTAGTGCAGTTTGGAAAGTCCTTTTCTAAG  250

seq1  GGGGAAGGTACTGGGTGGTCTTGAATTCATTTTGGATATTACAGTGGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGTACTGGGTGGTCTTGAATTCATTTTGGATATTACAGTGGCAT  300

seq1  GCTGGATGTTAGCATGCAGAGAGAGAGTGTTATATAAAAAGCAGGAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATGTTAGCATGCAGAGAGAGAGTGTTATATAAAAAGCAGGAATGC  350

seq1  TGAATAAAATGATTCAAATTAATCATTTCTCAATATTAGTTGTGGTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAAATGATTCAAATTAATCATTTCTCAATATTAGTTGTGGTTGAC  400

seq1  ATACAGTACTATCATTAGAAAGGTAAAGCTTATGTTAAAACTGTCTGACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTACTATCATTAGAAAGGTAAAGCTTATGTTAAAACTGTCTGACG  450

seq1  CTACCATCCAGTCTCACCCCATCCTCCAACTGCAGTTGTTACTTTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATCCAGTCTCACCCCATCCTCCAACTGCAGTTGTTACTTTTTAAA  500

seq1  TTATTATTATTATTTTGTTTGTTTTTTGTTTGTTGTTTTGTTTATTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATTATTTTGTTTGTTTTTTGTTTGTTGTTTTGTTTATTATTT  550

seq1  TGTTTGGTTTTTTTTGTTGTTGATGGTGGTTTTT  584
      ||||||||||||||||||||||||||||||||||
seq2  TGTTTGGTTTTTTTTGTTGTTGATGGTGGTTTTT  584