BAC Information

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BAC

Clone NameB6Ng01-070A02
Chromosome19 (Build37)
Map Location 15,952,314 - 15,953,395
singlet/doubletsinglet
Overlap genenone
Upstream geneEG433225, EG635497, Pomc-ps1, LOC667482
Downstream genePsat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438, Gna14, LOC666665, Vps13a, Foxb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070A02.bB6Ng01-070A02.g
ACCDH888142DH888143
length1,0811,211
definitionDH888142|Mus musculus domesticus DNA, BAC clone: B6Ng01-070A02, 5' end.DH888143|Mus musculus domesticus DNA, BAC clone: B6Ng01-070A02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacacccctaagccccttaccccataaaaacccctagcttccga
gcctcgtggccaacatccaacatctcctgtgtgggatgcatgtcggtcca
gagctccatcattaaactacctaatgtaattacagcaaggctttttcgtg
attctttgggtgcccaccgaatcgggaattgagtgggggtttccccacta
ggttctatcaatatataaccacagctacctccaaatactagaattaactg
agcaaagactcagatgacttgcaagttgaatatgccatgtcgtgaactta
agatagttaagccggttacataaagcagttgggattttctgaggcagagt
cttctgttcagcctaggttgatctgcagctctctgttgtccaggttggcc
tcaaactcataattccctcacctgcactgcaactacagtcgtgcacacaa
tgcctagcccgtgagggaagcaaaactggagcctcacactctctgatttc
caaacatatgacaaagctaaatagtcaccagagcttagacagaactcaga
caatacaaagctacaaatgtcaaaacagttcgtcgctggtctgaaaacag
acaggcccatgggacagaacagagatcccagaccaaaactgacacatgcc
accaagtggcctcaggtaaagagcagaaccttacaaaggggaagtgcatc
cagtaaaccctgctgtggaaactggcagaggaggagatctaataagcaaa
ccattctagagctaggtctgtgggcacacctgtaatcgcagcactcagaa
cccgtaaggaggatgactgctctggaggctagtctgcactacacagggag
atcctatttctcccacctccaactctggcaaaacaccaagggaatgtgct
ggataggaccagttctacaagctcagctctctagaaagctggagcagtca
aggtctccctgactccaagaagtcaacacttagccccagcctgtgcaaca
cagttagagcccatctgaaaaacactggcaacactctaactgaattgctg
aggagacctatcagtactaagaagggaagta
gaattctttggattgaagacaaagataaacttacccatgaggcagcagga
aggaatgacctatgctacaacagtacgtaagcaaatgaatattgaagaac
accaaaaataatagatattaatacatatttttgaataataactaagatta
atgaactaaaatgttcaaccaaaggcacagactatcaatttggagtcaaa
atactatccatgtgtctgttgctctaagaaatgtttgttactgtaataaa
caaacacaaccttagggtaaaaggatggaaaaacaaacggaactgggaaa
tgagtaagtcctaattgttcataaaaaatatttcaaagcagaatcagtaa
gaagagataaagaaggccagttcatactggtgaagggaggcaatcaaaaa
tacattacaattttaaatatgtgactacttagcttgatgcatatggtgtg
tacagtttcataaaacaaatgctactagatttagaaagacaagttaatcc
caacacaataatattgtgtgacttcaatactctatggtcacaaatagaga
tgtccccttgacaaaaacaaaacaaaacaaacaaaacaaaaatgaaaaat
agaaacatcagttaaatgatatcacaggtcagacatcaacaaaacatccc
atctgaacagaatggaatgcttgttttgctcggcagcttatggaaatttc
tcaaaaatacatcatgggataggacacaaaacaaatctgtttgtttgttt
gtttgtttgttggagacagagtctctctgtgtaacagaaccttagctgtc
ctggaaccccctttgtagaccaggctggtctccaacttagagatccacct
gcctctgcttccccagtgctgggaataaaggcgtgcgtgtgccactatgc
ccagttcacaaagcaatcttaacaaacacaggaagactgaaaccattcct
gtatctatctgaccacatggagtataccaaaatgtagaaagaaaactgca
gatatttaaaacaaacatatgatggtcactgagagatcagaaagaaaaat
ttaatcttaataaatgaaaaccacaacaacaaactttagatcatgaaata
atcttaggagtagtttagcttaatgtttaactagatactatgtagctaag
tacctgataccgggaatttcaataccagttagctctcttgaagcctgcaa
tggcacccagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15952314_15953395
seq2: B6Ng01-070A02.b_43_1123

seq1  GAATTCCACACCCCTAAGCCCCTTACCCCATAAAAACCCCTAGCTTCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCCTAAGCCCCTTACCCCATAAAAACCCCTAGCTTCCGA  50

seq1  GCCTCGTGGCCAACATCCAACATCTCCTGTGTGGGATGCATGTCGGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGTGGCCAACATCCAACATCTCCTGTGTGGGATGCATGTCGGTCCA  100

seq1  GAGCTCCATCATTAAACTACCTAATGTAATTACAGCAAGGCTTTTTCGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCATCATTAAACTACCTAATGTAATTACAGCAAGGCTTTTTCGTG  150

seq1  ATTCTTTGGGTGCCCACCGAATCGGGAATTGAGTGGGGGTTTCCCCACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGGGTGCCCACCGAATCGGGAATTGAGTGGGGGTTTCCCCACTA  200

seq1  GGTTCTATCAATATATAACCACAGCTACCTCCAAATACTAGAATTAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTATCAATATATAACCACAGCTACCTCCAAATACTAGAATTAACTG  250

seq1  AGCAAAGACTCAGATGACTTGCAAGTTGAATATGCCATGTCGTGAACTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGACTCAGATGACTTGCAAGTTGAATATGCCATGTCGTGAACTTA  300

seq1  AGATAGTTAAGCCGGTTACATAAAGCAGTTGGGATTTTCTGAGGCAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTTAAGCCGGTTACATAAAGCAGTTGGGATTTTCTGAGGCAGAGT  350

seq1  CTTCTGTTCAGCCTAGGTTGATCTGCAGCTCTCTGTTGTCCAGGTTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTCAGCCTAGGTTGATCTGCAGCTCTCTGTTGTCCAGGTTGGCC  400

seq1  TCAAACTCATAATTCCCTCACCTGCACTGCAACTACAGTCGTGCACACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTCATAATTCCCTCACCTGCACTGCAACTACAGTCGTGCACACAA  450

seq1  TGCCTAGCCCGTGAGGGAAGCAAAACTGGAGCCTCACACTCTCTGATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGCCCGTGAGGGAAGCAAAACTGGAGCCTCACACTCTCTGATTTC  500

seq1  CAAACATATGACAAAGCTAAATAGTCACCAGAGCTTAGACAGAACTCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATATGACAAAGCTAAATAGTCACCAGAGCTTAGACAGAACTCAGA  550

seq1  CAATACAAAGCTACAAATGTCAAAACAGTTCGTCGCTGGTCTGAAAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAAAGCTACAAATGTCAAAACAGTTCGTCGCTGGTCTGAAAACAG  600

seq1  ACAGGCCCATGGGACAGAACAGAGATCCCAGACCAAAACTGACACATGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCCATGGGACAGAACAGAGATCCCAGACCAAAACTGACACATGCC  650

seq1  ACCAAGTGGCCTCAGGTAAAGAGCAGAACCTTACAAAGGGGAAGTGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTGGCCTCAGGTAAAGAGCAGAACCTTACAAAGGGGAAGTGCATC  700

seq1  CAGTAAACCCTGCTGTGGAAACTGGCAGAGGAGGAGATCTAATAAGCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAACCCTGCTGTGGAAACTGGCAGAGGAGGAGATCTAATAAGCAAA  750

seq1  CCATTCTAGAGCTAGGTCTGTGGGCACACCTGTAATCGCAGCACTCAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTAGAGCTAGGTCTGTGGGCACACCTGTAATCGCAGCACTCAGAA  800

seq1  CCCGTAAGGAGGATGACTGCTCTGGAGGCTAGTCTGCACTACACAGGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTAAGGAGGATGACTGCTCTGGAGGCTAGTCTGCACTACACAGGGAG  850

seq1  ATCCTA-TTCTCCCACCTCCAACTCTGGCAAAACACCAAGGGAATGTGCT  899
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATTTCTCCCACCTCCAACTCTGGCAAAACACCAAGGGAATGTGCT  900

seq1  GGATAGGACCAGTACTACAGGCTCAGCTCCCTAGAAAGCT-GAGCAGTCA  948
      ||||||||||||| ||||| ||||||||| |||||||||| |||||||||
seq2  GGATAGGACCAGTTCTACAAGCTCAGCTCTCTAGAAAGCTGGAGCAGTCA  950

seq1  GGGTC-CCCTGACCCCAAGAGTTCAACACTTAGCCCCAGCCTGTGCAACA  997
       |||| ||||||| ||||||  ||||||||||||||||||||||||||||
seq2  AGGTCTCCCTGACTCCAAGAAGTCAACACTTAGCCCCAGCCTGTGCAACA  1000

seq1  TAGTAAGAGCCCATCTGAAAAACACTGGCAAACAACTCTAACAGACATTC  1047
       ||| ||||||||||||||||||||||||||   |||||||| || ||| 
seq2  CAGTTAGAGCCCATCTGAAAAACACTGGCAA--CACTCTAACTGA-ATTG  1047

seq1  CAGAGAAGACATACCAGTAACAAAGAAGGGAAGTA  1082
      | ||| |||| || |||| || |||||||||||||
seq2  CTGAGGAGACCTATCAGT-ACTAAGAAGGGAAGTA  1081