BAC Information

Click to search

BAC

Clone NameB6Ng01-090P23
Chromosome19 (Build37)
Map Location 7,406,598 - 7,406,814
singlet/doubletsinglet
Overlap geneMark2
Upstream geneRasgrp2, Nrxn2, Slc22a12, LOC629372, Rps6ka4, Ccdc88, Prdx5, 0610038D11Rik, Esrra, 1700019N12Rik, Kcnk4, Gpr137, Bad, Plcb3, Ppp1r14b, Fkbp2, Vegfb, Dnajc4, Nudt22, Trpt1, BC032204, Stip1, D930010J01Rik, Flrt1, Otub1, Cox8a, Nat11, Rcor2
Downstream geneAI846148, EG665419, 2700081O15Rik, Rtn3, LOC100039547, 5730596K20Rik, Hrasls3, Lgals12, Hrasls5, LOC433217, Slc22a19, LOC666543, BC014805, LOC632903, AB056442, LOC620946, LOC623030, 9530053H05Rik, EG434674, LOC100039705, D630002G06Rik, EG633120, EG666601, LOC100039749
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090P23.bB6Ng01-090P23.g
ACCDH903149DH903150
length1,007217
definitionDH903149|Mus musculus domesticus DNA, BAC clone: B6Ng01-090P23, 5' end.DH903150|Mus musculus domesticus DNA, BAC clone: B6Ng01-090P23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgcataatattttgtatatttagtacatttgcagggagtgttt
tgtgtgtatgtctgtatttatatgggtgcatgtatgtcccagagcatatg
gagatcagaggacaacagttatctagtatcatgtgagctctaatgttaaa
tttggattgtcaagcacctttactgctgagcagttttggtatctctctgt
ctcactctttttttttttttttttttttttttttgagacaaggtttctct
gtgtacccttggctgtcctgaaccttgctttgtagaccaggctagcctca
aactcagaaagatggactgcctctgcctccagtgtgctgagattagtgtg
tgccaccaccatccagtgagaattttttttaatatattttactttttgct
gaaaagatcatgttttcttaagtaccaaaagcaaaatcttccttctatcc
caaacaacaacttctcctctttcactttttttttttttaaatggggtctc
atgtaactccagtggcctggaactctatatagatcagactaacctgaact
tacaaagatctgcctgcctttgcctctgcctcttgagcactgggattcaa
aagtatgttccatcattcatggtttgtgtgagagagacgcagagacaaag
gtgccagaatctcatgtatcccagtcaagtgctggggttacagatcttca
tacaagtttcacctcagacttttttttttttttaagatggattttattta
tttaatgtctttgagtacacaactgtagactggaaaaaatagtgtgagcc
tccatcttagtggttggggaaatggaatttaagacctctgcttactctgg
tcaactctgctcactctggcccaaagattgatttataagtacactgaagc
tgtcttccagacagcactgaagaatggttgtaaccaccatgttgctgctg
gatttgaactcaggacttctgagagcgtatctttacgcggagcaacttac
agactac
actgtggagtaggctggcctccaactcaggagatctacttgcctctgcca
cctacgattaaaggtgtgcaccactactgctggcatgttttctaccaatt
ctaacttgttttgttttttaaattagctatctgaaagaaataaagtgctg
cttgacagcttcgtgtatgtttttttaaacgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_7406598_7406814
seq2: B6Ng01-090P23.g_78_294

seq1  ACTGTGGAGTAGGCTGGCCTCCAACTCAGGAGATCTACTTGCCTCTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGAGTAGGCTGGCCTCCAACTCAGGAGATCTACTTGCCTCTGCCA  50

seq1  CCTACGATTAAAGGTGTGCACCACTACTGCTGGCATGTTTTCTACCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACGATTAAAGGTGTGCACCACTACTGCTGGCATGTTTTCTACCAATT  100

seq1  CTAACTTGTTTTGTTTTTTAAATTAGCTATCTGAAAGAAATAAAGTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTGTTTTGTTTTTTAAATTAGCTATCTGAAAGAAATAAAGTGCTG  150

seq1  CTTGACAGCTTCGTGTATGTTTTTTTAAACGTGTGTGTGTGTGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAGCTTCGTGTATGTTTTTTTAAACGTGTGTGTGTGTGTGTGTGT  200

seq1  GTGTGTGTGTGTGTGTG  217
      |||||||||||||||||
seq2  GTGTGTGTGTGTGTGTG  217