BAC Information

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BAC

Clone NameB6Ng01-066K15
Chromosome19 (Build37)
Map Location 35,333,842 - 35,334,725
singlet/doubletsinglet
Overlap genenone
Upstream geneFas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12, LOC676714, Pank1, Mphosph1, LOC383464
Downstream geneLOC100042292, A830019P07Rik, Htr7, Rpp30, Ankrd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066K15.bB6Ng01-066K15.g
ACCDH885779DH885780
length982982
definitionDH885779|Mus musculus domesticus DNA, BAC clone: B6Ng01-066K15, 5' end.DH885780|Mus musculus domesticus DNA, BAC clone: B6Ng01-066K15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttcaaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctcagcatctaactagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattacgttgatggattttcgtatattgaacc
atccctgcatccctgggatgaaacctacttggttaggatggatgattgct
ttgatgtgttcttggattctgttagcaagaactttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttttttggtttaggtatcagagtaattgtgacttcatagaatgagttg
ggtagagtaccttctgtttctattttgtggaatactttgtgaagaactgg
aattaggtcttctttgaaggtctgatagaattctgcactaaacccatctg
gtcctgggctttttttggtcaggagactattaatgactgcttccttttct
ttaggggatataggactgtttagatcattaacctgatcttgatttagctt
tggtacctggtatctgtctagaaacttgtccatttcatccaggttttcca
gttttgttgagtacagccttttgtagaagaatctgatggtgttttggatt
tcttcaggatcttttgttatgtttcacttttcatttctgattttgttaat
taggatgttgtccctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccagctccttgattgcttgatcctttga
atagttcttgtttccacttggttgatttaacccctgagtttgattatttc
ctgccttctactcctcttgggtgaatttgcttccttttggttctagagat
tttagtgtgtgtcaagctgctaatgtggtgtcttccagttgtttttggga
gcactcaaagtatgagttttctcttaggatgc
gaattcccctttgcattcagagtgtaaataaattaagtcaaatctggaga
gaataaaataaaatgctttcctcaagttcagtgagatacattggttctta
gtttggatgctagttggaaaccattatcctttatgaaaaatagctgacaa
tgcttgtaacatatgttatcttcctgctcaggcaactcaagacataggtg
tttttattatcatacagatgaggaaggtttccctaagtttccccgtgctg
ctcagctggtaatacaacatgctttgaacctgtgtgaccttaaaagtttt
ctttccttttgagaatgttgtacatatctacttcccattctcatctccaa
ctcctccctatcccctacaacacgaaccttccaaatttcttttttttttc
tttctttttttctttctacttactagagacaagtccttcaaaaaagaatt
attgtactttccacagcaaatatgcctcctcagtttggactgtgactgta
ctggctagttttgtgtgtcaacttgacacaggctggagttatcacagaga
aaagagcttcaattgaggaaatgcctccatgagatccagctgtaaggcat
tttctcaattagtgatccagacgggagggctcattgtgggtggtaccaac
cctaggctgctggtcttgggttctataaaagagcaagctgagcaacccag
gggaagcaagccagtaagaaacattcctccatggcatctgcatcagctcc
tgtatcctgacctgcttgagttccagtcctgacttccttttggtgatgaa
cagcaatttggaagtgtaagctgaataaaccctttcttccccaacttgct
ttttggtcatgatgtttgtgcagaaatagaaaccctgattaagacaaggg
cctagaattatctattttcatctaggctggaattttggcttgtgtaaaat
taattattttatatagctgcaatcaataaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_35333842_35334725
seq2: B6Ng01-066K15.g_69_953

seq1  GAATTCCCCTTTGCATTCAGAGTGTAAATAAATTAAGTCAAATCTGGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTTTGCATTCAGAGTGTAAATAAATTAAGTCAAATCTGGAGA  50

seq1  GAATAAAATAAAATGCTTTCCTCAAGTTCAGTGAGATACATTGGTTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAATAAAATGCTTTCCTCAAGTTCAGTGAGATACATTGGTTCTTA  100

seq1  GTTTGGATGCTAGTTGGAAACCATTATCCTTTATGAAAAATAGCTGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGATGCTAGTTGGAAACCATTATCCTTTATGAAAAATAGCTGACAA  150

seq1  TGCTTGTAACATATGTTATCTTCCTGCTCAGGCAACTCAAGACATAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTAACATATGTTATCTTCCTGCTCAGGCAACTCAAGACATAGGTG  200

seq1  TTTTTATTATCATACAGATGAGGAAGGTTTCCCTAAGTTTCCCCGTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTATCATACAGATGAGGAAGGTTTCCCTAAGTTTCCCCGTGCTG  250

seq1  CTCAGCTGGTAATACAACATGCTTTGAACCTGTGTGACCTTAAAAGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGGTAATACAACATGCTTTGAACCTGTGTGACCTTAAAAGTTTT  300

seq1  CTTTCCTTTTGAGAATGTTGTACATATCTACTTCCCATTCTCATCTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTTGAGAATGTTGTACATATCTACTTCCCATTCTCATCTCCAA  350

seq1  CTCCTCCCTATCCCCTACAACACGAACCTTCCAAATTTCTTTTTTTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCTATCCCCTACAACACGAACCTTCCAAATTTCTTTTTTTTTTC  400

seq1  TTTCTTTTTTTCTTTCTACTTACTAGAGACAAGTCCTTCAAAAAAGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTCTTTCTACTTACTAGAGACAAGTCCTTCAAAAAAGAATT  450

seq1  ATTGTACTTTCCACAGCAAATATGCCTCCTCAGTTTGGACTGTGACTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTTTCCACAGCAAATATGCCTCCTCAGTTTGGACTGTGACTGTA  500

seq1  CTGGCTAGTTTTGTGTGTCAACTTGACACAGGCTGGAGTTATCACAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTAGTTTTGTGTGTCAACTTGACACAGGCTGGAGTTATCACAGAGA  550

seq1  AAAGAGCTTCAATTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCTTCAATTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGGCAT  600

seq1  TTTCTCAATTAGTGATCCAGACGGGAGGGCTCATTGTGGGTGGTACCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAATTAGTGATCCAGACGGGAGGGCTCATTGTGGGTGGTACCAAC  650

seq1  CCTAGGCTGCTGGTCTTGGGTTCTATAAAAGAGCAAGCTGAGCAACCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCTGCTGGTCTTGGGTTCTATAAAAGAGCAAGCTGAGCAACCCAG  700

seq1  GGGAAGCAAGCCAGTAAGAAACATTCCTCCATGGCATCTGCATCAGCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAAGCCAGTAAGAAACATTCCTCCATGGCATCTGCATCAGCTCC  750

seq1  TGTATCCTGACCTGCTTGAGTTCCAGTCCTGACTTCC-TTTGGTGATGAA  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGTATCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTTGGTGATGAA  800

seq1  CAGCAATTTGGAAGTGTAAGCTGAATAAACCCTTTCTTCCCCAACTTGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAATTTGGAAGTGTAAGCTGAATAAACCCTTTCTTCCCCAACTTGCT  850

seq1  TTTTGGTCATGATGTTTGTGCAGAAATAGAAACCC  884
      |||||||||||||||||||||||||||||||||||
seq2  TTTTGGTCATGATGTTTGTGCAGAAATAGAAACCC  885