BAC Information

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BAC

Clone NameB6Ng01-064P03
Chromosome2 (Build37)19 (Build37)
Map Location 57,126,931 - 57,127,0198,092,849 - 8,094,031
singlet/doubletsingletsinglet
Overlap geneGpd2
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910
Downstream geneLOC271788, Galnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064P03.bB6Ng01-064P03.g
ACCDH884583DH884584
length9691,153
definitionDH884583|Mus musculus domesticus DNA, BAC clone: B6Ng01-064P03, 5' end.DH884584|Mus musculus domesticus DNA, BAC clone: B6Ng01-064P03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(57,126,931 - 57,127,019)(8,092,849 - 8,094,031)
sequence
gaattctcaactgaggactaacaaatggctgagaagcacctgaaaacatg
ttaaacatccttagtcatcagggaaatgcaaatcaaaacaacccagagat
tccacctcataccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctgttgaggatgtggagaaagaggaacactcctttgttgctggtg
ggattgcaagctggtacaaccactctggaaatcaatttggcattcctcag
aaaattggtcatagttctaccagaagatccagcaataccactcctgctca
tatacccagaagatgctccaaattgtaataaggacacatgctccactatg
ttcataacagccttattaaccatagccagaagctcgaatgaacctagatg
cccctcgaaagagaaatggatacagaaaatgtggtacatttacacagtgg
agtattattcagctattaaaaacaatgaatttatggaattcttagacaaa
tagatgtatctagaggatatcatcctaagtgatgtaacccaatcacaaaa
gaacacacatggtatgtactcacagataagtggatattacccaagaagct
cagagtacccaagatacaatttgcaaaacacatgaaactcaagaagaagg
aaggttaaagtgtggatactttggatccttcttagaagggggaataaatt
acccatggaaaggatttacagagacaaatttcagagcagagtctgaggca
tgcctacccagaaactgccccatctggggatgcatcccataaacaccacc
aaaaccagacactattacagatgacacaaaagcttgcagtcaggagagtg
atatagctgtctcctgagaggctctgcagtgtctgactaatacgaggctg
atgctcccagtcatccattagatggaatacagggtccccagtgaggacta
gagaagtaccctaggactg
gaattcctgatctttccaagacttttatcatgcacaggtgttggattttt
tcaaaagctttctcagcatctaatgagatgatcatgtggtctttttcttt
gagtttgtttgtatagtgtcctgacccgtgggacccagttatttggaggc
ccgagggggaccttgcctgaaagagaaacgggcgggaaagaaaaaggaga
ccaagtagacaatcctatcaaggtctgtttattgtgagtaaagttacaga
ataaaagcggtaagaaggaggaagtaaagagggagaaacttgcccgtgcc
tcagcccgcgggcaggggtgattctgcacaactgcccgggagcatgctat
ctttcttagctcaggaaacatcctgtggttctttctggaagtttacagtt
actattatctgatcttgatgttctccgatgtcatttcaaaaggttggaag
tctctctagaagggagcggaactttggcttatgactcagtgtcagtttcc
aacatctctcaaaaggtcagaagtttctcaagaagggaggggaactttgg
cttatggttcaatgtcagtctccaacatctccccctcttttacattatag
atggagctttcagcctttgtccatatggaagatggagcatttgacttagg
ctacatgaagtgtatccacaaccaccacccaaagtggttgatttttgagg
gtagagtctctgtgttaggctatgtgagttgcccccacatccagcactct
tatctcagagtgggcccctggattatggactcacaataatcccatcattg
aggtgctctacagcctatcatgggtgtgcctctggtatgtggcagcatgc
tatttccaaccttgatgtctcatagcttgccaaaccatccaggattgttt
tctgtatctaagctgtgaaatctaagcctgctgagagcgtctgggctcag
catatactctttatcatgtgaggagccgccttgcatcaccattacagatg
gtgctgacatccgtttctactggtaaacagtagtttgcgcatggggctgg
ggtattttctattctgtgacctgctttccgtggctcatcctggctgatgg
tgacagccatccaggcagagcacttcacgccttctgggctataaaaggac
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57126931_57127019
seq2: B6Ng01-064P03.b_585_673 (reverse)

seq1  TTTTGCAAATTGTATCTTGGGTATTCTAAGTTTCTGGGCTAATATCCGCT  50
      ||||||||||||||||||||||| ||| || |||| || |||||||| ||
seq2  TTTTGCAAATTGTATCTTGGGTACTCTGAGCTTCTTGGGTAATATCCACT  50

seq1  TATCAGTGAGTGCATATCATGTGTGTTCTTTTCTGATTG  89
      |||| |||||| |||| ||||||||||||||| ||||||
seq2  TATCTGTGAGTACATACCATGTGTGTTCTTTTGTGATTG  89

seq1: chr19_8092849_8094031
seq2: B6Ng01-064P03.g_67_1219

seq1  GAATTCCTGATCTTTCCAAGACTTTTATCATGCACAGGTGTTGGATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATCTTTCCAAGACTTTTATCATGCACAGGTGTTGGATTTTT  50

seq1  TCAAAAGCTTTCTCAGCATCTAATGAGATGATCATGTGGTCTTTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGCTTTCTCAGCATCTAATGAGATGATCATGTGGTCTTTTTCTTT  100

seq1  GAGTTTGTTTGTATAGTGTCCTGACCCGTGGGACCCAGTTATTTGGAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGTTTGTATAGTGTCCTGACCCGTGGGACCCAGTTATTTGGAGGC  150

seq1  CCGAGGGGGACCTTGCCTGAAAGAGAAACGGGCGGGAAAGAAAAAGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGGGGACCTTGCCTGAAAGAGAAACGGGCGGGAAAGAAAAAGGAGA  200

seq1  CCAAGTAGACAATCCTATCAAGGTCTGTTTATTGTGAGTAAAGTTACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAGACAATCCTATCAAGGTCTGTTTATTGTGAGTAAAGTTACAGA  250

seq1  ATAAAAGCGGTAAGAAGGAGGAAGTAAAGAGGGAGAAACTTGCCCGTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCGGTAAGAAGGAGGAAGTAAAGAGGGAGAAACTTGCCCGTGCC  300

seq1  TCAGCCCGCGGGCAGGGGTGATTCTGCACAACTGCCCGGGAGCATGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCGCGGGCAGGGGTGATTCTGCACAACTGCCCGGGAGCATGCTAT  350

seq1  CTTTCTTAGCTCAGGAAACATCCTGTGGTTCTTTCTGGAAGTTTACAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTAGCTCAGGAAACATCCTGTGGTTCTTTCTGGAAGTTTACAGTT  400

seq1  ACTATTATCTGATCTTGATGTTCTCCGATGTCATTTCAAAAGGTTGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTATCTGATCTTGATGTTCTCCGATGTCATTTCAAAAGGTTGGAAG  450

seq1  TCTCTCTAGAAGGGAGCGGAACTTTGGCTTATGACTCAGTGTCAGTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTAGAAGGGAGCGGAACTTTGGCTTATGACTCAGTGTCAGTTTCC  500

seq1  AACATCTCTCAAAAGGTCAGAAGTTTCTCAAGAAGGGAGGGGAACTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCTCAAAAGGTCAGAAGTTTCTCAAGAAGGGAGGGGAACTTTGG  550

seq1  CTTATGGTTCAATGTCAGTCTCCAACATCTCCCCCTCTTTTACATTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGGTTCAATGTCAGTCTCCAACATCTCCCCCTCTTTTACATTATAG  600

seq1  ATGGAGCTTTCAGCCTTTGTCCATATGGAAGATGGAGCATTTGACTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCTTTCAGCCTTTGTCCATATGGAAGATGGAGCATTTGACTTAGG  650

seq1  CTACATGAAGTGTATCCACAACCACCACCCAAAGTGGTTGATTTTTGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGAAGTGTATCCACAACCACCACCCAAAGTGGTTGATTTTTGAGG  700

seq1  GTAGAGTCTCTGTGTTAGGCTATGTGAGTTGCCCCCACATCCAGCACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTCTCTGTGTTAGGCTATGTGAGTTGCCCCCACATCCAGCACTCT  750

seq1  TATCTCAGAGTGGGCCCCTGGATTATGGACTCACAATAATCCCATCATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGAGTGGGCCCCTGGATTATGGACTCACAATAATCCCATCATTG  800

seq1  AGGTGCTCTACAGCCTATCATGGGTGTGCCTCTGGTATGTGGCAGCATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTCTACAGCCTATCATGGGTGTGCCTCTGGTATGTGGCAGCATGC  850

seq1  TATTTCCAACCTTGATGTCTCCATAGCTTGCCAAACCATCCAGGATTGTT  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATTTCCAACCTTGATGTCT-CATAGCTTGCCAAACCATCCAGGATTGTT  899

seq1  TTCTGTATCTAAGGCTGTGAAATCTAAGCCTGCTGAAGGAGCGTCTGGGG  950
      |||||||||||| |||||||||||||||||||||||  ||||||||  ||
seq2  TTCTGTATCTAA-GCTGTGAAATCTAAGCCTGCTGA--GAGCGTCT--GG  944

seq1  GCTCAGCATATACCTCTTTATCAATGTGAGGAGCCGCCCTTGCAATCACC  1000
      |||||||||||| ||||||||| ||||||||||||| |||||| ||||||
seq2  GCTCAGCATATA-CTCTTTATC-ATGTGAGGAGCCG-CCTTGC-ATCACC  990

seq1  ATTACAAGATGGTGCTGACATCCAGTGTTCTAACTGGTAAACAAGTAGTT  1050
      ||||| ||||||||||||||||| || |||| |||||||||| |||||||
seq2  ATTAC-AGATGGTGCTGACATCC-GT-TTCT-ACTGGTAAAC-AGTAGTT  1035

seq1  TGCGCAT-GTGCTGGGGTATTTTTCTATTCCTTGTGCCCTGCCTTTCCCG  1099
      ||||||| | ||||||||| ||||||||||  |||| |||||  || |||
seq2  TGCGCATGGGGCTGGGGTA-TTTTCTATTC--TGTGACCTGC--TTTCCG  1080

seq1  TGGCGTCATCTGGGCTGATGGTGAGCAGCCAATCAGGGCGAGGCACGTCT  1149
      |||| |||||  |||||||||||| ||||||  ||||  || |||| || 
seq2  TGGC-TCATCCTGGCTGATGGTGA-CAGCCATCCAGGCAGA-GCACTTC-  1126

seq1  CCAACCGCTCTTCGTGGGCTATAAAAGGGACAGG  1183
           ||| |||| |||||||||||| |||||||
seq2  ----ACGC-CTTC-TGGGCTATAAAA-GGACAGG  1153