BAC Information

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BAC

Clone NameB6Ng01-083A10
Chromosome19 (Build37)
Map Location 49,779,132 - 49,780,128
singlet/doubletsinglet
Overlap genenone
Upstream geneSorcs3, LOC100042896
Downstream geneLOC629448, Siah1-ps1, EG433251, Sorcs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083A10.bB6Ng01-083A10.g
ACCDH897402DH897403
length1,249995
definitionDH897402|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A10, 5' end.DH897403|Mus musculus domesticus DNA, BAC clone: B6Ng01-083A10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaaagatggcgacatcataagttcctggtagctttataatga
gactcagtctcaaagaaagaaaaaaaaatagagaaagagttgatatatat
ttattgagtctacatttttggagattgggagtccaagatcagacaacctt
ataggttgaaactctggtgagggtttcatggaaaatgtcatcatggtata
atgtcctgtgagagattggcatcatgctgataaacaaaagctacaaaggc
taagctcaggagtttataatcaagtatcataaaagaactactcaagatgt
caccagaactattttatctaatatcttctttagacatcctctaagagtta
aaggtataattagttcttttggttttagcgcttttaggtgtgttaacttg
ataggtttttcatgtagaaacttagtgctgtgaacttgcctcttggaacc
aacttcattgtgtctcctaaatttggctatgctatatgtttcttttcatt
gaattctagaaaatctttagtttatttctttacctatttttcactcagta
gagagcggtttaatttccataagtttataagttttctgttgtttctcttg
ttgatgatacctagctctaattcatggtggtctgataggatgcaaggagt
tattttaagtttcttatattcgttgagtcttgttttgggttaattttgaa
gaaagttccatgaggtatagagaataacgtatagtcttttgtgtttgagt
gcaaggttctgaaaatatctgttaggtgtattttttttatgatgtctgct
aactctaatatttctctgtttagcttttgtatggatggcctgcccatcag
tgagagttgggtatcattgtctaccactattagagtgtgagggtcaatat
gtgacttaagctctagtagtgttcctattataaacttagtggccttatat
ttggggcatagatattaagaattgaaatgtcatctggtggatttttttct
tgaggagtatgtagggtccatctctatttcttttattcacttggttgatg
tctatcttggtataattaaatggctatgccagtttgctcttagtccattt
cttggaaattttttccaccttttacccgggggaaggtgcgcgtgccaatt
ggtgatatgagaaggattctgagccgtgtagatcatccgttataacacct
tgagcctgcctttttttgtaaaattgtagcacatgtatattgtgacgat
gaattcttcacaccagacagcgaggtgctcattattcttaggtgcacata
cagtattcatcaagagctagtttctgattcataaaagaagcctaagcaat
ataaaagaagttgtcagcatacaaaaacatgttctctaaccataattgaa
ttaactatgaatcaatagcacaaagataaaaggtaaatcttccaatccca
gctaattaaacaacactctcttaaatgggccatggaaacttttgagtagt
ctatgagatttaaaagagaaaggttagagataaagtagaaagttgttttt
accaggaataaagtgaagatacaatcataaaataagaagaaaatgaagat
agagtcatactctatggaaagctgcaagcaacctgtggtggaaagtgcac
acatgggaacacacactttattatgaaagaacatgaaagctctacagtaa
aaatagagaaggagttttggaagagttctgttttctacatatttagagaa
acattacattgctgagccatcccagtcctgagaattttccccacagaaat
gaagaatgtccatacaaaactacctataggtgcatgtagatatacactat
caactggcagtgcctaattatgcatgtccacacactgagccaataatgac
caataaaagcaatggattgctaacaaatgaagcagtgaggatgagtctca
aatatcacacaaaacaaagaggccagactccccaataaaatgaaagtgag
catttggtgtccttcctaaaattctcaaattagggacagttcagtatgat
ttaaccacaaagactcatgctatttatcagatgctgttgtgttggaattc
tgccccatggagactgttctaaaaggtgatggaaaataaagaaaggaaaa
aagtgctccctacatatgcatgtgcatatgtgtgtatgtgtgtgcatgta
tgtttgtgtgtgcatgtgtgtatgtgtgtgcatatgtatgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_49779132_49780128
seq2: B6Ng01-083A10.g_69_1063

seq1  GAATTCTTCACACCAGACAGCGAGGTGCTCATTATTCTTAGGTGCACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACACCAGACAGCGAGGTGCTCATTATTCTTAGGTGCACATA  50

seq1  CAGTATTCATCAAGAGCTAGTTTCTGATTCATAAAAGAAGCCTAAGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTCATCAAGAGCTAGTTTCTGATTCATAAAAGAAGCCTAAGCAAT  100

seq1  ATAAAAGAAGTTGTCAGCATACAAAAACATGTTCTCTAACCATAATTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGAAGTTGTCAGCATACAAAAACATGTTCTCTAACCATAATTGAA  150

seq1  TTAACTATGAATCAATAGCACAAAGATAAAAGGTAAATCTTCCAATCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTATGAATCAATAGCACAAAGATAAAAGGTAAATCTTCCAATCCCA  200

seq1  GCTAATTAAACAACACTCTCTTAAATGGGCCATGGAAACTTTTGAGTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTAAACAACACTCTCTTAAATGGGCCATGGAAACTTTTGAGTAGT  250

seq1  CTATGAGATTTAAAAGAGAAAGGTTAGAGATAAAGTAGAAAGTTGTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGATTTAAAAGAGAAAGGTTAGAGATAAAGTAGAAAGTTGTTTTT  300

seq1  ACCAGGAATAAAGTGAAGATACAATCATAAAATAAGAAGAAAATGAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAATAAAGTGAAGATACAATCATAAAATAAGAAGAAAATGAAGAT  350

seq1  AGAGTCATACTCTATGGAAAGCTGCAAGCAACCTGTGGTGGAAAGTGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCATACTCTATGGAAAGCTGCAAGCAACCTGTGGTGGAAAGTGCAC  400

seq1  ACATGGGAACACACACTTTATTATGAAAGAACATGAAAGCTCTACAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGAACACACACTTTATTATGAAAGAACATGAAAGCTCTACAGTAA  450

seq1  AAATAGAGAAGGAGTTTTGGAAGAGTTCTGTTTTCTACATATTTAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAGAAGGAGTTTTGGAAGAGTTCTGTTTTCTACATATTTAGAGAA  500

seq1  ACATTACATTGCTGAGCCATCCCAGTCCTGAGAATTTTCCCCACAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACATTGCTGAGCCATCCCAGTCCTGAGAATTTTCCCCACAGAAAT  550

seq1  GAAGAATGTCCATACAAAACTACCTATAGGTGCATGTAGATATACACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGTCCATACAAAACTACCTATAGGTGCATGTAGATATACACTAT  600

seq1  CAACTGGCAGTGCCTAATTATGCATGTCCACACACTGAGCCAATAATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGCAGTGCCTAATTATGCATGTCCACACACTGAGCCAATAATGAC  650

seq1  CAATAAAAGCAATGGATTGCTAACAAATGAAGCAGTGAGGATGAGTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAAGCAATGGATTGCTAACAAATGAAGCAGTGAGGATGAGTCTCA  700

seq1  AATATCACACAAAACAAAGAGGCCAGACTCCCCAATAAAATGAAAGTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCACACAAAACAAAGAGGCCAGACTCCCCAATAAAATGAAAGTGAG  750

seq1  CATTTGGTGTCCTTCCTAAAATTCTCAAATTAGGGACAGTTCAGTATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGTGTCCTTCCTAAAATTCTCAAATTAGGGACAGTTCAGTATGAT  800

seq1  TTAACCACAAAGACTCATGCTATTTATCAGATGCTGTTGTGTTGGAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCACAAAGACTCATGCTATTTATCAGATGCTGTTGTGTTGGAATTC  850

seq1  TGCCCCATGGAGACTGTTCTAAAAGGTGATGGAAAATAAAGAAAGGAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCATGGAGACTGTTCTAAAAGGTGATGGAAAATAAAGAAAGGAAAA  900

seq1  AAAGGTGCTCCCTACATATGCATGTGCATATGTGTGTATGTGTGTGCATG  950
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA--GTGCTCCCTACATATGCATGTGCATATGTGTGTATGTGTGTGCATG  948

seq1  TATGTTTGTGTGTGCATGTGTGTATGTGTGTGCATATGTATGTGTGT  997
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGTGTGTGCATGTGTGTATGTGTGTGCATATGTATGTGTGT  995