BAC Information

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BAC

Clone NameB6Ng01-072L16
Chromosome19 (Build37)
Map Location 31,960,756 - 32,086,640
singlet/doubletdoublet
Overlap gene1810073H04Rik, Asah2
Upstream genePrkg1, LOC625995, Cstf2t, 8430431K14Rik
Downstream geneEG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072L16.bB6Ng01-072L16.g
ACCDH890062DH890063
length1,1361,139
definitionDH890062|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L16, 5' end.DH890063|Mus musculus domesticus DNA, BAC clone: B6Ng01-072L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,960,756 - 31,961,890)(32,085,498 - 32,086,640)
sequence
gaattcacatctctctgcctgatcataaggcctgcagccgtccagttgat
tcttctctcctgtcacctctcactcttcgtgtccagtctatagaactttg
attagtaattctatttttgtctctggtccctattggtcaactgtgatcat
ttcctagtttcttctcttgagtagttatgtgcagtggtttctgttttcag
taaatttttttcagattagggtttttgacccaattttataatgaaaattc
tacttcaccaagtattcacattgtaacaaaatctgaatctttatattgta
aattttagaagccatatatcataagataaaaaaatatattcatttttcta
ccacccagtttagccagttagccttttataatcaacaaccttatgaatat
aaatttaacataaatgaaatttgaccacacactctttttacaacttatct
tccaattattttcccaaaaagtctaccgcacttgtgactcctttgactgg
catatcaaccggtattatattactgttcatgccaatatctccttgtcact
aattacttgggcaatgtctaagctttctttcaaactctgtgagagttgaa
aaaagaaaaaaaaaacagtattcagggagttaaaatcatggaagaagaac
agaagttgaaatgtcgttgtgttctcaaccaatataaaatttactactga
ggttttttttttaattataaatacaattgatagtcactaaaacaacttta
atttctttatttcaagatgatctggacccaaattaatgcatcatacatta
acagatgccttaacaacagaaaggttgttctgattaattaattgactgat
atatattttgaagtaataaagtgatacattaagactttttaaaatgcttt
ttagttttttaagttaaaatataattgcatcatttccctccttctctttc
ctcccttcaacccttgtcagtatcaccccttcatttcctctccaaatgga
tggtgtcctattttttttaatccatgtaatcgcccataagacctttggaa
tgtggggatatgcatattcctttttctatctttcatgatgcaaactcaaa
tgactatgatttccattgtaacatttttctaagtcc
gaattctctgctgatctcttggtagcctcctgtactatgtttggcaacac
tgacaaataatgtttccttatttggtggaacctctgtagaagaaatctgc
ctatgcttgtgacctgtaaaagagatgagggaaaacatgaaaagttcaca
agcctggcattccaaaggaaaaggggtccagtggattaaggaagtatgca
gacttgaaatgatattaaaacacttaagcatcagtttagatagtaaaaag
acagaagaatattttacgcctgtatcttttacagtctttcctatccccac
aagggaaatttgttgaactagcccttgaatatttttcttctttcaagaat
tcatcaaattcttacattctgcccaacacatcctatcattcccatcactg
ccatcattcacacagattatttcactacctttcaatttgggttcctccat
ggctcctctgtagtcctttttcaacaggacacccaactccattcctttac
agtggtggctctcagccttcctaatgctgtgaccctttaacctaggtcct
catgttgtgatctttcctactttattactgtgattttgctacttttatga
atcacaatttaaatattgccaaaatttgaatatgtgccaaaggggttgtg
acccacgcgttgagaacctctgcttcaaaccatgaactaaacatgctact
tctctgtcccagatcacccagccctttcccatcttcttccaggcactcac
ccacttccttccactttctttacaggtccacgcagactgtatctcagcaa
gttccctgctgtgatttcttttggctttccttctttttcaccctgcttca
gccatcctgcatcactgttaaggttttcttgtatagagagaaatgtacct
gctaagaacatgcaccactaagcatgttctagacttggagattttgaact
tatggttctttctgtagaaaccacattctctcagctagcctcaaggccaa
gtctttgattttttaatcctttgcttaaatctcctaatgagatgctaata
actaatcatactacataaaagcatcgttactacagcaaccagcctgtctc
tctgccaatcagaccagcaccaggatcgcaccaacacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_31960756_31961890
seq2: B6Ng01-072L16.b_47_1182

seq1  GAATTCACATCTCTCTGCCTGATCATAAGGCCTGCAGCCGTCCAGTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCTCTCTGCCTGATCATAAGGCCTGCAGCCGTCCAGTTGAT  50

seq1  TCTTCTCTCCTGTCACCTCTCACTCTTCGTGTCCAGTCTATAGAACTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTCCTGTCACCTCTCACTCTTCGTGTCCAGTCTATAGAACTTTG  100

seq1  ATTAGTAATTCTATTTTTGTCTCTGGTCCCTATTGGTCAACTGTGATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAATTCTATTTTTGTCTCTGGTCCCTATTGGTCAACTGTGATCAT  150

seq1  TTCCTAGTTTCTTCTCTTGAGTAGTTATGTGCAGTGGTTTCTGTTTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTTTCTTCTCTTGAGTAGTTATGTGCAGTGGTTTCTGTTTTCAG  200

seq1  TAAATTTTTTTCAGATTAGGGTTTTTGACCCAATTTTATAATGAAAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTTTCAGATTAGGGTTTTTGACCCAATTTTATAATGAAAATTC  250

seq1  TACTTCACCAAGTATTCACATTGTAACAAAATCTGAATCTTTATATTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCACCAAGTATTCACATTGTAACAAAATCTGAATCTTTATATTGTA  300

seq1  AATTTTAGAAGCCATATATCATAAGATAAAAAAATATATTCATTTTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAGAAGCCATATATCATAAGATAAAAAAATATATTCATTTTTCTA  350

seq1  CCACCCAGTTTAGCCAGTTAGCCTTTTATAATCAACAACCTTATGAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCAGTTTAGCCAGTTAGCCTTTTATAATCAACAACCTTATGAATAT  400

seq1  AAATTTAACATAAATGAAATTTGACCACACACTCTTTTTACAACTTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAACATAAATGAAATTTGACCACACACTCTTTTTACAACTTATCT  450

seq1  TCCAATTATTTTCCCAAAAAGTCTACCGCACTTGTGACTCCTTTGACTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTATTTTCCCAAAAAGTCTACCGCACTTGTGACTCCTTTGACTGG  500

seq1  CATATCAACCGGTATTATATTACTGTTCATGCCAATATCTCCTTGTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAACCGGTATTATATTACTGTTCATGCCAATATCTCCTTGTCACT  550

seq1  AATTACTTGGGCAATGTCTAAGCTTTCTTTCAAACTCTGTGAGAGTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTGGGCAATGTCTAAGCTTTCTTTCAAACTCTGTGAGAGTTGAA  600

seq1  AAAAGAAAAAAAAAACAGTATTCAGGGAGTTAAAATCATGGAAGAAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAAAAAACAGTATTCAGGGAGTTAAAATCATGGAAGAAGAAC  650

seq1  AGAAGTTGAAATGTCGTTGTGTTCTCAACCAATATAAAATTTACTACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTGAAATGTCGTTGTGTTCTCAACCAATATAAAATTTACTACTGA  700

seq1  GGTTTTTTTTTTAATTATAAATACAATTGATAGTCACTAAAACAACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTAATTATAAATACAATTGATAGTCACTAAAACAACTTTA  750

seq1  ATTTCTTTATTTCAAGATGATCTGGACCCAAATTAATGCATCATACATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTATTTCAAGATGATCTGGACCCAAATTAATGCATCATACATTA  800

seq1  ACAGATGCCTTAACAACAGAAAGGTTGTTCTGATTAATTAATTGACTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGCCTTAACAACAGAAAGGTTGTTCTGATTAATTAATTGACTGAT  850

seq1  ATATATTTTGAAGTAATAAGGTGATACATTAAGACTTTTTAAAATGCTTT  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATATATTTTGAAGTAATAAAGTGATACATTAAGACTTTTTAAAATGCTTT  900

seq1  TTAGTTTTTTAAGTTAAAATATAATTGCATCATTTCCCTCCTTCTCTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTTTAAGTTAAAATATAATTGCATCATTTCCCTCCTTCTCTTTC  950

seq1  CTCCCTTCAACCCTTGCCAGTATCA-CCCTTCATTTCCTCTCCAAATGCA  999
      |||||||||||||||| |||||||| |||||||||||||||||||||| |
seq2  CTCCCTTCAACCCTTGTCAGTATCACCCCTTCATTTCCTCTCCAAATGGA  1000

seq1  TGGTGT-CTA-TTTTTTTAATCCATGTAATCGCCACAT-AGACCTTTGGA  1046
      |||||| ||| ||||||||||||||||||||||| ||| |||||||||||
seq2  TGGTGTCCTATTTTTTTTAATCCATGTAATCGCC-CATAAGACCTTTGGA  1049

seq1  ATGTGTGGATATGCATATT-CTTTTTCTATCTTTCATGATGCAAACTCAA  1095
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGTGGGGATATGCATATTCCTTTTTCTATCTTTCATGATGCAAACTCAA  1099

seq1  ATGAACTATTGATTTCATTTGTAAACATTTTTCTAAGTCC  1135
      ||| |||| |||||||  |||| |||||||||||||||||
seq2  ATG-ACTA-TGATTTCCATTGT-AACATTTTTCTAAGTCC  1136

seq1: chr19_32085498_32086640
seq2: B6Ng01-072L16.g_68_1206 (reverse)

seq1  TAGTGTTGGTGCCGATACTGGTGCTGGTGCTGATGTGC-GAGAGACA-GC  48
      ||||||||||| |||| ||||||||||| |||||  || |||||||| ||
seq2  TAGTGTTGGTG-CGATCCTGGTGCTGGT-CTGATTGGCAGAGAGACAGGC  48

seq1  TGGTTGCTGTTAGTAACGATGCTTTTATGTAGTATGAATAG-TATTAGCA  97
      ||||||||| ||||||||||||||||||||||||||| ||| ||||||||
seq2  TGGTTGCTG-TAGTAACGATGCTTTTATGTAGTATGATTAGTTATTAGCA  97

seq1  TCTCCATTA-GAGATTTAAGCAAAGGATTTAAAAAAATTCAAAGACTTGG  146
      ||| ||||| |||||||||||||||||||   ||||| ||||||||||||
seq2  TCT-CATTAGGAGATTTAAGCAAAGGATT---AAAAAATCAAAGACTTGG  143

seq1  CCTTGAGGCTAGCTGAAGAGAATGTGTTTTCTACAGAAAGAACCATAAGT  196
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  CCTTGAGGCTAGCTG-AGAGAATGTGGTTTCTACAGAAAGAACCATAAGT  192

seq1  TCAAAATCTCCAAGTCTAGAACATGCTTAGTGGTGCATGTTCTTAGCAGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCTCCAAGTCTAGAACATGCTTAGTGGTGCATGTTCTTAGCAGG  242

seq1  TACATTTCTCTCTATACAAGAAAACCTTAACAGTGATGCAGGATGGCTGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCTCTCTATACAAGAAAACCTTAACAGTGATGCAGGATGGCTGA  292

seq1  AGCAGGGTGAAAAAGAAGGAAAGCCAAAAGAAATCACAGCAGGGAACTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGTGAAAAAGAAGGAAAGCCAAAAGAAATCACAGCAGGGAACTTG  342

seq1  CTGAGATACAGTCTGCGTGGACCTGTAAAGAAAGTGGAAGGAAGTGGGTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATACAGTCTGCGTGGACCTGTAAAGAAAGTGGAAGGAAGTGGGTG  392

seq1  AGTGCCTGGAAGAAGATGGGAAAGGGCTGGGTGATCTGGGACAGAGAAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTGGAAGAAGATGGGAAAGGGCTGGGTGATCTGGGACAGAGAAGT  442

seq1  AGCATGTTTAGTTCATGGTTTGAAGCAGAGGTTCTCAACGCGTGGGTCAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTTTAGTTCATGGTTTGAAGCAGAGGTTCTCAACGCGTGGGTCAC  492

seq1  AACCCCTTTGGCACATATTCAAATTTTGGCAATATTTAAATTGTGATTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTTTGGCACATATTCAAATTTTGGCAATATTTAAATTGTGATTCA  542

seq1  TAAAAGTAGCAAAATCACAGTAATAAAGTAGGAAAGATCACAACATGAGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTAGCAAAATCACAGTAATAAAGTAGGAAAGATCACAACATGAGG  592

seq1  ACCTAGGTTAAAGGGTCACAGCATTAGGAAGGCTGAGAGCCACCACTGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGTTAAAGGGTCACAGCATTAGGAAGGCTGAGAGCCACCACTGTA  642

seq1  AAGGAATGGAGTTGGGTGTCCTGTTGAAAAAGGACTACAGAGGAGCCATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATGGAGTTGGGTGTCCTGTTGAAAAAGGACTACAGAGGAGCCATG  692

seq1  GAGGAACCCAAATTGAAAGGTAGTGAAATAATCTGTGTGAATGATGGCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACCCAAATTGAAAGGTAGTGAAATAATCTGTGTGAATGATGGCAG  742

seq1  TGATGGGAATGATAGGATGTGTTGGGCAGAATGTAAGAATTTGATGAATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGAATGATAGGATGTGTTGGGCAGAATGTAAGAATTTGATGAATT  792

seq1  CTTGAAAGAAGAAAAATATTCAAGGGCTAGTTCAACAAATTTCCCTTGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGAAGAAAAATATTCAAGGGCTAGTTCAACAAATTTCCCTTGTG  842

seq1  GGGATAGGAAAGACTGTAAAAGATACAGGCGTAAAATATTCTTCTGTCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGAAAGACTGTAAAAGATACAGGCGTAAAATATTCTTCTGTCTT  892

seq1  TTTACTATCTAAACTGATGCTTAAGTGTTTTAATATCATTTCAAGTCTGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATCTAAACTGATGCTTAAGTGTTTTAATATCATTTCAAGTCTGC  942

seq1  ATACTTCCTTAATCCACTGGACCCCTTTTCCTTTGGAATGCCAGGCTTGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCCTTAATCCACTGGACCCCTTTTCCTTTGGAATGCCAGGCTTGT  992

seq1  GAACTTTTCATGTTTTCCCTCATCTCTTTTACAGGTCACAAGCATAGGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTTCATGTTTTCCCTCATCTCTTTTACAGGTCACAAGCATAGGCA  1042

seq1  GATTTCTTCTACAGAGGTTCCACCAAATAAGGAAACATTATTTGTCAGTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTCTACAGAGGTTCCACCAAATAAGGAAACATTATTTGTCAGTG  1092

seq1  TTGCCAAACATAGTACAGGAGGCTACCAAGAGATCAGCAGAGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAACATAGTACAGGAGGCTACCAAGAGATCAGCAGAGAATTC  1139