BAC Information

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BAC

Clone NameB6Ng01-081F02
Chromosome19 (Build37)
Map Location 22,994,889 - 22,995,440
singlet/doubletsinglet
Overlap geneTrpm3
Upstream geneEG433229, EG433230
Downstream geneKlf9, Smc5, Mamdc2, 1700028P14Rik, LOC670565, LOC226030, EG625193, Ptar1, Apba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081F02.bB6Ng01-081F02.g
ACCDH896208DH896209
length1,030439
definitionDH896208|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F02, 5' end.DH896209|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagaatggttgtatcagtttgcaatcctatgagcaatggaggac
cgttcctctttctctacatcctcaccagcatgtgctgtcacttgagtttt
tgatcttagccactctgactggtatgaggtggaatctcagggtcattttg
atctacatttctctgatgactaaggactttgaacatttctttaggtgctt
cttagccatctgtgattttctgttgtgaattctctgtttagctttgtacc
ccatttttattttttatatatatttttattgaatttttccttatttacat
ttcaaatgtttccccttttcaggtctccccttcagaaacgcccatccaat
ttcttcctcccgtgcctctatgagggtgctccccacccatccactcctat
cctcccaccctggtaaaatgttctgtagatatctgttaaatccatttggg
tcataacttctgttaatatcactgtgtccctgtttagtttctctgtcaat
ggcctgtccattggtgagagtggggtattgaagtctctcactattaatgt
atgagattcaatgtgtgttttgagctttagtaaagtttcttttttgaatg
tgagtgaccttgcatttgagacacagatgtttcagaattgagactttctc
ttggtagatttttcctttgatgaatatgatgtgtccttccctcgtttgat
aacttttggttgaaagtctattttatcagatatcacaatgataactccag
cttgtttcttgggaccatttgcttgggaaactttttttttcagcctttta
tccgaggtagttttctgtcttttgtcactgaagtgtgtttcttgtatgca
gcaaaatgctggatcctgtttaagtatccagtctgttagcctgtgttttt
tattggagaatttattccattgatgtggagaaatattaaagacagatgga
tgttcagttcctattatttttgttgctgaagtggtcttattgggtgtgtg
attccttctttatgttgtatgaaatgttaa
acacccagacatttaataaatcctgaattaacaatgatctctatagtaaa
tcttcagtgacagcaaactggagcatctgtgatgctactcgttggtttca
gcagcatgtgggattgaggtagagatgacaccaaagagacccttatgata
gggtggctatgtcagggatgtacttagagatgtgggcatccggctctggt
gatatctctagagtttctggggaagaagctcgtgaactcagcaccctcac
ctactcctgcctccagcttcacactgatgctggccacctcagctccgtct
ttgtgggaaaattctagaagctaaatatagtctagaatgttgaagccctc
agccatttgtactgaagtacattagcttgccccttgaggttgttcttttc
ccttccttccttccttccttccttccttccttccatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_22994889_22995440
seq2: B6Ng01-081F02.g_71_515 (reverse)

seq1  TATATGCACAAAATACCATATAATAAATAAATAAATAAATAAATAAATAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAAATAAGAGAGAGAGAGAAGGAAGGAGGGAAGGAAGGAAGGAAGGAA  100
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAA  150
              | | ||||||||||||||||||||||||||||||||||||||
seq2  -------TATATGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAA  43

seq1  AGAACAACCTCAAGGGGCAAGCTAATGTACTTCAGTACAAATGGCTGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAACCTCAAGGGGCAAGCTAATGTACTTCAGTACAAATGGCTGAGG  93

seq1  GCTTCAACATTCTAGACTATATTTAGCTTCTAGAATTTTCCCACAAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAACATTCTAGACTATATTTAGCTTCTAGAATTTTCCCACAAAGAC  143

seq1  GGAGCTGAGGTGGCCAGCATCAGTGTGAAGCTGGAGGCAGGAGTAGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAGGTGGCCAGCATCAGTGTGAAGCTGGAGGCAGGAGTAGGTGA  193

seq1  GGGTGCTGAGTTCACGAGCTTCTTCCCCAGAAACTCTAGAGATATCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGAGTTCACGAGCTTCTTCCCCAGAAACTCTAGAGATATCACCA  243

seq1  GAGCCGGATGCCCACATCTCTAAGTACATCCCTGACATAGCCACCCTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGGATGCCCACATCTCTAAGTACATCCCTGACATAGCCACCCTATC  293

seq1  ATAAGGGTCTCTTTGGTGTCATCTCTACCTCAATCCCACATGCTGCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGTCTCTTTGGTGTCATCTCTACCTCAATCCCACATGCTGCTGAA  343

seq1  ACCAACGAGTAGCATCACAGATGCTCCAGTTTGCTGTCACTGAAGATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACGAGTAGCATCACAGATGCTCCAGTTTGCTGTCACTGAAGATTTA  393

seq1  CTATAGAGATCATTGTTAATTCAGGATTTATTAAATGTCTGGGTGTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAGATCATTGTTAATTCAGGATTTATTAAATGTCTGGGTGTGAAT  443

seq1  TC  552
      ||
seq2  TC  445