BAC Information

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BAC

Clone NameB6Ng01-064H22
Chromosome19 (Build37)
Map Location 49,054,724 - 49,055,280
singlet/doubletsinglet
Overlap genenone
Upstream geneGm969, LOC670576, Sorcs3, LOC100042896
Downstream geneLOC629448, Siah1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064H22.bB6Ng01-064H22.g
ACCDH884267DH884268
length5951,254
definitionDH884267|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H22, 5' end.DH884268|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttatgatgaatgcatgttggatcttg
tcgaatgctttttccgtgtctaaggagatgatcatgtggtttttgtcttg
aagtttgtttatataatggattatgttgatggatttccttatattaaacc
atccctgcatccctggaataaaacctacttggtcaggaaggatgattgct
ttaatatgttcttggattcggttagcaaaaattttattgaggatttttgc
atctatattcataagggaatttggtctgaagttctctatctttgttggat
ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggcagagtaccttctgtttttattttatggaatagtttgtgaagaactgg
aattaaatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctggttttttttttttttttttttttttttttttttttttttttttt
ttgggggcgggggaatattaaagaccgcttctattttttttggggaaatg
aaaatggttaaatcattaacttgatcccgatttaactttgggacc
gaattctttgtttagctctgtatcccatttttaatagggttatttgtttc
tcttgagtctgacttcttgagttctttgtatatattggatattagctgtc
tattgaacttaggattggtaaagatcttttcctaatccactggttgcatt
ttgtgttattgacagtgtcctttgccttacaaaaactttgcaattttatg
aggtccaatttgttgattcttgatcttacagcacaagccatttgtgttgt
gttcagaaattttcctctgtgcccatatacttgaggatcttccccacttt
ctcctctttaagtttcagtgtatctggttttatgtggagttccttgactc
acttggacttgagctttttacaaggagataagaatgtatcaatttgcatt
cttctacatgctaactgccagttgagccagcactatttgttgaaaatgtt
gtcttttttccacaggatggttatagctcccttgtcaaagatcaagtgac
cataggtgtgtggattcatttctggatcttcagttatattccattgatct
acctgtctgtcattgtaccagtaccatgcagtttttatcacaattgctct
gtagtacagcttgaggtcaatgatagtgattccaccagaagttcttttag
tattgagaatagttttcgctattctaggttttttgttattccagatgaaa
ttgcaaattgccctttctaactttgtgaagaattgagttggaattttgat
ggggattgcattgaatctgtagattgctttcagcaagatggccattttta
ctatattattcctgccaatccatgatcatgggaaatctttccatcgtctg
aagaccttggatttctttcttcagagacttgaagttcttatcatacagat
ctttcacttgctaagttagagtcacaccaaggtattttaatataattttg
actattatgaagtatgctgttctctaattctaagcctatttatcttttgt
gtagaggaaagccattgatttgttgagtagttttaatccagacgcgaatg
tcgggcaggatgtgggaaaagagaacccttctccttgtgatgggattgag
actctctcaaacattagaatcagttggcggtcctccagaaatgagacagt
atctgtgacagcataccatctcgtggtattcctaaaggtctacgtgtatg
agacactccgctgtgtcggagctcttcattaccgacagcgtgagagacca
gact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_49054724_49055280
seq2: B6Ng01-064H22.b_49_643 (reverse)

seq1  GGTACCAAAGTTGAGTCAGGATCAAGTTGACCATCTAAACAGTCCCATAT  50
      ||| |||||||| | || |||||||||| |  || ||| || |  ||| |
seq2  GGTCCCAAAGTTAAATCGGGATCAAGTTAATGATTTAACCATTTTCATTT  50

seq1  CACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCC---------  91
      | || ||| |||||||||| ||  |||||| || |||  ||         
seq2  CCCCAAAAAAAATAGAAGCGGTCTTTAATATTCCCCCGCCCCCAAAAAAA  100

seq1  -----------------------------AAAAAAAGCCCAGGACCAGAC  112
                                   |||||||  ||||||||||| 
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGGACCAGAT  150

seq1  GGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAGT  162
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATTTAATTCCAGT  200

seq1  TCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTACCCAACT  212
      ||| ||||||||||| || |||||| ||  |||||||||||| |||||||
seq2  TCTTCACAAACTATTCCATAAAATAAAAACAGAAGGTACTCTGCCCAACT  250

seq1  CATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATTCA  262
      |||| ||||||||||| ||||||||||||||||||||||| |||||| ||
seq2  CATTCTATGAAGCCACAATTACTCTGATACCTAAACCACAAAAAGATCCA  300

seq1  ACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATATTGATGCAAA  312
      ||||||||||||||||||||||||| ||| ||||||||||| ||||||||
seq2  ACAAAGATAGAGAACTTCAGACCAAATTCCCTTATGAATATAGATGCAAA  350

seq1  AATCCTCAATAAAATTCTTGCTAACCGAATCCAAGAACATATTAAAGCAA  362
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATCCTCAATAAAATTTTTGCTAACCGAATCCAAGAACATATTAAAGCAA  400

seq1  TCATCCATCCTGACCAAGTAGGTTTTATTCCAGGAATGCAGGGATGGTTT  412
      |||||| ||||||||||||||||||||||||||| |||||||||||||||
seq2  TCATCCTTCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTT  450

seq1  AATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGA  462
      |||||| | |||||||||||  ||||||||||||||||||||||  ||||
seq2  AATATAAGGAAATCCATCAACATAATCCATTATATAAACAAACTTCAAGA  500

seq1  CAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAAGA  512
      ||||||||||||||||||||| |||||  | ||||||||||| |||||||
seq2  CAAAAACCACATGATCATCTCCTTAGACACGGAAAAAGCATTCGACAAGA  550

seq1  TTCAACACCCATTCATGATAAAAGTTTTGGAAAGATCAGGAATTC  557
      | |||||  ||||||| |||||||| |||||||||||||||||||
seq2  TCCAACATGCATTCATCATAAAAGTCTTGGAAAGATCAGGAATTC  595