BAC Information

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BAC

Clone NameB6Ng01-091C12
Chromosome4 (Build37)19 (Build37)
Map Location 7,940,781 - 7,941,95531,269,086 - 31,269,119
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC666700
Downstream geneCar8, LOC100039494, LOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091C12.bB6Ng01-091C12.g
ACCDH903263DH903264
length1,157823
definitionDH903263|Mus musculus domesticus DNA, BAC clone: B6Ng01-091C12, 5' end.DH903264|Mus musculus domesticus DNA, BAC clone: B6Ng01-091C12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(7,940,781 - 7,941,955)(31,269,086 - 31,269,119)
sequence
gaattcctaaatttttcatttccagaattctctcagttttggttttattt
attgatctttttgccatgttttgttcttgaacagttttatgtattttctt
ccattgtttaatttttcctggatttctttaaggaatttattcatttcctc
tttaagggcttctatcatcttcataaagactatgctaaggtctttttcct
gtacttagtttatgagctatcttacccaacagtatctgagaagcttgctc
cattccaagattattctagacaaacattgcacctcagctaacattaccaa
caattctgtgaagagcactgttccttctgtctttcagatgaggaagtcaa
aacatagggacatatgacttgcccacaacattcagtttaaacttggcaga
atcccttctttaattcatgtctatattcaacgaagacctttatctttcat
caggtcaataaggtgtttgcatatttgatatgtgaatattttctctaaaa
tctggaaaaatgcttgtaggattctagaaatttatatttatagcatcaca
ttaagggtggttcttaccaccagtttgttgttgttgttgttgttgctttg
gttttttgcaatgcagtaaatagtttccatgctagttcttcactactttt
ttccagtagtttggattatttttctcttatctgattgaaataataattgg
tgatatttaaataattttcttgggctggagagatggctcagtggttaaga
gcactgactgctcttccagaggttctgagttcaattcccagcaaccacat
tgtggctcataaccatctgcaatggtatctgatgccttcttctgatgggt
ctgaagagaatgacagtgtactcacatacagaaaataaataaattttaag
aaagataattttctcaactcatatcacttaccaaagttaaatcagatcag
atagcaatttgaacagacctatgactctagtgagatagaagccatcatta
aatgtttcttactgaaaagaagcccagatccagatggttttagtgcaaaa
ttctacagacttcaagaaagttacttcattgctcttccaattattctaca
gaattctaccgaaatcaagaaaaggtattcatgctctttcatatatctac
aaattct
gaattctcggtttaattctacaccacattttttgattgggttgttcagct
ttttggtgattaacttcttgagttctttatatattttggatattaaccct
ctatcagatgtgggattagtgaagattttttcccaatcagtaggttgtcg
atttgtcttattgactatgttctttgcctgacagaaattttccagtttca
tgaggttccacttatcaattcttgatcttagatcatgggtcattggagtt
ctgtttaagaaatttctcctgtgccaataagttgaaggctctttcccact
ttctgttctattagattcagtgtatctggttttatgttgaggtgaggtct
ttgatccacttggacttgagctttgtacaaggtgacaagtatgggtctaa
aacatataaacagcatcagttagagcagcactgtttgttgaagattccac
tatgttcagagtggccttatctgtgatatccagaagctggaaacaaccca
gatgtccaacagaagaatggacacagaaaatgtggttcatttatacaaag
gaatactcagctattaagaatgaggtcattctgcattttgcaggcaaatg
gatggaactagaaaatatcatcctgagtgaggtaactcagacccaaaagg
acatgcatggtatgtactcactaataagtggatattagcccctctccccc
ccaaaaatggtgcagaatacccaagatacattccacagaactcacaaaga
ttaacaagctgaagtgcccaagtgaggatgcctcagtcccacttgggaga
gagaagaaagcaatcacaagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7940781_7941955
seq2: B6Ng01-091C12.b_42_1198

seq1  GAATTCCTAAATTTTTCATTTCCAGAATTCTCTCAGTTTTGGTTTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAATTTTTCATTTCCAGAATTCTCTCAGTTTTGGTTTTATTT  50

seq1  ATTGATCTTTTTGCCATGTTTTGTTCTTGAACAGTTTTATGTATTTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCTTTTTGCCATGTTTTGTTCTTGAACAGTTTTATGTATTTTCTT  100

seq1  CCATTGTTTAATTTTTCCTGGATTTCTTTAAGGAATTTATTCATTTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTTTAATTTTTCCTGGATTTCTTTAAGGAATTTATTCATTTCCTC  150

seq1  TTTAAGGGCTTCTATCATCTTCATAAAGACTATGCTAAGGTCTTTTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGGCTTCTATCATCTTCATAAAGACTATGCTAAGGTCTTTTTCCT  200

seq1  GTACTTAGTTTATGAGCTATCTTACCCAACAGTATCTGAGAAGCTTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTAGTTTATGAGCTATCTTACCCAACAGTATCTGAGAAGCTTGCTC  250

seq1  CATTCCAAGATTATTCTAGACAAACATTGCACCTCAGCTAACATTACCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAGATTATTCTAGACAAACATTGCACCTCAGCTAACATTACCAA  300

seq1  CAATTCTGTGAAGAGCACTGTTCCTTCTGTCTTTCAGATGAGGAAGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGTGAAGAGCACTGTTCCTTCTGTCTTTCAGATGAGGAAGTCAA  350

seq1  AACATAGGGACATATGACTTGCCCACAACATTCAGTTTAAACTTGGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGGACATATGACTTGCCCACAACATTCAGTTTAAACTTGGCAGA  400

seq1  ATCCCTTCTTTAATTCATGTCTATATTCAACGAAGACCTTTATCTTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTCTTTAATTCATGTCTATATTCAACGAAGACCTTTATCTTTCAT  450

seq1  CAGGTCAATAAGGTGTTTGCATATTTGATATGTGAATATTTTCTCTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAATAAGGTGTTTGCATATTTGATATGTGAATATTTTCTCTAAAA  500

seq1  TCTGGAAAAATGCTTGTAGGATTCTAGAAATTTATATTTATAGCATCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAAAATGCTTGTAGGATTCTAGAAATTTATATTTATAGCATCACA  550

seq1  TTAAGGGTGGTTCTTACCACCAGTTTGTTGTTGTTGTTGTTGTTGCTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGTGGTTCTTACCACCAGTTTGTTGTTGTTGTTGTTGTTGCTTTG  600

seq1  GTTTTTTGCAATGCAGTAAATAGTTTCCATGCTAGTTCTTCACTACTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGCAATGCAGTAAATAGTTTCCATGCTAGTTCTTCACTACTTTT  650

seq1  TTCCAGTAGTTTGGATTATTTTTCTCTTATCTGATTGAAATAATAATTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTAGTTTGGATTATTTTTCTCTTATCTGATTGAAATAATAATTGG  700

seq1  TGATATTTAAATAATTTTCTTGGGCTGGAGAGATGGCTCAGTGGTTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTAAATAATTTTCTTGGGCTGGAGAGATGGCTCAGTGGTTAAGA  750

seq1  GCACTGACTGCTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGACTGCTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACAT  800

seq1  TGTGGCTCATAACCATCTGCAATGGTATCTGATGCCTTCTTCTGATGGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTCATAACCATCTGCAATGGTATCTGATGCCTTCTTCTGATGGGT  850

seq1  CTGAAGAGAATGACAGTGTACTCACATACAGAAAATAAATAAATTTTAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGAATGACAGTGTACTCACATACAGAAAATAAATAAATTTTAAG  900

seq1  AAAGATAATTTTCTCAACTCATATCACTTACCAAAGTTAAATCAAGATCA  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAGATAATTTTCTCAACTCATATCACTTACCAAAGTTAAATC-AGATCA  949

seq1  GATAAGCAATTTGAACAGACCTATGAACTCTAGTGAGATAGAAGCCATCA  1000
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAT-AGCAATTTGAACAGACCTATG-ACTCTAGTGAGATAGAAGCCATCA  997

seq1  TTAAATGTTTCTTAACTGAAAAAGAAGCCCAGATCCAGATGGTTTTAGTG  1050
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  TTAAATGTTTCTT-ACTG-AAAAGAAGCCCAGATCCAGATGGTTTTAGTG  1045

seq1  CAAAATTCTACCAGACTTTCAAAGAAAAGTTAACTCCAATGCTCTTCAAA  1100
      |||||||||| ||||| |||||   |||||| ||| || |||||||| ||
seq2  CAAAATTCTA-CAGAC-TTCAA--GAAAGTT-ACTTCATTGCTCTTCCAA  1090

seq1  TTATTCTACAAGATTCTACCAGACATTCAAAGAAAAGTTAATTCCAATGC  1150
      ||||||||||  |||||||| || ||   |||||||| | ||||  ||||
seq2  TTATTCTACAGAATTCTACC-GAAAT--CAAGAAAAGGT-ATTC--ATGC  1134

seq1  TCTTCAAATTATTCTACAAAATTCT  1175
      ||||  |  || ||||| |||||||
seq2  TCTTTCATATA-TCTAC-AAATTCT  1157

seq1: chr19_31269086_31269119
seq2: B6Ng01-091C12.g_856_889 (reverse)

seq1  CCACTTGTGATTGCTTTCTTCTCCCTCCCAAGTG  34
      ||||||||||||||||||||||| ||||||||||
seq2  CCACTTGTGATTGCTTTCTTCTCTCTCCCAAGTG  34