BAC Information

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BAC

Clone NameB6Ng01-087E11
Chromosome19 (Build37)
Map Location 32,176,237 - 32,391,856
singlet/doubletdoublet
Overlap geneAsah2, Sgms1
Upstream genePrkg1, 8430431K14Rik, 1810073H04Rik, EG668042
Downstream gene2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087E11.bB6Ng01-087E11.g
ACCDH900451DH900452
length1,193857
definitionDH900451|Mus musculus domesticus DNA, BAC clone: B6Ng01-087E11, 5' end.DH900452|Mus musculus domesticus DNA, BAC clone: B6Ng01-087E11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,176,237 - 32,177,437)(32,391,002 - 32,391,856)
sequence
gaattccaggttgggtcaacatgcacagaccaatcaaggcaatacaaaat
atatagaggctgaaggctagaaaatacacaattaatagatgcagatatag
cttttggcaaactccaacatctctccatgataaaaataccagaatatgta
gggatataaagaacatttgtccacataaagactatacaggatcagcctgt
tagctgacattatataataaatacgtaaaaaattgtttcctaaaatcaaa
aacaagagtctctctctctcacccccccacctcgtcttcgccctctctct
ctgtgcatgtatgtgtgtgtgtgcacgtatgtgtgtgcacatatgtgtgt
atgtgtgtattcttattcaatatggtgtccgagttgggggaaacttttag
aaaagttgtagacctaaacgtcgattgccttgcattttacctgcaccatg
cattccgggaagtttgcaaatatctataccgtcatcggtgtgcacagtgc
ttctagactgtaccttcacaccacatcgggaccctgaaaaactttaagct
aaaaccttgtattccttgaaattccattcagttcaagtctttgaagatta
tttctagtctgttttgagtttcagatgcgtttccacgaacaaaataaaag
gttcgtgaagtaataccgatacccagctgagcacgtagagactgattaga
agtcatgacatgctgaaggatgtttccggtcacactgtgtgtgctggggc
taaagtagtcaggttgtaggagaggagaaagcattcggtcttagatgatg
cctccctccctccctcgggcttccgatgaattatagaagtttgctctccg
agtctggggttttaaatcgtatcttccaaaatgggcaggaaaatgtgttt
ctgcctcctgcatctaccaattcaccaacaacttcaaatatttacctcta
agtatagatttccagtagagatagcaaaaactaccgtttgaatcccactg
cgatcgtgacatcaaatgacctgacgctgcagcacctagaatcagatcag
tttaaagacaatcctcagcatcggagaatgcagcttaatgaggatggaga
aatctgcacgcctcaccctggcaccctgggcctcttattcacgaatgaat
gcaggctatagacactgcccttctccaagggaccttgtttgca
gaattctctgtgatgttaatagctaaaagttgaccaaattataataaccc
accatggtggcaagcaaagtgagtcactaggccaaagggttacttagtca
ctatacaaaccaaccaatgcctgaaagggttacttgctacactaatgaaa
accctgttgctcaaatctgtcccttacaaaggtataaaaagtgtgttctt
tctttgttctgggtctctcctctggcctgcttgctgagaggggagtcccc
aacatgttggatcaataaaaatcctcatgcgttttgcagcgatggcagtc
tctgtggtctttgtgagtaaggttcttttgacaaactccaacaccacatc
ctatccagaggcttctagattgtatttctcctttttctttttggtgatgg
ccttggcagtgttgaggagtactggtcagatgtgtttatactgacctaca
attaggattggcctcagaattttctgattagattgttttttgcaggatca
gggaaatgagatattcttctcattatactttttgtttgtttgtttttgtt
tttcaaggtcaggtttctctgtgtagccctggctgtccttgaactttctc
tgtccaccaggctggcctttaaggctcattgtacttttttcaggtggaga
aagcaccgtggtttcttttctctctgctggtgtgacctgggttacctcag
aaaggctaagacagtgacggcaagcttcttgctgtcacgtagcccacaca
ggaggaattgtgctcagatgaaatatctaccagtgggcatgtctgtgcag
aactttttagactattaagttaaggtagcatgatccaccctaatatgtga
gaggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32176237_32177437
seq2: B6Ng01-087E11.b_49_1241

seq1  GAATTCCAGGTTGGGTCAACATGCACAGACCAATCAAGGCAATACAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTTGGGTCAACATGCACAGACCAATCAAGGCAATACAAAAT  50

seq1  ATATAGAGGCTGAAGGCTAGAAAATACACAATTAATAGATGCAGATATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAGGCTGAAGGCTAGAAAATACACAATTAATAGATGCAGATATAG  100

seq1  CTTTTGGCAAACTCCAACATCTCTCCATGATAAAAATACCAGAATATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGCAAACTCCAACATCTCTCCATGATAAAAATACCAGAATATGTA  150

seq1  GGGATATAAAGAACATTTGTCCACATAAAGACTATACAGGATCAGCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATAAAGAACATTTGTCCACATAAAGACTATACAGGATCAGCCTGT  200

seq1  TAGCTGACATTATATAATAAATACGTAAAAAATTGTTTCCTAAAATCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGACATTATATAATAAATACGTAAAAAATTGTTTCCTAAAATCAAA  250

seq1  AACAAGAGTCTCTCTCTCTCACCCCCCCACCTCGTCTTCGCCCTCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAGTCTCTCTCTCTCACCCCCCCACCTCGTCTTCGCCCTCTCTCT  300

seq1  CTGTGCATGTATGTGTGTGTGTGCACGTATGTGTGTGCACATATGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATGTATGTGTGTGTGTGCACGTATGTGTGTGCACATATGTGTGT  350

seq1  ATGTGTGTATTCTTATTCAATATGGTGTCCGAGTTGGGGGAAACTTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTATTCTTATTCAATATGGTGTCCGAGTTGGGGGAAACTTTTAG  400

seq1  AAAAGTTGTAGACCTAAACGTCGATTGCCTTGCATTTTACCTGCACCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGTAGACCTAAACGTCGATTGCCTTGCATTTTACCTGCACCATG  450

seq1  CATTCCGGGAAGTTTGCAAATATCTATACCGTCATCGGTGTGCACAGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCGGGAAGTTTGCAAATATCTATACCGTCATCGGTGTGCACAGTGC  500

seq1  TTCTAGACTGTACCTTCACACCACATCGGGACCCTGAAAAACTTTAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGACTGTACCTTCACACCACATCGGGACCCTGAAAAACTTTAAGCT  550

seq1  AAAACCTTGTATTCCTTGAAATTCCATTCAGTTCAAGTCTTTGAAGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTGTATTCCTTGAAATTCCATTCAGTTCAAGTCTTTGAAGATTA  600

seq1  TTTCTAGTCTGTTTTGAGTTTCAGATGCGTTTCCACGAACAAAATAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTCTGTTTTGAGTTTCAGATGCGTTTCCACGAACAAAATAAAAG  650

seq1  GTTCGTGAAGTAATACCGATACCCAGCTGAGCACGTAGAGACTGATTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGTGAAGTAATACCGATACCCAGCTGAGCACGTAGAGACTGATTAGA  700

seq1  AGTCATGACATGCTGAAGGATGTTTCCGGTCACACTGTGTGTGCTGGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGACATGCTGAAGGATGTTTCCGGTCACACTGTGTGTGCTGGGGC  750

seq1  TAAAGTAGTCAGGTTGTAGGAGAGGAGAAAGCATTCGGTCTTAGATGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGTCAGGTTGTAGGAGAGGAGAAAGCATTCGGTCTTAGATGATG  800

seq1  CCTCCCTCCCTCCCTCGGGCTTCCGATGAATTATAGAAGTTTGCTCTCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTCCCTCGGGCTTCCGATGAATTATAGAAGTTTGCTCTCCG  850

seq1  AGTCTGGGGTTTTAAATCGTATCTTCCAAAATGGGCAGGAAAATGTGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGGGTTTTAAATCGTATCTTCCAAAATGGGCAGGAAAATGTGTTT  900

seq1  CTGCCTCCTGCATCTACCAATTCAACAAACAACTTCAAATATTTACCTCT  950
      ||||||||||||||||||||||| || |||||||||||||||||||||||
seq2  CTGCCTCCTGCATCTACCAATTC-ACCAACAACTTCAAATATTTACCTCT  949

seq1  AAGTATAGATTTCCAGTAGAGATAGCAAAAAACTACCGTTTGAATCCCAC  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAGTATAGATTTCCAGTAGAGATAGC-AAAAACTACCGTTTGAATCCCAC  998

seq1  TGCGATCGTGACATTCAAATGACCTGACGCTGCAGCA-CTAGAATTCAGA  1049
      ||||||||||||| ||||||||||||||||||||||| |||||| |||||
seq2  TGCGATCGTGACA-TCAAATGACCTGACGCTGCAGCACCTAGAA-TCAGA  1046

seq1  TCAGTTTAAAGACAATCCCCAGCATCCGAG-ATGCAGCTTAAATGAGGAT  1098
      |||||||||||||||||| ||||||| ||| ||||||||| |||||||||
seq2  TCAGTTTAAAGACAATCCTCAGCATCGGAGAATGCAGCTT-AATGAGGAT  1095

seq1  GGAGAAATCTGCAAACGCTCACCCCTGCACCCTGGG-CTCTTATTTTCAC  1147
      |||||||||||||  | |||||||  |||||||||| ||||||  |||||
seq2  GGAGAAATCTGCACGC-CTCACCCTGGCACCCTGGGCCTCTTA--TTCAC  1142

seq1  GATAGAATGCAGGCTAATAGACAACTGCCCTTTCTCCAAGGGACCTTGTT  1197
      ||  ||||||||||| |||||| ||||||| |||||||||||||||||||
seq2  GAATGAATGCAGGCT-ATAGAC-ACTGCCC-TTCTCCAAGGGACCTTGTT  1189

seq1  TGCA  1201
      ||||
seq2  TGCA  1193

seq1: chr19_32391002_32391856
seq2: B6Ng01-087E11.g_68_924 (reverse)

seq1  ATGCCTCTCACATA-TAGGGTGGATCATGCTACCTTAACTTAATAGTCTA  49
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTCACATATTAGGGTGGATCATGCTACCTTAACTTAATAGTCTA  50

seq1  AAAAGTTCTGCACAGACATGCCCACTGGTAGATATTTCATCTGAGCACAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCTGCACAGACATGCCCACTGGTAGATATTTCATCTGAGCACAA  100

seq1  TTCCTCCTGTGTGGGCTACGTGACAGCAAAGAAGCTTGCCGTCACTGTCT  149
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTCCTCCTGTGTGGGCTACGTGACAGC-AAGAAGCTTGCCGTCACTGTCT  149

seq1  TAGCC-TTCTGAGGTAACCCAGGTCACACCAGCAGAGAGAAAAGAAACCA  198
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTCTGAGGTAACCCAGGTCACACCAGCAGAGAGAAAAGAAACCA  199

seq1  CGGTGCTTTCTCCACCTG-AAAAAGTACAATGAGCCTTTAAGGCCAGCCT  247
      |||||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  CGGTGCTTTCTCCACCTGAAAAAAGTACAATGAGCCTTAAAGGCCAGCCT  249

seq1  GGTGGACAGAGAAAGTTCAAGGACAGCCAGGGCTACACAGAGAAACCTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGACAGAGAAAGTTCAAGGACAGCCAGGGCTACACAGAGAAACCTGA  299

seq1  CCTTGAAAAACAAAAACAAACAAACAAAAAGTATAATGAGAAGAATATCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAAAACAAAAACAAACAAACAAAAAGTATAATGAGAAGAATATCT  349

seq1  CATTTCCCTGATCCTGCAAAAAACAATCTAATCAGAAAATTCTGAGGCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCTGATCCTGCAAAAAACAATCTAATCAGAAAATTCTGAGGCCA  399

seq1  ATCCTAATTGTAGGTCAGTATAAACACATCTGACCAGTACTCCTCAACAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAATTGTAGGTCAGTATAAACACATCTGACCAGTACTCCTCAACAC  449

seq1  TGCCAAGGCCATCACCAAAAAGAAAAAGGAGAAATACAATCTAGAAGCCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGCCATCACCAAAAAGAAAAAGGAGAAATACAATCTAGAAGCCT  499

seq1  CTGGATAGGATGTGGTGTTGGAGTTTGTCAAAAGAACCTTACTCACAAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATAGGATGTGGTGTTGGAGTTTGTCAAAAGAACCTTACTCACAAAG  549

seq1  ACCACAGAGACTGCCATCGCTGCAAAACGCATGAGGATTTTTATTGATCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGAGACTGCCATCGCTGCAAAACGCATGAGGATTTTTATTGATCC  599

seq1  AACATGTTGGGGACTCCCCTCTCAGCAAGCAGGCCAGAGGAGAGACCCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTTGGGGACTCCCCTCTCAGCAAGCAGGCCAGAGGAGAGACCCAG  649

seq1  AACAAAGAAAGAACACACTTTTTATACCTTTGTAAGGGACAGATTTGAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGAAAGAACACACTTTTTATACCTTTGTAAGGGACAGATTTGAGC  699

seq1  AACAGGGTTTTCATTAGTGTAGCAAGTAACCCTTTCAGGCATTGGTTGGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGTTTTCATTAGTGTAGCAAGTAACCCTTTCAGGCATTGGTTGGT  749

seq1  TTGTATAGTGACTAAGTAACCCTTTGGCCTAGTGACTCACTTTGCTTGCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAGTGACTAAGTAACCCTTTGGCCTAGTGACTCACTTTGCTTGCC  799

seq1  ACCATGGTGGGTTATTATAATTTGGTCAACTTTTAGCTATTAACATCACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTGGGTTATTATAATTTGGTCAACTTTTAGCTATTAACATCACA  849

seq1  GAGAATTC  855
      ||||||||
seq2  GAGAATTC  857