BAC Information

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BAC

Clone NameB6Ng01-079K23
Chromosome19 (Build37)
Map Location 32,515,250 - 32,645,812
singlet/doubletdoublet
Overlap geneLOC672490, LOC100042823, Minpp1
Upstream genePrkg1, 1810073H04Rik, Asah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138
Downstream genePapss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079K23.bB6Ng01-079K23.g
ACCDH895023DH895024
length1,2301,172
definitionDH895023|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K23, 5' end.DH895024|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,515,250 - 32,516,501)(32,644,617 - 32,645,812)
sequence
gaattcactctgttaaccaggcttgcctgaaacacacagagatccacctg
cctctgtctccaagctctaggttcaaaggcgtgggccactgctacccagc
agaatctgtgttctttatggacagactttaacagctggttgatatttccc
atgagtacttggccctcactggccagttgacccttgaagtctatctagtt
tttaggctctcatcaggagatgaattgtcccagaaaactgccacagctgc
tcagggcactctgccattgctgcagtgctgtgggacccaaaatctgttcc
ttcctagcctaaatacccactgtgcagacgcaggcttcttgtctccctgg
cttagtatttttatggaattcttgagtgtttgaataagtgagtcttctga
ttcttgttactgctctctggactcttttcctcctgctgggttgccgtgtc
caatttcaatatgatgggttttgttttatattattatattttgtcatgtt
tggttgttatctcttaaaagccttttcaatcccagcacttgggaggcaga
gacaggcggatttctgagttcgagaccagcctggtctacagagtgagttc
caggacagccagagctacacaaagaaaccctgtctcgaaaaaaacaaaac
caaaaaaataaaataaaataaaataaaatctaatgagagtcagaacgtac
tgggggagcagggctgggaggagtagagtgagggactagaaaatacaatt
atgatataatgtgtgagaaaataatctattttcagtaaagggaaaaaatg
ggaatggcctagagatcacacggaatacaggtcacttttacattctataa
tgatcactttcatgagtattttcatatcatccccaccaatttctttacct
tttaaatacttaacattgtataaattatttggaaacgacaaatgcttagc
aaggttagagcgcagtcttgagacagagaaacatgtgttgtagggcatac
tgcctcctacaggtgcttagcatgctttggacaagaagagctcaccacat
cggactgtctgcagctgaatcagactgttcttctgtttgaaagtgtttgg
agccgcgcccacattcgcggtacaagatgcgctgaagctgtgttctagtg
taacaataatctgccaataggcaaaggttcccacttcaattgtctctcgg
cctcccgtgacgtcaacttcggccaagggc
gaattcatttcctggacgcttatttctcacctttatttgtcactcaaaac
tagaatgttcccaacaaacagagaagatgtgagatgaaccatgcatgaaa
aacccttcttttgcttcaggagagacaggcatgggatggagaatcatttg
tcctgtgatgggtaatcagacacattctgtgctcactcaaaatgacagat
aatgtggtttgatgccttcgagttgtgaaggagcctagagtttatctgtg
ctaatcccctcactcaaatctaggctctgaagccaggctcaccctgtgtc
cctaagaatggttctgaactatattttaccactcttgcataaagttaatt
ttcaaataccatttcccctcacctaccaagaatactatctttttcaaaac
tcatttatttgctattcaattttacctgttcatcttcactgtagaagatt
tatcaaatacaagaaaggccatcagccaggcatagtggtgtactattttg
atcccagcacttgggaggtagaggcaggcagatcaatgtgactttaaggc
aggactggtctacatagtgagtttcaagacagccaggagcacctagaaag
accctgtctttaaaaacaaaaaacaaaacaaaacaaaaaacagaaaaaga
aagcccaaaagatgaaatcaaagttattcataatattcatctaccaaaag
aaaccataggctctttttttctatgaattctcttttaattttaatgaaaa
tgtctgtttttatgatctgctccttaatttaacacatttccctacattat
tagatattcttctatgagctttcatgggccacatagcttatttgtcccgt
tcattctggagagctaagctgtttccaattgtttagctctctgcgcagta
cagagatggaatttttaaagatgagtctttgtagccatttatttccggag
acagttcccatccataaactgtgagaccaagagtaccaaacatttagact
ggagctcacattgcatgtttcaggcagccctgataaatacttcacacctc
aactatagcagaggcaaagtcttcatcagctgctataagaaacagtctta
tccagcactcaggagaagagccaggcgattctgagtcagcccagcctgtt
ctcacaagtgagtctaggacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32515250_32516501
seq2: B6Ng01-079K23.b_48_1277

seq1  GAATTCACTCTGTTAACCAGGCTTGCCTGAAACACACAGAGATCCACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTTAACCAGGCTTGCCTGAAACACACAGAGATCCACCTG  50

seq1  CCTCTGTCTCCAAGCTCTAGGTTCAAAGGCGTGGGCCACTGCTACCCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCTCCAAGCTCTAGGTTCAAAGGCGTGGGCCACTGCTACCCAGC  100

seq1  AGAATCTGTGTTCTTTATGGACAGACTTTAACAGCTGGTTGATATTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTGTGTTCTTTATGGACAGACTTTAACAGCTGGTTGATATTTCCC  150

seq1  ATGAGTACTTGGCCCTCACTGGCCAGTTGACCCTTGAAGTCTATCTAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTACTTGGCCCTCACTGGCCAGTTGACCCTTGAAGTCTATCTAGTT  200

seq1  TTTAGGCTCTCATCAGGAGATGAATTGTCCCAGAAAACTGCCACAGCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCTCTCATCAGGAGATGAATTGTCCCAGAAAACTGCCACAGCTGC  250

seq1  TCAGGGCACTCTGCCATTGCTGCAGTGCTGTGGGACCCAAAATCTGTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCACTCTGCCATTGCTGCAGTGCTGTGGGACCCAAAATCTGTTCC  300

seq1  TTCCTAGCCTAAATACCCACTGTGCAGACGCAGGCTTCTTGTCTCCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGCCTAAATACCCACTGTGCAGACGCAGGCTTCTTGTCTCCCTGG  350

seq1  CTTAGTATTTTTATGGAATTCTTGAGTGTTTGAATAAGTGAGTCTTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTATTTTTATGGAATTCTTGAGTGTTTGAATAAGTGAGTCTTCTGA  400

seq1  TTCTTGTTACTGCTCTCTGGACTCTTTTCCTCCTGCTGGGTTGCCGTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTACTGCTCTCTGGACTCTTTTCCTCCTGCTGGGTTGCCGTGTC  450

seq1  CAATTTCAATATGATGGGTTTTGTTTTATATTATTATATTTTGTCATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTCAATATGATGGGTTTTGTTTTATATTATTATATTTTGTCATGTT  500

seq1  TGGTTGTTATCTCTTAAAAGCCTTTTCAATCCCAGCACTTGGGAGGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTTATCTCTTAAAAGCCTTTTCAATCCCAGCACTTGGGAGGCAGA  550

seq1  GACAGGCGGATTTCTGAGTTCGAGACCAGCCTGGTCTACAGAGTGAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCGGATTTCTGAGTTCGAGACCAGCCTGGTCTACAGAGTGAGTTC  600

seq1  CAGGACAGCCAGAGCTACACAAAGAAACCCTGTCTCGAAAAAAACAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGAGCTACACAAAGAAACCCTGTCTCGAAAAAAACAAAAC  650

seq1  CAAAAAAATAAAATAAAATAAAATAAAATCTAATGAGAGTCAGAACGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAATAAAATAAAATAAAATAAAATCTAATGAGAGTCAGAACGTAC  700

seq1  TGGGGGAGCAGGGCTGGGAGGAGTAGAGTGAGGGACTAGAAAATACAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGCAGGGCTGGGAGGAGTAGAGTGAGGGACTAGAAAATACAATT  750

seq1  ATGATATAATGTGTGAGAAAATAATCTATTTTCAGTAAAGGGAAAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAATGTGTGAGAAAATAATCTATTTTCAGTAAAGGGAAAAAATG  800

seq1  GGAATGGCCTAGAGATCACACGGAATACAGGTCACTTTTACATTCTATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGCCTAGAGATCACACGGAATACAGGTCACTTTTACATTCTATAA  850

seq1  TGATCACTTTCATGAGTATTTTCATATCATCCCCACCAATTTCTTTACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACTTTCATGAGTATTTTCATATCATCCCCACCAATTTCTTTACCT  900

seq1  TTTAAATAACTTAACATTGTATAAATTATTTGGAAACGACAAATGCTTAG  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAT-ACTTAACATTGTATAAATTATTTGGAAACGACAAATGCTTAG  949

seq1  CAAGGTTAGAGCGCAGCCTTGAAGACAGAGAAACATGTGTTGTAGGGCAA  1000
      |||||||||||||||| |||| |||||||||||||||||||||||||| |
seq2  CAAGGTTAGAGCGCAGTCTTG-AGACAGAGAAACATGTGTTGTAGGGC-A  997

seq1  TACTGCCCCCTACAGGTGCTTAGCATGCTTTGGACAAGAGAGGCTCCACC  1050
      ||||||| |||||||||||||||||||||||||||||||   ||| ||||
seq2  TACTGCCTCCTACAGGTGCTTAGCATGCTTTGGACAAGAAGAGCT-CACC  1046

seq1  CAACCATCGGACTGTCCTGCAGCCTGAATCAGACCTGTCCTCTGTTTTGA  1100
          ||||||||||| |||||| |||||||||||   || |||||||   
seq2  ---ACATCGGACTGT-CTGCAG-CTGAATCAGACTGTTCTTCTGTTT--G  1089

seq1  AAAGTGTTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACA  1150
      |||||||| ||||||||||||||||||| || |||||||| ||||||| |
seq2  AAAGTGTTTGGAGCCGCGCCCACATTCG-CGGTACAAGAT-GCGCTGA-A  1136

seq1  GCTGTGTTCTAAGTGGTAAACAAATAATCTGCGCATATGCCGAGGGTGGT  1200
      |||||||||| ||| ||||   ||||||||||  ||| ||  |    |||
seq2  GCTGTGTTCT-AGT-GTAA--CAATAATCTGCCAATAGGCAAA----GGT  1178

seq1  TCTCCACTCCATGTG---CTCTGCCTTCCCCGTGACGTCAAC-TCGGCCA  1246
      || ||||| ||  ||   ||| ||||  |||||||||||||| |||||||
seq2  TC-CCACTTCAATTGTCTCTCGGCCT--CCCGTGACGTCAACTTCGGCCA  1225

seq1  ATGGGC  1252
      | ||||
seq2  A-GGGC  1230

seq1: chr19_32644617_32645812
seq2: B6Ng01-079K23.g_67_1238 (reverse)

seq1  CTGTCCTAGAACTCACTTTGTAGAACAGGCTGGCCTCGAACTCAGAAATC  50
      ||||||||| ||||||||   |||||||||||| ||   ||||||||   
seq2  CTGTCCTAG-ACTCACTTGTGAGAACAGGCTGGGCT--GACTCAGAA--T  45

seq1  CGCCTGCCTCCTTCTCCTGAGTGCTGGGATTAAAGGCTGTTTCTTATAAG  100
      |||||| || ||||||||||||||| ||||  ||| ||||||||||| ||
seq2  CGCCTGGCT-CTTCTCCTGAGTGCT-GGAT--AAGACTGTTTCTTAT-AG  90

seq1  CAGCTGAGTGGAGACTTTTGCCTCTGCTAATAAGGTTGA-GTGTGAAGTA  149
      ||||||| || |||| |||||||||||| |||  ||||| ||||||||||
seq2  CAGCTGA-TGAAGAC-TTTGCCTCTGCT-ATA--GTTGAGGTGTGAAGTA  135

seq1  TTTATCAGGGCTGCCTGAAACCATGCAATGTGAGCTCCAGTCTTAAAATG  199
      |||||||||||||||||||| ||||||||||||||||||||||  |||||
seq2  TTTATCAGGGCTGCCTGAAA-CATGCAATGTGAGCTCCAGTCT--AAATG  182

seq1  TTTGGTACTCTTTGGTCTCACAGTTTTATGGATGGGAAACTTGTCCTCCG  249
      |||||||||| |||||||||||| ||||||||||||||   ||| |||||
seq2  TTTGGTACTC-TTGGTCTCACAG-TTTATGGATGGGAA--CTGT-CTCCG  227

seq1  GAAATAAAATGGCTACAAAGACTCATCTTTTAAAAATTCCATCTCTGTAC  299
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAAAT-AAATGGCTACAAAGACTCATC-TTTAAAAATTCCATCTCTGTAC  275

seq1  TGCGCAGAGAGCTAAACAATTGGAAACAGCTTAGCTCTCCAGAATGAACG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCAGAGAGCTAAACAATTGGAAACAGCTTAGCTCTCCAGAATGAACG  325

seq1  GGACAAATAAGCTATGTGGCCCATGAAAGCTCATAGAAGAATATCTAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAATAAGCTATGTGGCCCATGAAAGCTCATAGAAGAATATCTAATA  375

seq1  ATGTAGGGAAATGTGTTAAATTAAGGAGCAGATCATAAAAACAGACATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGGAAATGTGTTAAATTAAGGAGCAGATCATAAAAACAGACATTT  425

seq1  TCATTAAAATTAAAAGAGAATTCATAGAAAAAAAGAGCCTATGGTTTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAATTAAAAGAGAATTCATAGAAAAAAAGAGCCTATGGTTTCTT  475

seq1  TTGGTAGATGAATATTATGAATAACTTTGATTTCATCTTTTGGGCTTTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGATGAATATTATGAATAACTTTGATTTCATCTTTTGGGCTTTCT  525

seq1  TTTTCTGTTTTTTGTTTTGTTTTGTTTTTTGTTTTTAAAGACAGGGTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTTTTTGTTTTGTTTTGTTTTTTGTTTTTAAAGACAGGGTCTT  575

seq1  TCTAGGTGCTCCTGGCTGTCTTGAAACTCACTATGTAGACCAGTCCTGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTGCTCCTGGCTGTCTTGAAACTCACTATGTAGACCAGTCCTGCC  625

seq1  TTAAAGTCACATTGATCTGCCTGCCTCTACCTCCCAAGTGCTGGGATCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCACATTGATCTGCCTGCCTCTACCTCCCAAGTGCTGGGATCAA  675

seq1  AATAGTACACCACTATGCCTGGCTGATGGCCTTTCTTGTATTTGATAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTACACCACTATGCCTGGCTGATGGCCTTTCTTGTATTTGATAAAT  725

seq1  CTTCTACAGTGAAGATGAACAGGTAAAATTGAATAGCAAATAAATGAGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACAGTGAAGATGAACAGGTAAAATTGAATAGCAAATAAATGAGTT  775

seq1  TTGAAAAAGATAGTATTCTTGGTAGGTGAGGGGAAATGGTATTTGAAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAGATAGTATTCTTGGTAGGTGAGGGGAAATGGTATTTGAAAAT  825

seq1  TAACTTTATGCAAGAGTGGTAAAATATAGTTCAGAACCATTCTTAGGGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTATGCAAGAGTGGTAAAATATAGTTCAGAACCATTCTTAGGGAC  875

seq1  ACAGGGTGAGCCTGGCTTCAGAGCCTAGATTTGAGTGAGGGGATTAGCAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGAGCCTGGCTTCAGAGCCTAGATTTGAGTGAGGGGATTAGCAC  925

seq1  AGATAAACTCTAGGCTCCTTCACAACTCGAAGGCATCAAACCACATTATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACTCTAGGCTCCTTCACAACTCGAAGGCATCAAACCACATTATC  975

seq1  TGTCATTTTGAGTGAGCACAGAATGTGTCTGATTACCCATCACAGGACAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTGAGTGAGCACAGAATGTGTCTGATTACCCATCACAGGACAA  1025

seq1  ATGATTCTCCATCCCATGCCTGTCTCTCCTGAAGCAAAAGAAGGGTTTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTCCATCCCATGCCTGTCTCTCCTGAAGCAAAAGAAGGGTTTTT  1075

seq1  CATGCATGGTTCATCTCACATCTTCTCTGTTTGTTGGGAACATTCTAGTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATGGTTCATCTCACATCTTCTCTGTTTGTTGGGAACATTCTAGTT  1125

seq1  TTGAGTGACAAATAAAGGTGAGAAATAAGCGTCCAGGAAATGAATTC  1196
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGACAAATAAAGGTGAGAAATAAGCGTCCAGGAAATGAATTC  1172