BAC Information

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BAC

Clone NameB6Ng01-072F15
Chromosome19 (Build37)
Map Location 31,189,644 - 31,401,203
singlet/doubletdoublet
Overlap genePrkg1, 8430431K14Rik
Upstream geneGldc, EG625917, Mbl2, LOC100042088, LOC668020, EG546723, Dkk1, LOC625995, Cstf2t
Downstream gene1810073H04Rik, Asah2, EG668042, Sgms1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072F15.bB6Ng01-072F15.g
ACCDH889792DH889793
length1,1441,143
definitionDH889792|Mus musculus domesticus DNA, BAC clone: B6Ng01-072F15, 5' end.DH889793|Mus musculus domesticus DNA, BAC clone: B6Ng01-072F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,400,040 - 31,401,203)(31,189,644 - 31,190,815)
sequence
gaattctctctagggaaatttgcagattaatcgaaagcactgagaaccac
ctggagccaacaactaattgacagtttttcaaaaaaaaaatctaatctaa
tggtctatttcaaatatgaactctgacatgtcttagatagaaaatatagt
ttccggtcaattcaaaattatataaaactttttgctttttaaagcataca
tcacgactttcacaatgaggtaggagatgtaggtactgaaagatgaaaat
caaagcttccctgcagaagccaggtcataaccagtctctgtgcagtaagt
gtgaatactgcattcagcctcaggtttggacagtccttcccaccatgcta
actttcagttttgttgagatgaagtaaaaggcacagagttacctcgccat
gtgtgtttatagctacactattcacaaaggcaaaaaaaaaaaaaaatcag
ataaccctcaatagatagatagccaaagaaattgaggcatatatacacaa
tgaaactttgttcagctataaatacgagtgacattatgacattttcagat
gatggatgaaatcagagatcattatgtaaagcaaaataatccagatgaaa
aaaaaatcatcacctttactctcagatgcaaaaatctaggtctaaatgtg
tatatattgtattattgtgtgacttaatgtgtaaactgttttgctataca
taacatgtttttaaaaataaatatgcctatctatgggacatgaaaataca
aaggaaactatgagagcagaggaagaaaactaaagagaataagaagaaaa
aaacaaatgaagataccaaaatatatgtgacatcaaagcaggaggaattg
tttgtgtgagtgaggttaagtcaggagggagggaactgtgcatgataaaa
agcataacacatacacacaagcaaatgcacatgcatacacacacacacac
actctctctctctctctctctctctctctctctctctcacatagacatac
ataacatataacaatacagaagagttctttataatcacccaaatttttca
aatagtgaatgggaaagtactggtcatcagatgcgctactgcatctggag
tcatcctaccctataagcgtgcctgtctgtttccaatcccttcg
gaattccaaacagtcaatgtttaggaaaagacagatgatgctggagttct
gaaggatttagtgaacagaaaggtagtatttggagatgtataacaaagac
aaatgaatcttaataaaaaatgatagcatggcaaataatataaacaacat
atggagaagtctaggtgagtgtggtccgagtactggggtgcttctgtgat
gctcacttggtgggatgagtgtttagttccttctggaacccgtagttcat
tttgagctctaagcatatggtttatacagggatgagacgccatcctatca
tttttttcaatgaaagatgttccatccaatactgaaccatccttatttca
caccttacaatcaacaacagaaacggaaatctctgagccagcctgagtag
cgcaggatctattctgacagaatagtatatataaaatgctttcctattat
tctatttggtatcatctttaaaaagcaatcataacctagataatatattt
gaaaagcagaagagattgtttcacagaggctcacaagagaagtgtgctta
tgaaatgtgtcaacaggcttgtgcaaagcacatcggtgtgttgcttctcc
tgttatactgacataatagtaattatgcttgatagtttagttatcagata
tttttgttgataatatgaatgctgcttcagaagacctcttgtgaactaca
tttaacaatagctttagtaatccagcccaggagccatgaactgtgcctga
tcacccctatctactatgtgggtggatttaggatatgaaggatcgcccca
gcacagcactgaaagtggcagatatttcatgtcaagggtaaggagtgctc
acagcccattatttcactgcagtgcttcttagaggagaataaatagatgc
atccacaatgccattattaacgtcaagctaaagactaaggaccatgtcgc
tgaccactttgagtagctcttctctggtgctttttcaaacactaataatc
tctaaatggaatcgttccatttcatcccactgggtattgttgttctcctg
ggagttatttgcatctttggggccaaacaaagcaaacaaccaagtcagcc
ttccttcagagctggggttgggtgattattaatccttatggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_31400040_31401203
seq2: B6Ng01-072F15.b_47_1190 (reverse)

seq1  CGAAGGGGATTTGAGAAACAGACAAGCACAGCTTTATTAGTGTAGTGATG  50
      |||| ||||||   |||||||||| |||| ||||   ||| |||| ||||
seq2  CGAA-GGGATT--GGAAACAGACAGGCAC-GCTT--ATAGGGTAG-GATG  43

seq1  AAACTCAGATGCAGTAAGGCGCAAATCTGATGACAAGTACTTTCCCATTC  100
      |  | |||||||||||  ||||  |||||||||| |||||||||||||||
seq2  ACTC-CAGATGCAGTA--GCGC--ATCTGATGACCAGTACTTTCCCATTC  88

seq1  ACTATTTGAAAAATTTGGGTGATTATGTAAAGAAGTGTGTGTGTGTGTGT  150
      |||||||||||||||||||||||||  ||||||| | | | ||| | |||
seq2  ACTATTTGAAAAATTTGGGTGATTA--TAAAGAACTCT-TCTGTAT-TGT  134

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGA  200
       | | ||| | ||| ||| | |||||||||||||||||||||||||||||
seq2  -TATATGT-TATGTATGTCTATGTGAGAGAGAGAGAGAGAGAGAGAGAGA  182

seq1  GAGAGAGAGAGTGTGTGTGTGTGTGTATGCATGTGCATTTGCTTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGTGTGTGTGTGTGTGTATGCATGTGCATTTGCTTGTGTGT  232

seq1  ATGTGTTTATGCTTTTTATCATGCACAGTTCCCTCCCTCCCTGACTTAAC  300
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGTG-TTATGCTTTTTATCATGCACAGTTCCCTCCCT-CCTGACTTAAC  280

seq1  CTCACTCACACAAACAATTCCTCCTGCTTTGATGTCACATATATTTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCACACAAACAATTCCTCCTGCTTTGATGTCACATATATTTTGGT  330

seq1  ATCTTCATTTGTTTTTTTCTTCTTATTCTCTTTAGTTTTCTTCCTCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATTTGTTTTTTTCTTCTTATTCTCTTTAGTTTTCTTCCTCTGCT  380

seq1  CTCATAGTTTCCTTTGTATTTTCATGTCCCATAGATAGGCATATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGTTTCCTTTGTATTTTCATGTCCCATAGATAGGCATATTTATTT  430

seq1  TTAAAAACATGTTATGTATAGCAAAACAGTTTACACATTAAGTCACACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACATGTTATGTATAGCAAAACAGTTTACACATTAAGTCACACAA  480

seq1  TAATACAATATATACACATTTAGACCTAGATTTTTGCATCTGAGAGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAATATATACACATTTAGACCTAGATTTTTGCATCTGAGAGTAAA  530

seq1  GGTGATGATTTTTTTTTCATCTGGATTATTTTGCTTTACATAATGATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGATTTTTTTTTCATCTGGATTATTTTGCTTTACATAATGATCTC  580

seq1  TGATTTCATCCATCATCTGAAAATGTCATAATGTCACTCGTATTTATAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATCCATCATCTGAAAATGTCATAATGTCACTCGTATTTATAGC  630

seq1  TGAACAAAGTTTCATTGTGTATATATGCCTCAATTTCTTTGGCTATCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAAGTTTCATTGTGTATATATGCCTCAATTTCTTTGGCTATCTAT  680

seq1  CTATTGAGGGTTATCTGATTTTTTTTTTTTTTTGCCTTTGTGAATAGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAGGGTTATCTGATTTTTTTTTTTTTTTGCCTTTGTGAATAGTGT  730

seq1  AGCTATAAACACACATGGCGAGGTAACTCTGTGCCTTTTACTTCATCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATAAACACACATGGCGAGGTAACTCTGTGCCTTTTACTTCATCTCA  780

seq1  ACAAAACTGAAAGTTAGCATGGTGGGAAGGACTGTCCAAACCTGAGGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTGAAAGTTAGCATGGTGGGAAGGACTGTCCAAACCTGAGGCTG  830

seq1  AATGCAGTATTCACACTTACTGCACAGAGACTGGTTATGACCTGGCTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGTATTCACACTTACTGCACAGAGACTGGTTATGACCTGGCTTCT  880

seq1  GCAGGGAAGCTTTGATTTTCATCTTTCAGTACCTACATCTCCTACCTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAAGCTTTGATTTTCATCTTTCAGTACCTACATCTCCTACCTCAT  930

seq1  TGTGAAAGTCGTGATGTATGCTTTAAAAAGCAAAAAGTTTTATATAATTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGTCGTGATGTATGCTTTAAAAAGCAAAAAGTTTTATATAATTT  980

seq1  TGAATTGACCGGAAACTATATTTTCTATCTAAGACATGTCAGAGTTCATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGACCGGAAACTATATTTTCTATCTAAGACATGTCAGAGTTCATA  1030

seq1  TTTGAAATAGACCATTAGATTAGATTTTTTTTTTGAAAAACTGTCAATTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATAGACCATTAGATTAGATTTTTTTTTTGAAAAACTGTCAATTA  1080

seq1  GTTGTTGGCTCCAGGTGGTTCTCAGTGCTTTCGATTAATCTGCAAATTTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGGCTCCAGGTGGTTCTCAGTGCTTTCGATTAATCTGCAAATTTC  1130

seq1  CCTAGAGAGAATTC  1164
      ||||||||||||||
seq2  CCTAGAGAGAATTC  1144

seq1: chr19_31189644_31190815
seq2: B6Ng01-072F15.g_66_1208

seq1  GAATTCCAAACAGTCAATGTTTAGGAAAAGACAGATGATGCTGGAGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACAGTCAATGTTTAGGAAAAGACAGATGATGCTGGAGTTCT  50

seq1  GAAGGATTTAGTGAACAGAAAGGTAGTATTTGGAGATGTATAACAAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATTTAGTGAACAGAAAGGTAGTATTTGGAGATGTATAACAAAGAC  100

seq1  AAATGAATCTTAATAAAAAATGATAGCATGGCAAATAATATAAACAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATCTTAATAAAAAATGATAGCATGGCAAATAATATAAACAACAT  150

seq1  ATGGAGAAGTCTAGGTGAGTGTGGTCCGAGTACTGGGGTGCTTCTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAAGTCTAGGTGAGTGTGGTCCGAGTACTGGGGTGCTTCTGTGAT  200

seq1  GCTCACTTGGTGGGATGAGTGTTTAGTTCCTTCTGGAACCCGTAGTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTTGGTGGGATGAGTGTTTAGTTCCTTCTGGAACCCGTAGTTCAT  250

seq1  TTTGAGCTCTAAGCATATGGTTTATACAGGGATGAGACGCCATCCTATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTCTAAGCATATGGTTTATACAGGGATGAGACGCCATCCTATCA  300

seq1  TTTTTTTCAATGAAAGATGTTCCATCCAATACTGAACCATCCTTATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCAATGAAAGATGTTCCATCCAATACTGAACCATCCTTATTTCA  350

seq1  CACCTTACAATCAACAACAGAAACGGAAATCTCTGAGCCAGCCTGAGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTACAATCAACAACAGAAACGGAAATCTCTGAGCCAGCCTGAGTAG  400

seq1  CGCAGGATCTATTCTGACAGAATAGTATATATAAAATGCTTTCCTATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGATCTATTCTGACAGAATAGTATATATAAAATGCTTTCCTATTAT  450

seq1  TCTATTTGGTATCATCTTTAAAAAGCAATCATAACCTAGATAATATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTGGTATCATCTTTAAAAAGCAATCATAACCTAGATAATATATTT  500

seq1  GAAAAGCAGAAGAGATTGTTTCACAGAGGCTCACAAGAGAAGTGTGCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGAAGAGATTGTTTCACAGAGGCTCACAAGAGAAGTGTGCTTA  550

seq1  TGAAATGTGTCAACAGGCTTGTGCAAAGCACATCGGTGTGTTGCTTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTGTCAACAGGCTTGTGCAAAGCACATCGGTGTGTTGCTTCTCC  600

seq1  TGTTATACTGACATAATAGTAATTATGCTTGATAGTTTAGTTATCAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATACTGACATAATAGTAATTATGCTTGATAGTTTAGTTATCAGATA  650

seq1  TTTTTGTTGATAATATGAATGCTGCTTCAGAAGACCTCTTGTGAACTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTGATAATATGAATGCTGCTTCAGAAGACCTCTTGTGAACTACA  700

seq1  TTTAACAATAGCTTTAGTAATCCAGCCCAGGAGCCATGAACTGTGCCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAATAGCTTTAGTAATCCAGCCCAGGAGCCATGAACTGTGCCTGA  750

seq1  TCACCCCTATCTACTATGTGGGTGGATTTAGGATATGAAGGATCGCCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCTATCTACTATGTGGGTGGATTTAGGATATGAAGGATCGCCCCA  800

seq1  GCACAGCACTGAAAGTGGCAGATATTTCATGTCAAGGGTAAGGAGTGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCACTGAAAGTGGCAGATATTTCATGTCAAGGGTAAGGAGTGCTC  850

seq1  ACAGCCCATTATTTCACTGCAGTGCTTCTTAGAGGAGAATAAATAGATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCATTATTTCACTGCAGTGCTTCTTAGAGGAGAATAAATAGATGC  900

seq1  ATCCACAATGCCATTATTAACGTCAAGCTAAAAGACTAAGGACCATGTCG  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATCCACAATGCCATTATTAACGTCAAGCT-AAAGACTAAGGACCATGTCG  949

seq1  CTGACCAACTTTGAGTAGCCTCTCTCTGGTGCTTTTTCAAAACACTAAAT  1000
      |||||| ||||||||||||   |||||||||||||||| ||||||| |||
seq2  CTGACC-ACTTTGAGTAGCTCTTCTCTGGTGCTTTTTC-AAACACT-AAT  996

seq1  AATCTCTAAATGGAATCGTTCCATTTCATTCCCAACTGGTTATTGTTTGT  1050
      |||||||||||||||||||||||||||||  || ||||| ||||| ||||
seq2  AATCTCTAAATGGAATCGTTCCATTTCAT--CCCACTGGGTATTG-TTGT  1043

seq1  TCTTCCTGTGAGTTTATTTGCATTCTTTTTGGTGTCACAAAAACAAAGCA  1100
      || ||||| ||| |||||||||   | ||||| | |    ||||||||||
seq2  TC-TCCTGGGAG-TTATTTGCA---TCTTTGGGGCC----AAACAAAGCA  1084

seq1  AAACAAAACAAAGTCAAGCTGTCACTTCACAGAGCTGGGGTTGTGTAGAT  1150
      |   | ||| ||||| |||  || |||  |||||||||||||| || |||
seq2  A---ACAACCAAGTC-AGCCTTC-CTT--CAGAGCTGGGGTTGGGT-GAT  1126

seq1  CTAATTCTAATCCTTATTGGCA  1172
          |  ||||||||| |||||
seq2  ----TATTAATCCTTA-TGGCA  1143