BAC Information

Click to search

BAC

Clone NameB6Ng01-087K22
Chromosome19 (Build37)
Map Location 22,746,795 - 22,747,174
singlet/doubletsinglet
Overlap geneTrpm3
Upstream gene5730446C15Rik, Tmem2, EG433229, EG433230
Downstream geneKlf9, Smc5, Mamdc2, 1700028P14Rik, LOC670565, LOC226030
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087K22.bB6Ng01-087K22.g
ACCDH900738DH900739
length3801,196
definitionDH900738|Mus musculus domesticus DNA, BAC clone: B6Ng01-087K22, 5' end.DH900739|Mus musculus domesticus DNA, BAC clone: B6Ng01-087K22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tctgaaccggaagtaaaccagctgggcaagatgtgcccaccagtgtaata
gtgacatgactcttggggcagcaagcacacgcacactagatctgaggcct
gctctatgggagggaacccatgcctggtaccataagcccagctaacaatc
caagaatgaggagaccatagaactggaaggttgaacttacgaccatttcc
tcactaaatggccatagcatcaaactgccatctaaatatttatatctgta
gttagaggggaaaaaattctactatcattttcaagcagtaaagacttttt
ttgtaacaaattgtggtgaattcagaggctcatgaatgcctcagaattca
agaataagtggagggtgggatggggtgggg
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttctagggc
ttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttcttct
tggaggcactcagcgctatgagttccctcttagaaatgctttcattgtgt
cccatagtttggggtacgtgtggctcatttcataaactctaaaagtcttt
aatttcttcttattcctcctggacagttatcattggaagagtgttaatca
gtttcacgtgagtggcttccatattaagtgtaatgagatcagcttaggcc
atgtgtctgataggaaacaagggaccatatctaagtatatgttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_22746795_22747174
seq2: B6Ng01-087K22.b_54_433 (reverse)

seq1  CCCCACCCCATCCCACCCTCCACTTATTCTTGAATTCTGAGGCATTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCATCCCACCCTCCACTTATTCTTGAATTCTGAGGCATTCATG  50

seq1  AGCCTCTGAATTCACCACAATTTGTTACAAAAAAAGTCTTTACTGCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGAATTCACCACAATTTGTTACAAAAAAAGTCTTTACTGCTTGA  100

seq1  AAATGATAGTAGAATTTTTTCCCCTCTAACTACAGATATAAATATTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATAGTAGAATTTTTTCCCCTCTAACTACAGATATAAATATTTAGA  150

seq1  TGGCAGTTTGATGCTATGGCCATTTAGTGAGGAAATGGTCGTAAGTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTTTGATGCTATGGCCATTTAGTGAGGAAATGGTCGTAAGTTCAA  200

seq1  CCTTCCAGTTCTATGGTCTCCTCATTCTTGGATTGTTAGCTGGGCTTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAGTTCTATGGTCTCCTCATTCTTGGATTGTTAGCTGGGCTTATG  250

seq1  GTACCAGGCATGGGTTCCCTCCCATAGAGCAGGCCTCAGATCTAGTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGGCATGGGTTCCCTCCCATAGAGCAGGCCTCAGATCTAGTGTGC  300

seq1  GTGTGCTTGCTGCCCCAAGAGTCATGTCACTATTACACTGGTGGGCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTTGCTGCCCCAAGAGTCATGTCACTATTACACTGGTGGGCACAT  350

seq1  CTTGCCCAGCTGGTTTACTTCCGGTTCAGA  380
      ||||||||||||||||||||||||||||||
seq2  CTTGCCCAGCTGGTTTACTTCCGGTTCAGA  380