BAC Information

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BAC

Clone NameB6Ng01-066D04
Chromosome19 (Build37)
Map Location 19,620,503 - 19,620,971
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383440, Ostf1, LOC666712, BC016495, LOC100042193, 2410127L17Rik, LOC100042184, D030056L22Rik, Trpm6, Rorb
Downstream geneLOC100042218, LOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066D04.bB6Ng01-066D04.g
ACCDH885440DH885441
length1,260463
definitionDH885440|Mus musculus domesticus DNA, BAC clone: B6Ng01-066D04, 5' end.DH885441|Mus musculus domesticus DNA, BAC clone: B6Ng01-066D04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatagtagcccttaattcgttatgtagggttgaggctctgtaac
ttacccttttaatttttgtcgtcattgttcaaatcttgtttaagaagtca
tgtagctgaggtttcatgagcagcgtctctgaaatttctaggaaacacaa
tcttacaacaaacttcctgttcctatagatcttacagtctctcctgcttt
atttctgtaatgattcccaagccttaggtacaggacttgtggtatagatg
tatcaattaggactgggttccacaactttttatatttatcacttactgct
ttccataatggtcttcttctgatacctagtgaggtttcattaatggagtt
ccaggagaactctacttaactgtgggtataaaaacattcaaaatacagtt
aaggattatgctgatccaataaagaagcagttgtagatatttttagaaaa
tctttgacttcactaaccctgggttgttggctaggttttcaatagcagca
tggtttcactcttgttgagtgaatcttaaattcaattagagaactattgg
ttacagctgcaaaatgtatgccactattgcacacttggagctatcatgtt
gtattaatactattatgatttgtatgcttaatattcagttaggactgttg
gttgcttcctacctttggaagcttgcatggtactttctggtaccataaaa
gcttgtcctcagagagaaagaattcaggacagattcttcttgtgttcttt
ttgtccagtgtctaaagttcatgtcatctttagcaatagaggctttactt
cctacctctttgagtgaatcaaggatagtagcactagcctataatgtttg
gggagttccttagacaaccctgatgaagaatttaaaagatggttcctcat
gcagatattaaagatatctaaagttctaaagaaagaagtactgacattca
caaagtctctttctttcctttggtgatgtcacaaagaggaagctgaatta
tcattttatttgagcattttctagatggtgacttcacgcagctctgcaga
taagtagcagctctgcatagtagagatctgagtcctcccaaaggttcctc
aagaaagaacattcagatcagaagaataagttctatgatgcaacatacta
accacaacacagagttttcttaaatcagtctctctatgctattaaactac
ttcgaacaaatttcttgattgaagaacattatggaacagtgcaataataa
tcgagatata
catgcctacatgaattacgtttgatcaatcccaccagttaatgcctctct
ttcaatttctccacatcctcttcatcactagttctcattgattccactta
gtgctggcagtattaatgtgactgcgggaccatccattggacaatgtgta
tgctattggtccatctactggactcttctattctcatatccatcaactga
caattgatctttagctgtgtgtaggacattgtggctactccctcttccat
gtaagaattttgtttgactttatctcatacacatattgtttttgttatca
caaatgttagttctttcatacaattacatggttgtatttagaaagcattg
attttcttagagtcatctaatatctctgtatcttacaatctttcaattct
cttttctgttttgatctttgacatgtagaagtgtgtgtgtgtgtgtgtgt
gtgtgtgagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_19620503_19620971
seq2: B6Ng01-066D04.g_69_537

seq1  GAATTCCATGCCTACATGAATTACGTTTGATCAATCCCACCAGTTAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCCTACATGAATTACGTTTGATCAATCCCACCAGTTAATGC  50

seq1  CTCTCTTTCAATTTCTCCACATCCTCTTCATCACTAGTTCTCATTGATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCAATTTCTCCACATCCTCTTCATCACTAGTTCTCATTGATTC  100

seq1  CACTTAGTGCTGGCAGTATTAATGTGACTGCGGGACCATCCATTGGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGTGCTGGCAGTATTAATGTGACTGCGGGACCATCCATTGGACAA  150

seq1  TGTGTATGCTATTGGTCCATCTACTGGACTCTTCTATTCTCATATCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGCTATTGGTCCATCTACTGGACTCTTCTATTCTCATATCCATC  200

seq1  AACTGACAATTGATCTTTAGCTGTGTGTAGGACATTGTGGCTACTCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACAATTGATCTTTAGCTGTGTGTAGGACATTGTGGCTACTCCCTC  250

seq1  TTCCATGTAAGAATTTTGTTTGACTTTATCTCATACACATATTGTTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTAAGAATTTTGTTTGACTTTATCTCATACACATATTGTTTTTG  300

seq1  TTATCACAAATGTTAGTTCTTTCATACAATTACATGGTTGTATTTAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACAAATGTTAGTTCTTTCATACAATTACATGGTTGTATTTAGAAA  350

seq1  GCATTGATTTTCTTAGAGTCATCTAATATCTCTGTATCTTACAATCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGATTTTCTTAGAGTCATCTAATATCTCTGTATCTTACAATCTTTC  400

seq1  AATTCTCTTTTCTGTTTTGATCTTTGACATGTAGAAGTGTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTTTTCTGTTTTGATCTTTGACATGTAGAAGTGTGTGTGTGTGT  450

seq1  GTGTGTGTGTGTGAGAGAG  469
      |||||||||||||||||||
seq2  GTGTGTGTGTGTGAGAGAG  469