BAC Information

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BAC

Clone NameB6Ng01-065I08
Chromosome19 (Build37)
Map Location 12,645,454 - 12,753,342
singlet/doubletdoublet
Overlap gene4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443
Upstream geneLOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046
Downstream geneKeg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065I08.bB6Ng01-065I08.g
ACCDH884970DH884971
length1,1301,080
definitionDH884970|Mus musculus domesticus DNA, BAC clone: B6Ng01-065I08, 5' end.DH884971|Mus musculus domesticus DNA, BAC clone: B6Ng01-065I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,752,193 - 12,753,342)(12,645,454 - 12,646,540)
sequence
gaattcttagaaagtagggcactgataattttataaacatcattcagctc
tttattgacaaatttttaatatttttaaagacagaattaactctgcattt
taaaaaaaaaatggttcaagactccatactcggtgctcaaatgactcaca
gtactaatgctatgatcctgtgagatttacttttcactaaaagcagatgg
taaatacagaaccttaccttgctctttgaacaagagtgacagtcagttat
gaacagagttggcaataagaattccttttgtggagtaactcacaggtatc
atcagagggtctctctgacagggaataatcaaaaggttaggagctttcta
aagcaacaaaaacacagaaaaaagacactcaaacatgtccatccatgaat
ttactatgaactctctctgtgtccttagaagggtatcttacttcttcctt
gcctgtaaaagaaagattataatgttgcctctctcatatattccacagag
cagtatttgtagaatataagtggaggaaggtacacaggaaatcttgctaa
ctgatcatttctatgaggctgattaatacagccttgggtatttttttttc
aaccatggttgaagattctcagaaaatctccagttcagaagaaaaccggt
gtgtttgggaaaatattaacattcaggtggcttagtgatggccaaacatg
gtcaccttgccatcatggtcttctaaagcgattgactttaaaggacaatg
aataagagctagccaggcactatggatggagtccatgagctctctggggc
ttttccccatggggcacctgtaggtcttcattgcaccttcataatggaaa
accaaagtctcactgggtctaagatgggttatttaaatgtattttttatc
acatactattttcctcctttctccagttaatgttaacttataaacaccaa
tattttagtacaaagttttcacggtttggtcaaagtatatcatgttacca
ctcccatgacatcttcattacttttcagctcttgagcacagtgagctatt
ctttctacagtagcgtaaacacaaaccttttttggttgtttactttatct
ttgtgacattgcgactgtgttacatcaatg
gaattctttaaaaaggatgttttttccctttttgaagtattatacagttc
actttggtctcaaattcacaatcttctattctgtaccctgtgatgatggg
atcacagcattgtgccactgtttctgcctgatgaactgaaagtgaaagac
gtgtcacatgtgttcctcaagcctgctgttacagggtaggagagaaataa
actcatctccacttgtcatggattttctagctattttgatgccttgcttt
ctaaaacctggacacacacacacaagaaaaaaaaaagaaaatgttttgac
attgcacctcaaatgcatggcatttatctgcagttttgatataataaaaa
acattttagtttcagaggacacaatcatttgccatgacagagcctaagag
tattaggctctgaatatctcacactaccacgatcaatttaaaaataacag
gaattacaaatcatttggtcattaatatctctcaatatcaatggactcaa
tttcccaataaaaagacacaagctagcaaaatggacgtgaaaacaagatc
catcattctgctgcatataataagtaaatatactctgacatcaaagacag
acattacttcatagtaaagggctagaaaaagattttccaagcaaatggac
ccaagaagcaatctggtataggcagtctaattgctattgaaataaggaag
gtgggtgtgtttaaaacgtaaacagtcttcagatggctcccatttgactc
tctgtatgagttacataatatcatgaagaaactatccaggagtgaatatt
gtacaaattcccttcttagcagacaatgtttttaaaatcatctcacttct
tctgaacataaaatataccctagaaagaaccacgccacagctgtgctagc
acatgcatgtgaaatcatctggtaggcacaggaagtcttgagttttgtca
caatgtgtaaatttagtctagagggagactgtgggactgagtatgatgta
actgacttacattgttaaaaacattctagatctatgtgaacttacaacct
ctggggtgtggtagatgtgggaaaaagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12752193_12753342
seq2: B6Ng01-065I08.b_45_1174 (reverse)

seq1  CATTGAATGTAAACACAGCTGGCAATTGTCACAAAGATAAAGTTATACAC  50
      ||||| |||| ||||||| | |||| |||||||||||||||| || ||| 
seq2  CATTG-ATGT-AACACAG-TCGCAA-TGTCACAAAGATAAAG-TAAACAA  45

seq1  ACAAAAAGGTTTGGTGTTTTTAACGGCCTACTGTAAGAAAGAATAGCTCA  100
       |||||| | || ||||||   |||  ||||||| |||||||||||||||
seq2  CCAAAAAAGGTTTGTGTTT---ACG--CTACTGT-AGAAAGAATAGCTCA  89

seq1  CTGGTGCTCCAAGAGCTTGGAAAAGTTAATGAAGGATGGTCATGGGAGTG  150
      || ||||| ||||||||  |||||| ||||||| ||| ||||||||||||
seq2  CT-GTGCT-CAAGAGCT--GAAAAG-TAATGAA-GAT-GTCATGGGAGTG  132

seq1  GTAACATGAATATACCTTTGACCAAACCGTGAAAACTTTGTACTAAAATA  200
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  GTAACATG-ATATA-CTTTGACCAAACCGTGAAAACTTTGTACTAAAATA  180

seq1  TTGGTGTTTATAAGTTAACATTAACTGGAGAAAGGAGGAAAATAGTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTTATAAGTTAACATTAACTGGAGAAAGGAGGAAAATAGTATGT  230

seq1  GATAAAAAATACATTTAAATAACCCATCTTAGACCCAGTGAGACTTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAATACATTTAAATAACCCATCTTAGACCCAGTGAGACTTTGGT  280

seq1  TTTCCATTATGAAGGTGCAATGAAGACCTACAGGTGCCCCATGGGGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTATGAAGGTGCAATGAAGACCTACAGGTGCCCCATGGGGAAAA  330

seq1  GCCCCAGAGAGCTCATGGACTCCATCCATAGTGCCTGGCTAGCTCTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGAGAGCTCATGGACTCCATCCATAGTGCCTGGCTAGCTCTTATT  380

seq1  CATTGTCCTTTAAAGTCAATCGCTTTAGAAGACCATGATGGCAAGGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCCTTTAAAGTCAATCGCTTTAGAAGACCATGATGGCAAGGTGAC  430

seq1  CATGTTTGGCCATCACTAAGCCACCTGAATGTTAATATTTTCCCAAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGGCCATCACTAAGCCACCTGAATGTTAATATTTTCCCAAACAC  480

seq1  ACCGGTTTTCTTCTGAACTGGAGATTTTCTGAGAATCTTCAACCATGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGTTTTCTTCTGAACTGGAGATTTTCTGAGAATCTTCAACCATGGTT  530

seq1  GAAAAAAAAATACCCAAGGCTGTATTAATCAGCCTCATAGAAATGATCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAATACCCAAGGCTGTATTAATCAGCCTCATAGAAATGATCAG  580

seq1  TTAGCAAGATTTCCTGTGTACCTTCCTCCACTTATATTCTACAAATACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAGATTTCCTGTGTACCTTCCTCCACTTATATTCTACAAATACTG  630

seq1  CTCTGTGGAATATATGAGAGAGGCAACATTATAATCTTTCTTTTACAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGAATATATGAGAGAGGCAACATTATAATCTTTCTTTTACAGGC  680

seq1  AAGGAAGAAGTAAGATACCCTTCTAAGGACACAGAGAGAGTTCATAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAAGTAAGATACCCTTCTAAGGACACAGAGAGAGTTCATAGTAA  730

seq1  ATTCATGGATGGACATGTTTGAGTGTCTTTTTTCTGTGTTTTTGTTGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGGATGGACATGTTTGAGTGTCTTTTTTCTGTGTTTTTGTTGCTT  780

seq1  TAGAAAGCTCCTAACCTTTTGATTATTCCCTGTCAGAGAGACCCTCTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCTCCTAACCTTTTGATTATTCCCTGTCAGAGAGACCCTCTGAT  830

seq1  GATACCTGTGAGTTACTCCACAAAAGGAATTCTTATTGCCAACTCTGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTGTGAGTTACTCCACAAAAGGAATTCTTATTGCCAACTCTGTTC  880

seq1  ATAACTGACTGTCACTCTTGTTCAAAGAGCAAGGTAAGGTTCTGTATTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGACTGTCACTCTTGTTCAAAGAGCAAGGTAAGGTTCTGTATTTA  930

seq1  CCATCTGCTTTTAGTGAAAAGTAAATCTCACAGGATCATAGCATTAGTAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGCTTTTAGTGAAAAGTAAATCTCACAGGATCATAGCATTAGTAC  980

seq1  TGTGAGTCATTTGAGCACCGAGTATGGAGTCTTGAACCATTTTTTTTTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTCATTTGAGCACCGAGTATGGAGTCTTGAACCATTTTTTTTTTA  1030

seq1  AAATGCAGAGTTAATTCTGTCTTTAAAAATATTAAAAATTTGTCAATAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGAGTTAATTCTGTCTTTAAAAATATTAAAAATTTGTCAATAAA  1080

seq1  GAGCTGAATGATGTTTATAAAATTATCAGTGCCCTACTTTCTAAGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAATGATGTTTATAAAATTATCAGTGCCCTACTTTCTAAGAATTC  1130

seq1: chr19_12645454_12646540
seq2: B6Ng01-065I08.g_67_1146

seq1  GAATTCTTTAAAAAGGATGTTTTTTCCCTTTTTGAAGTATTATACAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAAAGGATGTTTTTTCCCTTTTTGAAGTATTATACAGTTC  50

seq1  ACTTTGGTCTCAAATTCACAATCTTCTATTCTGTACCCTGTGATGATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGTCTCAAATTCACAATCTTCTATTCTGTACCCTGTGATGATGGG  100

seq1  ATCACAGCATTGTGCCACTGTTTCTGCCTGATGAACTGAAAGTGAAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGCATTGTGCCACTGTTTCTGCCTGATGAACTGAAAGTGAAAGAC  150

seq1  GTGTCACATGTGTTCCTCAAGCCTGCTGTTACAGGGTAGGAGAGAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACATGTGTTCCTCAAGCCTGCTGTTACAGGGTAGGAGAGAAATAA  200

seq1  ACTCATCTCCACTTGTCATGGATTTTCTAGCTATTTTGATGCCTTGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCTCCACTTGTCATGGATTTTCTAGCTATTTTGATGCCTTGCTTT  250

seq1  CTAAAACCTGGACACACACACACAAGAAAAAAAAAAGAAAATGTTTTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCTGGACACACACACACAAGAAAAAAAAAAGAAAATGTTTTGAC  300

seq1  ATTGCACCTCAAATGCATGGCATTTATCTGCAGTTTTGATATAATAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCACCTCAAATGCATGGCATTTATCTGCAGTTTTGATATAATAAAAA  350

seq1  ACATTTTAGTTTCAGAGGACACAATCATTTGCCATGACAGAGCCTAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAGTTTCAGAGGACACAATCATTTGCCATGACAGAGCCTAAGAG  400

seq1  TATTAGGCTCTGAATATCTCACACTACCACGATCAATTTAAAAATAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGCTCTGAATATCTCACACTACCACGATCAATTTAAAAATAACAG  450

seq1  GAATTACAAATCATTTGGTCATTAATATCTCTCAATATCAATGGACTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACAAATCATTTGGTCATTAATATCTCTCAATATCAATGGACTCAA  500

seq1  TTTCCCAATAAAAAGACACAAGCTAGCAAAATGGACGTGAAAACAAGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAATAAAAAGACACAAGCTAGCAAAATGGACGTGAAAACAAGATC  550

seq1  CATCATTCTGCTGCATATAATAAGTAAATATACTCTGACATCAAAGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTCTGCTGCATATAATAAGTAAATATACTCTGACATCAAAGACAG  600

seq1  ACATTACTTCATAGTAAAGGGCTAGAAAAAGATTTTCCAAGCAAATGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACTTCATAGTAAAGGGCTAGAAAAAGATTTTCCAAGCAAATGGAC  650

seq1  CCAAGAAGCAATCTGGTATAGGCAGTCTAATTGCTATTGAAATAAGGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGCAATCTGGTATAGGCAGTCTAATTGCTATTGAAATAAGGAAG  700

seq1  GTGGGTGTGTTTAAAACGTAAACAGTCTTCAGATGGCTCCCATTTGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGTGTTTAAAACGTAAACAGTCTTCAGATGGCTCCCATTTGACTC  750

seq1  TCTGTATGAGTTACATAATATCATGAAGAAACTATCCAGGAGTGAATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATGAGTTACATAATATCATGAAGAAACTATCCAGGAGTGAATATT  800

seq1  GTACAAATTCCCTTCTTAGCAGACAATGTTTTTAAAATCATCTCACTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAATTCCCTTCTTAGCAGACAATGTTTTTAAAATCATCTCACTTCT  850

seq1  TCTGAACATAAAATATACCCTAGAAAGAACCACGCCACAGCTGTGCTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACATAAAATATACCCTAGAAAGAACCACGCCACAGCTGTGCTAGC  900

seq1  ACATGCATGTGAAAATCATCTGGTAGGCCACAGGAAGTCTTGAGTTTTGT  950
      ||||||||||| ||||||||||||||| ||||||||||||||||||||||
seq2  ACATGCATGTG-AAATCATCTGGTAGG-CACAGGAAGTCTTGAGTTTTGT  948

seq1  CACAAATGTGTAAAATCTAGTCTAGAGGGAGACTGTGGGACTGAGTAATG  1000
      ||| ||||||| |||| ||||||||||||||||||||||||||||| |||
seq2  CAC-AATGTGT-AAATTTAGTCTAGAGGGAGACTGTGGGACTGAGT-ATG  995

seq1  ATGTAAACTGACTTACATTGTTAAAAACCATTCTAGAATCTATGTGAAC-  1049
      |||| |||||||||||||||||||||| |||||||| |||||||||||| 
seq2  ATGT-AACTGACTTACATTGTTAAAAA-CATTCTAG-ATCTATGTGAACT  1042

seq1  TACAAACTCTGGGGTGTGGTAGATGTGGAAAAGAGCAT  1087
      ||||| |||||||||||||||||||||| ||| |||||
seq2  TACAACCTCTGGGGTGTGGTAGATGTGGGAAAAAGCAT  1080