MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-077L09
Chromosome	19 (Build37)
Map Location	18,507,130 - 18,507,683
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Pcsk5, Eef1a1-ps1
Downstream gene	LOC383440, Ostf1, LOC666712, BC016495, LOC100042193, 2410127L17Rik, LOC100042184, D030056L22Rik, Trpm6, Rorb
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pcsk5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18552 MGI:97515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 24 Proteins

name	Eef1a1-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235503 MGI:2388571
definition	note : eukaryotic translation elongation factor 1 alpha 1, pseudogene 1 pseudo : _no_value

name	LOC383440 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ostf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20409 MGI:700012
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666712 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 298 ESTs, 10 Proteins pseudo : _no_value

name	BC016495 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225994 MGI:2147434
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042193 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	2410127L17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67383 MGI:1914633
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042184 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs pseudo : _no_value

name	D030056L22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225995 MGI:3583960
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trpm6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225997 MGI:2675603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rorb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:225998 MGI:1343464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pcsk5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270399 GeneID:18552 MGI:97515
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 24 Proteins product : proprotein convertase subtilisin/kexin type 5 transcript_id : XM_129214.6

name	Ostf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362503 GeneID:20409 MGI:700012
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : osteoclast stimulating factor 1 transcript_id : NM_017375.2

name	BC016495 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891683 GeneID:225994 MGI:2147434
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC016495 transcript_id : NM_145497.2

name	LOC100042193 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270429 GeneID:100042193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042193 transcript_id : XM_001477736.1

name	2410127L17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126215550 GeneID:67383 MGI:1914633
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410127L17 gene transcript_id : NM_026120.4

name	D030056L22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803554 GeneID:225995 MGI:3583960
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D030056L22 gene transcript_id : NM_177640.3

name	Trpm6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23510304 GeneID:225997 MGI:2675603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily M, member 6 transcript_id : NM_153417.1

name	Rorb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112821699 GeneID:225998 MGI:1343464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAR-related orphan receptor beta transcript_id : NM_001043354.1

name	Rorb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112821691 GeneID:225998 MGI:1343464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAR-related orphan receptor beta transcript_id : NM_146095.3

name	Pcsk5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270400 GeneID:18552 MGI:97515
definition	codon_start : 1 product : proprotein convertase subtilisin/kexin type 5 protein_id : XP_129214.5

name	Ostf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22267440 GeneID:20409 MGI:700012
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IDA] codon_start : 1 product : SH3 domain protein 3 protein_id : NP_059071.1

name	BC016495 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703978 GeneID:225994 MGI:2147434
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004849 - uridine kinase activity [Evidence IEA] GO_process : GO:0019363 - pyridine nucleotide biosynthesis [Evidence IEA] codon_start : 1 product : cDNA sequence BC016495 protein_id : NP_663472.1

name	LOC100042193 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270430 GeneID:100042193
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477786.1

name	2410127L17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981066 CCDS:CCDS29689.1 GeneID:67383 MGI:1914633
definition	codon_start : 1 product : hypothetical protein LOC67383 protein_id : NP_080396.2

name	D030056L22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244042 CCDS:CCDS29690.1 GeneID:225995 MGI:3583960
definition	codon_start : 1 product : hypothetical protein LOC225995 protein_id : NP_808308.1

name	Trpm6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510305 CCDS:CCDS29691.1 GeneID:225997 MGI:2675603
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0031526 - brush border membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005261 - cation channel activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0030001 - metal ion transport [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 function : alpha-kinase class protein kinase note : transient receptor potential cation channel 6/channel-kinase 2 product : transient receptor potential cation channel, subfamily M, member 6 protein_id : NP_700466.1

name	Rorb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112821700 GeneID:225998 MGI:1343464
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : RAR-related orphan receptor beta isoform 1 protein_id : NP_001036819.1

name	Rorb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112821692 GeneID:225998 MGI:1343464
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : RAR-related orphan receptor beta isoform 2 protein_id : NP_666207.3

name	LOC383440 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383440
definition	number : 1 pseudo : _no_value

name	LOC666712 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270425 GeneID:666712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 298 ESTs, 10 Proteins product : similar to 60S ribosomal protein L7a (Surfeit locus protein 3) pseudo : _no_value transcript_id : XR_033346.1

name	LOC100042184 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270426 GeneID:100042184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : similar to ribosomal protein L23a pseudo : _no_value transcript_id : XR_033372.1

clone name	MSMg01-394F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547E01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-158J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233B04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-077L09.b	B6Ng01-077L09.g
ACC	DH893614	DH893615
length	1,145	548
definition	DH893614\|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L09, 5' end.	DH893615\|Mus musculus domesticus DNA, BAC clone: B6Ng01-077L09, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccaatcagaatgtctaagatcaaaaattcaggtgacagc agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg ggagtgcaggcttgtacaaccactctggaaatcagtctggcagttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa agaactcacacaatatgtactcactgataagtggatattagcccaaaacc taggatacccaagatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtggacgctatgcccctccttagaagtgggaa caaaacacccttggaaggagttacagagacaaagtttggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataaac aacatccaaacgctgacaccattgcatacactagcaagattttatcaaaa ggtcccagatgtagctgtctcttgtgagactatgccggggcctagcaaac acagaagtggatgctcacagtcagctaatggatggatcacagggctccca tggaggagctagagaaagtacccaagagctaaaggatctgcaccctatag gtggaacaacattatgaattaccagtacccggagctcttggctctagctg catatgtaccaagatggctagtcgccatcactgtaaggaagccattggac atcaactttaattgcccgacagggacgccaggcaaagggatgcgg	aactacagaagacttttctacactctgtactagatagtcattggccacgt gtttctgtgagggtgaggagtgatagatgatggtgttaaaggttcagtac acataccggttttttgagcatatggagaacagcttcagtcccagtagatt agtcctctgaagagtgccagcggtctagtttgtttgtaaatggaatatga agaattttgagtggagtaccaactgtgtcctaatgaccctggagagttct aaatcttggtctctaaatttgatcacttattaaaatttatacctatggat cacagggcccccaatggaggagctagagaaagtacccaaggagctaaagg gaactgcaaccctataggtggaaaaacaatatgaactaaccagtaccccg gagctcttgactcaagctgcatatgtatcaaaagatggcctagtcggcca tcactggaaagagagttccactggacatgcaaactttatatgccccagta caggggaacgccagggccaaaaagggggagtgggtgggtaggggagtg
quality values	Open. Hide. 61 47 43 40 61 61 61 43 31 61 61 61 61 61 61 61 61 52 49 61 55 61 61 61 61 59 61 59 52 43 31 44 26 55 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 55 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 59 59 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 55 44 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 52 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 55 61 61 50 61 61 55 55 61 61 61 61 61 61 61 61 61 55 61 61 55 55 61 55 61 61 61 53 61 61 61 53 61 61 61 61 61 61 61 61 52 61 50 61 61 61 61 61 61 61 53 61 61 61 53 61 50 61 61 61 61 61 50 61 61 61 61 61 61 61 52 53 50 61 61 50 61 61 50 61 61 61 61 50 61 61 52 61 53 61 50 61 61 50 61 61 61 61 61 61 61 47 61 61 53 47 61 52 45 61 61 53 61 61 61 43 61 61 61 34 61 61 61 57 46 30 57 57 35 53 53 50 50 53 50 53 53 57 53 50 53 57 53 33 53 52 53 57 47 45 53 50 53 57 47 45 53 35 57 57 57 50 57 57 45 52 50 45 53 50 57 33 53 57 53 53 57 50 53 53 53 52 40 53 57 57 57 45 42 57 45 53 57 57 52 35 43 39 53 53 45 53 57 52 30 41 47 47 38 57 50 52 22 57 41 29 47 42 53 46 32 53 45 52 42 50 45 50 57 45 57 28 53 44 43 46 42 57 46 33 53 50 45 57 43 50 50 53 38 53 53 57 41 43 45 53 50 34 57 50 57 41 57 57 45 30 52 50 57 34 57 31 50 57 50 57 40 53 53 37 57 37 39 30 28 53 47 53 50 53 46 33 38 53 50 39 44 39 52 52 25 52 57 30 47 46 38 47 40 34 30 31 38 57 39 39 37 29 38 41 53 53 39 40 47 37 22 57 52 36 42 40 34 40 35 37 57 33 36 35 21 57 53 32 37 57 39 46 40 44 23 39 40 33 44 15 37 27 33 37 57 44 22 53 29 23 53 53 35 32 27 33 40 53 37 31 28 53 36 29 33 37 44 28 25 28 33 32 31 30 36 25 30 51 46 21 28 24 45 29 29 44 45 41 27 32 30 47 32 23 12 46 32 30 43 38 48 36 46 37 29 31 29 29 29 31 27 24 31 29 25 29 44 29 31 29 29 24 29 28 32 29 29 17 32 29 48 33 31 11 51 51 39 28 33 29 29 46 43 38 23 41 11 25 39 36 17 17 31 22 29 24 26 19 29 29 29 27 29 33 33 32 29 32 23 25 29 20 35 14 29 21 27 34 28 32 19 46 51 30 11 29 34 36 19 28 29 43 28 17 21 29 24 20 36 25 13 28 33 23 20 10 23 23 24 24 13 27 29 31 34 34 31 25 31 30 17 13 20 23 25 11 18 30 27 20 21 22 30 30 19 19 38 23 18 20 13 38 22 16 5 14 27 26 25 8 17 13 26 33 14 28 31 15 17 51 30 11 21 22 18 26 28 13 8 17 13 16 23 30 17 35 9 5 10 8 9 15 6 21 10 30 7 17 26 23 12 10 8 27 9 13 11 34 13 9 7 15 14 22 12 26 24 15 30 26 31 32 8 6 34 12 21 15 22 21 16 30 29 21 7 9 29 13 17 15 17 18 29 16 14 4 4 14 10 12 15 22 29 26 23 5 5 12 18 12 22 12 4 3 4 3 3 19 13 26 17 7 9 12 5 6 5 6 3 6 4 9 9 5 7 12 11 2 5 9 6 6 9 7 6 3 11 7 22 16 11 10 5 5 4 2 5 10 23 20 19 23 24 6 5 10 11 6 11 12 11 4 14 4 4 14 16 4 18 7 7 10 16 4 13 8 5 3 11 18 13 30 10 14 10 17 7 8 11	Open. Hide. 38 39 30 28 27 30 13 23 28 49 55 34 61 61 61 61 59 55 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 59 52 59 44 44 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 55 61 61 55 61 55 61 61 61 61 61 61 61 61 55 61 61 61 55 55 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 50 55 55 61 55 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 52 61 61 61 61 61 61 61 61 61 61 52 61 61 61 53 53 53 50 53 53 61 61 61 61 61 61 61 61 61 61 61 61 23 61 61 47 61 53 61 53 61 61 47 61 43 61 53 61 61 47 61 61 61 61 61 57 57 53 57 53 57 57 53 53 53 53 53 53 53 53 53 47 53 53 47 57 53 53 53 53 57 57 57 57 53 57 52 57 53 53 53 53 53 53 50 53 53 53 53 53 46 37 57 57 53 52 38 47 47 38 42 46 47 43 41 34 52 47 47 47 50 57 57 57 57 57 38 52 57 57 57 46 57 57 46 34 46 34 41 43 46 57 50 31 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_18507130_18507683
seq2: B6Ng01-077L09.g_67_620 (reverse)

seq1  CACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTA  50

seq1  CTGGGGCATATAAAGTTTGCATGTCCAGTGGAACTCTCTTTCCAGTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCATATAAAGTTTGCATGTCCAGTGGAACTCTCTTTCCAGTGATG  100

seq1  GCCGACTAGGCCATCTTTTGATACATATGCAGCTTGAGTCAAGAGCTCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGACTAGGCCATCTTTTGATACATATGCAGCTTGAGTCAAGAGCTCCG  150

seq1  GGGTACTGGTTAGTTCATATTGTTTTTCCACCTATAGGGTTGCAGTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTGGTTAGTTCATATTGTTTTTCCACCTATAGGGTTGCAGTTCCC  200

seq1  TTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGAT  250

seq1  CCATAGGTATAAATTTTAATAAGTGATCAAATTTAGAGACCAAGATTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGGTATAAATTTTAATAAGTGATCAAATTTAGAGACCAAGATTTAG  300

seq1  AACTCTCCAGGGTCATTAGGACACAGTTGGTACTCCACTCAAAATTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCCAGGGTCATTAGGACACAGTTGGTACTCCACTCAAAATTCTTC  350

seq1  ATATTCCATTTACAAACAAACTAGACCGCTGGCACTCTTCAGAGGACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCATTTACAAACAAACTAGACCGCTGGCACTCTTCAGAGGACTAA  400

seq1  TCTACTGGGACTGAAGCTGTTCTCCATATGCTCAAAAAACCGGTATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGGGACTGAAGCTGTTCTCCATATGCTCAAAAAACCGGTATGTGT  450

seq1  ACTGAACCTTTAACACCATCATCTATCACTCCTCACCCTCACAGAAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACCTTTAACACCATCATCTATCACTCCTCACCCTCACAGAAACAC  500

seq1  GTGGCCAATGACTATCTAGTACAGAGTGTAGAAAAGTCTTCTGTAGTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAATGACTATCTAGTACAGAGTGTAGAAAAGTCTTCTGTAGTTGA  550

seq1  ATTC  554
      ||||
seq2  ATTC  554

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information