BAC Information

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BAC

Clone NameB6Ng01-076I19
Chromosome19 (Build37)
Map Location 32,218,881 - 32,339,287
singlet/doubletdoublet
Overlap geneSgms1
Upstream genePrkg1, 8430431K14Rik, 1810073H04Rik, Asah2, EG668042
Downstream gene2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076I19.bB6Ng01-076I19.g
ACCDH892788DH892789
length542466
definitionDH892788|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I19, 5' end.DH892789|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,218,881 - 32,219,411)(32,338,815 - 32,339,287)
sequence
gaattctttttcaagcttttaaaattcatgaagcatccaaaataaaataa
aataaaatgaaataaaataaaatattataaaaagagccttggagcccagt
cccagcgattatatccccaaaacaagtcctgacctaaggctcacgaatca
ttgtggaggagggagcacaacgactgtaagagccagaggatcagggagac
tgctgtgagactgtgcctcctaagaatgtcccaagtcacattcgtgagtc
tcacctacatgactgcctaaatgtgagctggacaaggatggcatcgacag
gcacgaaaagtggctgggtgaagaccacgaagcctcacccctaacacaaa
ggctccaggcaactaagaactgctgcgggtgggagacacagtcttcctcc
gagacaagctcaccaattggttattccaattgcaaatgggccgtcctgaa
aacatactcgcaaataatattatacctacagagcagttgtatttatgtat
tttggaatatatatgtatatacatatatgctggtaacgacaa
atggacttaaccatgacccccatcttcctgaagcatctggcctggtagaa
tagtggcatgcccttttgaagattagttgcaatgctaatcagagagcact
accttaacagggctggaccaaggctttccaaaaggctctatgtactctta
ttcagcatctaatatacggtacccaggaagaagggagtagaaatggagat
gataccacttggcaacaccccattggcctcccagccagcatcagaccctg
cttctgcaaccttctgacaagggctaaatgggagctgccaggctttcagt
accatattgggatttatgaggctatctactttggggactgagcagctagt
gtgttccctcctctgcacttccagggtgttattgtcagacatcttggttc
ctatcttataagacagtccaattaatgtgctgtagagtatgttggggttt
tgtttattttgagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32218881_32219411
seq2: B6Ng01-076I19.b_44_573

seq1  GAATTCTTTTTCAAAGCTTTTAAAATTCATGATGTATCCAAAATAAAATA  50
      |||||||||||| ||||||||||||||||||| | |||||||||||||||
seq2  GAATTCTTTTTC-AAGCTTTTAAAATTCATGAAGCATCCAAAATAAAATA  49

seq1  AAATAAAATAAAATAAAATAAAATAAAATAAAAAGAGCCTTGGAGCCCAG  100
      ||||||||| |||||||||||||||  |||||||||||||||||||||||
seq2  AAATAAAATGAAATAAAATAAAATATTATAAAAAGAGCCTTGGAGCCCAG  99

seq1  TCCCAGCGATTATATCCACAAAACAAGTCCTGACCTAAGGCTCAGGAATC  150
      ||||||||||||||||| |||||||||||||||||||||||||| |||||
seq2  TCCCAGCGATTATATCCCCAAAACAAGTCCTGACCTAAGGCTCACGAATC  149

seq1  ATTGTGGAGGAGGGAGCAGAACGACTGTAAGAGCCAGAGGATCAGGGAGA  200
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATTGTGGAGGAGGGAGCACAACGACTGTAAGAGCCAGAGGATCAGGGAGA  199

seq1  CTGCTGTGAGACTGTGCCTCCTAAGAATGTCCCAAGTCACATTCGTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGAGACTGTGCCTCCTAAGAATGTCCCAAGTCACATTCGTGAGT  249

seq1  CTCACCTACATGACTGCCTAAATGTGAGCTGGACAAGGATGGCATCGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTACATGACTGCCTAAATGTGAGCTGGACAAGGATGGCATCGACA  299

seq1  GGCACGAAAAGTGGCTGGGTGAAGACCACGAAGCCTCACCCCTAACACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGAAAAGTGGCTGGGTGAAGACCACGAAGCCTCACCCCTAACACAA  349

seq1  AGGCTCCAGGCAACTAAGAACTGCTGCGGGTGGGAGACACAGTCTTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCAGGCAACTAAGAACTGCTGCGGGTGGGAGACACAGTCTTCCTC  399

seq1  CGAGACAAGCACACCAATTGGTTATTCCAATAACAAATGGGCAGTCCTGA  450
      |||||||||| ||||||||||||||||||||  ||||||||| |||||||
seq2  CGAGACAAGCTCACCAATTGGTTATTCCAATTGCAAATGGGCCGTCCTGA  449

seq1  AAACATACACGCAAGTAATATTATACAGACAGAGCAGTTGTATTTATGTA  500
      |||||||| ||||| |||||||||||  ||||||||||||||||||||||
seq2  AAACATACTCGCAAATAATATTATACCTACAGAGCAGTTGTATTTATGTA  499

seq1  TTTTGGAATATATATGTATATACATATATGC  531
      |||||||||||||||||||||||||||||||
seq2  TTTTGGAATATATATGTATATACATATATGC  530

seq1: chr19_32338815_32339287
seq2: B6Ng01-076I19.g_66_537 (reverse)

seq1  TGTCTCAAAATAAACAAAACCCCAACATACTCTACAGCACATTAATTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAAATAAACAAAACCCCAACATACTCTACAGCACATTAATTGGA  50

seq1  CTGTCTTATAAGATAGGAACCAAGATGTCTGACAATGACACCCTGGAAGT  100
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGTCTTATAAGATAGGAACCAAGATGTCTGACAATAACACCCTGGAAGT  100

seq1  GCAGAGGAGGGAACACACTAGCTGCTCAGTCCCCAAAGTAGATAGCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGAGGGAACACACTAGCTGCTCAGTCCCCAAAGTAGATAGCCTCA  150

seq1  TAAATCCCAATATGGTACTGAAAGCCTGGCAGCTCCCATTTAGCCCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCCAATATGGTACTGAAAGCCTGGCAGCTCCCATTTAGCCCTTGT  200

seq1  CAGAAGGTTGCAGAAGCAGGGTCTGATGCTGGCTGGGAGGCCAATGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGTTGCAGAAGCAGGGTCTGATGCTGGCTGGGAGGCCAATGGGGT  250

seq1  GTTGCCAAGTGGTATCATCTCCATTTCTACTCCCTTCTTCCTGGGTACCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAAGTGGTATCATCTCCATTTCTACTCCCTTCTTCCTGGGTACCG  300

seq1  TATATTAGATGCTGAATAAGAGTACATAGAGCCTTTTGGAAAGCCTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGATGCTGAATAAGAGTACATAGAGCCTTTTGGAAAGCCTTGGT  350

seq1  CCAGCCCTGTTAAGGTAGTGCTCTCTGATTAGCATTGCAACTAATCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCTGTTAAGGTAGTGCTCTCTGATTAGCATTGCAACTAATCTTCA  400

seq1  AAAGGGCATGCCACTATTCTACCAGGCCAGATGCTTCAGGAAGATGGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCATGCCACTATTCTACCAGGCCAGATGCTTCAGGAAGATGGGGG  450

seq1  TCATGGTTAAGACCAGTGAATTC  473
      ||||||||||| ||| |||||||
seq2  TCATGGTTAAGTCCA-TGAATTC  472