BAC Information

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BAC

Clone NameB6Ng01-069F03
Chromosome19 (Build37)
Map Location 16,951,991 - 17,096,869
singlet/doubletdoublet
Overlap geneA230083H22Rik
Upstream genePsat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438, Gna14, LOC666665, Vps13a, Foxb2
Downstream geneGcnt1, Rfk, Pcsk5, Eef1a1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069F03.bB6Ng01-069F03.g
ACCDH887665DH887666
length1,033809
definitionDH887665|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F03, 5' end.DH887666|Mus musculus domesticus DNA, BAC clone: B6Ng01-069F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,095,832 - 17,096,869)(16,951,991 - 16,952,798)
sequence
gaattctgaaccctaatcgtctccgaatagagttggggagacagtactgt
gtcacaggatgccttagggaggagaataaactctgcctttaactatgtta
aaggaggagtccttgctccatttctcggctctcatgaacatcagcactct
ggtgtaaatacagatgtggtgtttaacaacattgcagctagctttcagct
ggtgagagttccagatgtacctgtccatatacacaaatgccctcctcgct
ccgagaaaatcacacagcgattccagaattatacttaactgcctgattaa
ttactggacccccatggaaattactgtcaagattaggacagtcattcgac
ccctgattctgcttgataaacatttacaacttaatatatttgacaaagcc
atttgtatactgctataacacaattgaaggtgtattaaagctatagtaag
tgtatgattttcatagtcttaaaataactcactaactacagacagttccc
tgagcaattacaagatgttctatgttaatttaggaaggaattccaaacaa
gtcatttaaaacctaataagatgccattaaatgaagggggacgggggagg
gggaagctaaagaaaaccctaaggcttgaaccagtagaaatgattctcag
agctactgacccttgcaagatccatgttttgctttggtttctggaaaaga
ggcagacttctaattgaaggtgattatctagttagtacatcccaaattgc
acacatttcttatatcggttcacacccacaactaattagatggtgcattt
tatcaatctggaagtccatggaaactgttttattgatctacacattgaaa
agatgccccgtcagctcagaagagctacgcactggtactgatgacagcca
gccaccctgacgtttatgcacatctatgagctgaactgtgagctgatcca
ctgggggtgaattcagagagagcacagaaaaaacgtgctgcttgctctgg
gttttttaatctggacaatatgattccaccctt
gaattcctatttattcggacatttgaagtgtggaaaccactggtgttagt
cctgtctggggtcttttcaggagttatcatggccactccacagggactcg
agcctgacccctaagactccttgccatattctcttcccaaccacgtgtcc
agagtggatgcaaagtgggggagaaactggccccagagcctgccggacac
agggctctcaagcaggatgatcctggaagagtcatcctctctttcacgtt
ttttcttttcttttcaggatataggtagaggtcagaagtacacctaaggt
ctaaggtcttgtgctctaaggggctgaggtttagagttgtgataccggag
ctaaagcctgaggaactgtgttctcctggctgttctaaggttcgcaatat
cccaggactcttctccaatctacctggtatcctccctcaagggcatcctt
ccttcaggattgtccacctaccgcctgggcagtagagtcaggctgggcag
gcatctgggcacaggtgctcgctcctgcccaatttggatttctgagatgc
ttgtttgcatttcctgaaactctgggacctctcactctcaccggagacag
tccacagagtttaggggaattatttctttggggggggcggataggcgggc
gggcgctggacttgtgtttaatagaaagccagctccgccacctactggct
gcgtgcgtgtctgaaacttccctgggcctcagtttcttcttctctaaaat
ggagactttttggtttatagagtgacagggaggagtgggattcttgatgt
gagcttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_17095832_17096869
seq2: B6Ng01-069F03.b_46_1078 (reverse)

seq1  AAGGCTGGAATACATATTGTCCATGATTTAGAAAACCCAGAGCAAGCCAG  50
      |||| |||||| ||||||||||| || ||| ||||||||||||||| |||
seq2  AAGGGTGGAAT-CATATTGTCCA-GA-TTAAAAAACCCAGAGCAAG-CAG  46

seq1  CACCTTTGTTCTGTGCCTCTCTCTGAATTCACCCCCAGTGGATCAGCCTC  100
      ||| ||| ||||||| |||||||||||||||||||||||||||||| |||
seq2  CACGTTTTTTCTGTG-CTCTCTCTGAATTCACCCCCAGTGGATCAG-CTC  94

seq1  ACAGTTCAGCTCATAGATGTGCATGAACGTCAGGGTGGCTGGCTGTCATC  150
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACAGTTCAGCTCATAGATGTGCATAAACGTCAGGGTGGCTGGCTGTCATC  144

seq1  AGTACCAGTGCGTAGCTCTTCTGAGCTGACGGGGCATCTTTTCAATGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAGTGCGTAGCTCTTCTGAGCTGACGGGGCATCTTTTCAATGTGT  194

seq1  AGATCAATAAAACAGTTTCCATGGACTTCCAGATTGAT-AAATGCACCAT  249
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGATCAATAAAACAGTTTCCATGGACTTCCAGATTGATAAAATGCACCAT  244

seq1  CTAATTAGTTGTGGGTGTGAACCGATATAAGAAATGTGTGCAATTTGGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAGTTGTGGGTGTGAACCGATATAAGAAATGTGTGCAATTTGGGA  294

seq1  TGTACTAACTAGATAATCACCTTCAATTAGAAGTCTGCCTCTTTTCCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTAACTAGATAATCACCTTCAATTAGAAGTCTGCCTCTTTTCCAGA  344

seq1  AACCAAAGCAAAACATGGATCTTGCAAGGGTCAGTAGCTCTGAGAATCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAGCAAAACATGGATCTTGCAAGGGTCAGTAGCTCTGAGAATCAT  394

seq1  TTCTACTGGTTCAAGCCTTAGGGTTTTCTTTAGCTTCCCCCTCCCCCGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGGTTCAAGCCTTAGGGTTTTCTTTAGCTTCCCCCTCCCCCGTC  444

seq1  CCCCTTCATTTAATGGCATCTTATTAGGTTTTAAATGACTTGTTTGGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCATTTAATGGCATCTTATTAGGTTTTAAATGACTTGTTTGGAAT  494

seq1  TCCTTCCTAAATTAACATAGAACATCTTGTAATTGCTCAGGGAACTGTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTAAATTAACATAGAACATCTTGTAATTGCTCAGGGAACTGTCT  544

seq1  GTAGTTAGTGAGTTATTTTAAGACTATGAAAATCATACACTTACTATAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTAGTGAGTTATTTTAAGACTATGAAAATCATACACTTACTATAGC  594

seq1  TTTAATACACCTTCAATTGTGTTATAGCAGTATACAAATGGCTTTGTCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACACCTTCAATTGTGTTATAGCAGTATACAAATGGCTTTGTCAA  644

seq1  ATATATTAAGTTGTAAATGTTTATCAAGCAGAATCAGGGGTCGAATGACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAAGTTGTAAATGTTTATCAAGCAGAATCAGGGGTCGAATGACT  694

seq1  GTCCTAATCTTGACAGTAATTTCCATGGGGGTCCAGTAATTAATCAGGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAATCTTGACAGTAATTTCCATGGGGGTCCAGTAATTAATCAGGCA  744

seq1  GTTAAGTATAATTCTGGAATCGCTGTGTGATTTTCTCGGAGCGAGGAGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTATAATTCTGGAATCGCTGTGTGATTTTCTCGGAGCGAGGAGGG  794

seq1  CATTTGTGTATATGGACAGGTACATCTGGAACTCTCACCAGCTGAAAGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGTATATGGACAGGTACATCTGGAACTCTCACCAGCTGAAAGCT  844

seq1  AGCTGCAATGTTGTTAAACACCACATCTGTATTTACACCAGAGTGCTGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAATGTTGTTAAACACCACATCTGTATTTACACCAGAGTGCTGAT  894

seq1  GTTCATGAGAGCCGAGAAATGGAGCAAGGACTCCTCCTTTAACATAGTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGAGAGCCGAGAAATGGAGCAAGGACTCCTCCTTTAACATAGTTA  944

seq1  AAGGCAGAGTTTATTCTCCTCCCTAAGGCATCCTGTGACACAGTACTGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGAGTTTATTCTCCTCCCTAAGGCATCCTGTGACACAGTACTGTC  994

seq1  TCCCCAACTCTATTCGGAGACGATTAGGGTTCAGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAACTCTATTCGGAGACGATTAGGGTTCAGAATTC  1033

seq1: chr19_16951991_16952798
seq2: B6Ng01-069F03.g_68_876

seq1  GAATTCCTATTTATTCGGACATTTGAAGTGTGGAAACCACTGGTGTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTTATTCGGACATTTGAAGTGTGGAAACCACTGGTGTTAGT  50

seq1  CCTGTCTGGGGTCTTTTCAGGAGTTATCATGGCCACTCCACAGGGACTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTGGGGTCTTTTCAGGAGTTATCATGGCCACTCCACAGGGACTCG  100

seq1  AGCCTGACCCCTAAGACTCCTTGCCATATTCTCTTCCCAACCACGTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGACCCCTAAGACTCCTTGCCATATTCTCTTCCCAACCACGTGTCC  150

seq1  AGAGTGGATGCAAAGTGGGGGAGAAACTGGCCCCAGAGCCTGCCGGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGATGCAAAGTGGGGGAGAAACTGGCCCCAGAGCCTGCCGGACAC  200

seq1  AGGGCTCTCAAGCAGGATGATCCTGGAAGAGTCATCCTCTCTTTCACGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCTCAAGCAGGATGATCCTGGAAGAGTCATCCTCTCTTTCACGTT  250

seq1  TTTTCTTTTCTTTTCAGGATATAGGTAGAGGTCAGAAGTACACCTAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCTTTTCAGGATATAGGTAGAGGTCAGAAGTACACCTAAGGT  300

seq1  CTAAGGTCTTGTGCTCTAAGGGGCTGAGGTTTAGAGTTGTGATACCGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTCTTGTGCTCTAAGGGGCTGAGGTTTAGAGTTGTGATACCGGAG  350

seq1  CTAAAGCCTGAGGAACTGTGTTCTCCTGGCTGTTCTAAGGTTCGCAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCCTGAGGAACTGTGTTCTCCTGGCTGTTCTAAGGTTCGCAATAT  400

seq1  CCCAGGACTCTTCTCCAATCTACCTGGTATCCTCCCTCAAGGGCATCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGACTCTTCTCCAATCTACCTGGTATCCTCCCTCAAGGGCATCCTT  450

seq1  CCTTCAGGATTGTCCACCTACCGCCTGGGCAGTAGAGTCAGGCTGGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGGATTGTCCACCTACCGCCTGGGCAGTAGAGTCAGGCTGGGCAG  500

seq1  GCATCTGGGCACAGGTGCTCGCTCCTGCCCAATTTGGATTTCTGAGATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGGGCACAGGTGCTCGCTCCTGCCCAATTTGGATTTCTGAGATGC  550

seq1  TTGTTTGCATTTCCTGAAACTCTGGGACCTCTCACTCTCACCGGAGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCATTTCCTGAAACTCTGGGACCTCTCACTCTCACCGGAGACAG  600

seq1  TCCACAGAGTTTAGGGGAATTATTTCTTTGGGGGGGGCGGATAGGCGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGAGTTTAGGGGAATTATTTCTTTGGGGGGGGCGGATAGGCGGGC  650

seq1  GGGCGCTGGACTTGTGTTTAATAGAAAGCCAGCTCCGCCACCTACTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGCTGGACTTGTGTTTAATAGAAAGCCAGCTCCGCCACCTACTGGCT  700

seq1  GCGTGCGTGTCTGTAACTT-CCTGGGCCTCAGTTTCTTCTTCTCTAAAAT  749
      ||||||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  GCGTGCGTGTCTGAAACTTCCCTGGGCCTCAGTTTCTTCTTCTCTAAAAT  750

seq1  GGAGACTTTTTGGTTTATAGAGTGACAGGGAGGAGTGGGATTCTTGAGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGAGACTTTTTGGTTTATAGAGTGACAGGGAGGAGTGGGATTCTTGATGT  800

seq1  GAGCTTGTT  808
      |||||||||
seq2  GAGCTTGTT  809