BAC Information

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BAC

Clone NameB6Ng01-094G08
Chromosome19 (Build37)
Map Location 4,321,101 - 4,437,385
singlet/doubletdoublet
Overlap geneFbxl11, LOC100043628, Rhod
Upstream geneLOC665826, Cpt1a, Mtl5, Gal, Saps3, LOC100043581, Lrp5, 1810055G02Rik, LOC100039289, Suv420h1, Chka, Tcirg1, Ndufs8, Aldh3b1, Unc93b1, LOC100039337, 1700055N04Rik, Aldh3b2, Acy3, Tbx10, Nudt8, Doc2g, Ndufv1, Gstp1, Gstp2, BC021614, Cabp2, Cdk2ap2, Pitpnm1, Aip, Tmem134, Cabp4, Gpr152, Coro1b, Ptprcap, Rps6kb2, AI790298, Tbc1d10c, Ppp1ca, Rad9, Clcf1, Pold4, Ssh3, Ankrd13d, Adrbk1
Downstream geneSyt12, 2010003K11Rik, Pcx, Lrfn4, Rce1, Gm960, Spnb3, Rbm4b, Rbm4, Rbm14, Ccs, Ccdc87, Ctsf, Actn3, Zdhhc24, Bbs1, Dpp3, Peli3, Mrpl11, Npas4, Slc29a2, B3gnt1, Brms1, Rin1, Cd248, Tmem151, Yif1a, Cnih2, Rab1b, Klc2, LOC383424, Pacs1, Sf3b2, Gal3st3, EG631868, Catsper1, Cst6, Banf1, 2010003J03Rik, Sart1, Tsga10ip, EG622178, Drap1, AI837181, LOC383425
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G08.bB6Ng01-094G08.g
ACCDH905631DH905632
length1,0381,147
definitionDH905631|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G08, 5' end.DH905632|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,436,343 - 4,437,385)(4,321,101 - 4,322,269)
sequence
gaattcattctatagaccaggctggcctcaaacacagagatttgcctgtc
tctgcctgggattaccggtgtgtgctgcagctgtccggctggtttgtctt
gctcggtcttgggtaggccaggatgacctcagattcgatatgtagccaaa
gatgcatatatatatatgatttatttattttatttatatgggtacattgc
agctgtcttcagatacaccaaagaaagcatcgggtcccattacagatagt
tgtgagccaccatgaggttgctgggaattgaacttaagacctttggaaga
gcagtcagtgctcttaacccctgagccatctcaccagccccaagattgcc
ttctaacctccttgcctccacctcccaagtgcaactgcaggcagagcctt
ttgaggagaacatgagggtagctttgatctggcactcaggtcaccttgcc
cgcacccccccaccccaccccccacctccgcctcttcgcccagggcactc
catgacctctgaagccacgtccactgcatgggttcctgtcttccaggctt
tctgcctgcagcaaagggcaggggagagagtggttggagaagcctctgat
cttcactggctaacctccaacgtcacgttcacggctgaaggggcaaaata
gagcttatgggacagagagacctttttccccaaggagtctcagatggcac
tgagaacagagccattctgaatggcttacaagacagggacaggaggtggc
agagagcatccacctgcagaactatttcaatctgcagtcctcagactgct
ccagtttccacaggtgtcttacctggggaaccctgccctcattctgtcat
ggtcatctctctgtgaccttcaggagggcaggatcaggtctgagtcatct
ctgtcctgggtcaacccaagccaggccttgattcgcttgctgaacacaca
gaatagattaagcacttctgcctagagggtggggagcaaaacaccacaaa
gggttaaggtcacttccaaagtagaagagggcagtgac
gaattcaaatcctcagttaccagctgttctgagcaacacaaatgggtctc
tagtctactgggagagactatgttctaatctagtaaccaagtctaaagat
tttcatggtgtcaaggcatcaaagttataacgtttactttggtgttaaaa
ccaatagctggaacgccagatggcactgtcccacatctttaattccagca
ctcaggaggcagagacaggcagaaaacctagtctgtaaagtgagttccca
gacagacaaacacacaaacaaaacaaaaaatccaaatgctggaattgggt
gtgatggcacatattccattccagcattcagaaagaataggaaggctgat
ctttttgatttctaaagagttcaaggccacaaagtggccatttcaagaca
aagtacacatgcaggcacgtacaacaactgctgggcactttagggagata
gcttaagaaattaaaaaaaaaaaaaaaaaaaaaaagccggcgtggtggcg
catgcctttaatcccaacacttgggaggcagaggcaggtggatttctgag
ttcgaggccagcctgatctacaaagtgagttccaggacagccagagctat
acagagaaaccctgtctcaaaaaaaaaaaaaaaaaaaagtatttacattc
attgaaaagaccagaattcatatccccagaaaccacataatgccaggtgg
acatggcatcctgccagtaattacagcactgaaaggaagagcaggggacc
tcaacaagctggacagcaagactagccacatcagatacaagctctgtggt
gtctgacagaccctgcctcaacttttaaagtagatgaatgacccaaggtt
cctaataatcacatatccatcaatgcacacttgcctacattcacactcat
gaaaagaaggaaaataaagacccaggcactaaatttctgccacagcacta
gatgctgtgtagcttgtctttctgggaccttgaatgctgacgctaacaaa
ggagctgatggagcaaatctgactaaatttctttctttttaatgctcagc
aaagtacagcctggcagcagcactactcattcctttctgtattagtgcga
gtacatcagtatgctaccattggcagtacatggtccaacagcatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_4436343_4437385
seq2: B6Ng01-094G08.b_51_1088 (reverse)

seq1  GTCACTGCCCTGCCTCTTACTTTGGAATGTGACTTTATACCTTTTGTGGT  50
      |||||||||||  ||  |||||||||| ||||| ||| ||| ||||||||
seq2  GTCACTGCCCT--CTTCTACTTTGGAA-GTGACCTTA-ACCCTTTGTGGT  46

seq1  GTTCTTTGCT-CCCACCCTCTAGGCAGAAGTGCCTAATCTTATCTGTTGT  99
      ||  |||||| |||||||||||||||||||||| ||||||  |||| |||
seq2  GT--TTTGCTCCCCACCCTCTAGGCAGAAGTGCTTAATCTATTCTG-TGT  93

seq1  GTTCAGCAAGCGACTCAAGGCCTGGCTTGGGTTGACCCAGGACAGAGATG  149
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCAAGCGAATCAAGGCCTGGCTTGGGTTGACCCAGGACAGAGATG  143

seq1  ACTCAGACCTGGTCCTGCCCTCCTG-AGGTCACAGAGAGATGACCATGAC  198
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  ACTCAGACCTGATCCTGCCCTCCTGAAGGTCACAGAGAGATGACCATGAC  193

seq1  AGAATGAGGGCAGGGTTCCCCAGGTAGGACACCTGTGGAAACTGGAGCAG  248
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAATGAGGGCAGGGTTCCCCAGGTAAGACACCTGTGGAAACTGGAGCAG  243

seq1  TCTGAGGACTGCAGATTTGAATAGTTCTGCAGGTGGATGCTCTCTGCCAC  298
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  TCTGAGGACTGCAGATTGAAATAGTTCTGCAGGTGGATGCTCTCTGCCAC  293

seq1  CTCCTGTCCCTGTCTTGTAAGCCATTCAGAATGGCTCTGTTCTCAGTGCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCCCTGTCTTGTAAGCCATTCAGAATGGCTCTGTTCTCAGTGCC  343

seq1  ATCTGAGACTCCTTGGGGAAAAAGGTCTCTCTGTCCCATAAGCTCTATTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGACTCCTTGGGGAAAAAGGTCTCTCTGTCCCATAAGCTCTATTT  393

seq1  TGCCCCTTCAGCCGTGAACGTGACGTTGGAGGTTAGCCAGTGAAGATCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTTCAGCCGTGAACGTGACGTTGGAGGTTAGCCAGTGAAGATCAG  443

seq1  AGGCTTCTCCAACCACTCTCTCCCCTGCCCTTTGCTGCAGGCAGAAAGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCTCCAACCACTCTCTCCCCTGCCCTTTGCTGCAGGCAGAAAGCC  493

seq1  TGGAAGACAGGAACCCATGCAGTGGACGTGGCTTCAGAGGTCATGGAGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGACAGGAACCCATGCAGTGGACGTGGCTTCAGAGGTCATGGAGTG  543

seq1  CCCTGGGCGAAGAGGCGGAGGTGGGGGGTGGGGTGGGGGGGTGCGGGCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGCGAAGAGGCGGAGGTGGGGGGTGGGGTGGGGGGGTGCGGGCAA  593

seq1  GGTGACCTGAGTGCCAGATCAAAGCTACCCTCATGTTCTCCTCAAAAGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACCTGAGTGCCAGATCAAAGCTACCCTCATGTTCTCCTCAAAAGGC  643

seq1  TCTGCCTGCAGTTGCACTTGGGAGGTGGAGGCAAGGAGGTTAGAAGGCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCAGTTGCACTTGGGAGGTGGAGGCAAGGAGGTTAGAAGGCAA  693

seq1  TCTTGGGGCTGGTGAGATGGCTCAGGGGTTAAGAGCACTGACTGCTCTTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGGCTGGTGAGATGGCTCAGGGGTTAAGAGCACTGACTGCTCTTC  743

seq1  CAAAGGTCTTAAGTTCAATTCCCAGCAACCTCATGGTGGCTCACAACTAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCTTAAGTTCAATTCCCAGCAACCTCATGGTGGCTCACAACTAT  793

seq1  CTGTAATGGGACCCGATGCTTTCTTTGGTGTATCTGAAGACAGCTGCAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATGGGACCCGATGCTTTCTTTGGTGTATCTGAAGACAGCTGCAAT  843

seq1  GTACCCATATAAATAAAATAAATAAATCATATATATATATGCATCTTTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCATATAAATAAAATAAATAAATCATATATATATATGCATCTTTGG  893

seq1  CTACATATCGAATCTGAGGTCATCCTGGCCTACCCAAGACCGAGCAAGAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATCGAATCTGAGGTCATCCTGGCCTACCCAAGACCGAGCAAGAC  943

seq1  AAACCAGCCGGACAGCTGCAGCACACACCGGTAATCCCAGGCAGAGACAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGCCGGACAGCTGCAGCACACACCGGTAATCCCAGGCAGAGACAG  993

seq1  GCAAATCTCTGTGTTTGAGGCCAGCCTGGTCTATAGAATGAATTC  1043
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCTCTGTGTTTGAGGCCAGCCTGGTCTATAGAATGAATTC  1038

seq1: chr19_4321101_4322269
seq2: B6Ng01-094G08.g_68_1214

seq1  GAATTCAAATCCTCAGTTACCAGCTGTTCTGAGCAACACAAATGGGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCCTCAGTTACCAGCTGTTCTGAGCAACACAAATGGGTCTC  50

seq1  TAGTCTACTGGGAGAGACTATGTTCTAATCTAGTAACCAAGTCTAAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTACTGGGAGAGACTATGTTCTAATCTAGTAACCAAGTCTAAAGAT  100

seq1  TTTCATGGTGTCAAGGCATCAAAGTTATAACGTTTACTTTGGTGTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGGTGTCAAGGCATCAAAGTTATAACGTTTACTTTGGTGTTAAAA  150

seq1  CCAATAGCTGGAACGCCAGATGGCACTGTCCCACATCTTTAATTCCAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGCTGGAACGCCAGATGGCACTGTCCCACATCTTTAATTCCAGCA  200

seq1  CTCAGGAGGCAGAGACAGGCAGAAAACCTAGTCTGTAAAGTGAGTTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGGCAGAGACAGGCAGAAAACCTAGTCTGTAAAGTGAGTTCCCA  250

seq1  GACAGACAAACACACAAACAAAACAAAAAATCCAAATGCTGGAATTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAAACACACAAACAAAACAAAAAATCCAAATGCTGGAATTGGGT  300

seq1  GTGATGGCACATATTCCATTCCAGCATTCAGAAAGAATAGGAAGGCTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGCACATATTCCATTCCAGCATTCAGAAAGAATAGGAAGGCTGAT  350

seq1  CTTTTTGATTTCTAAAGAGTTCAAGGCCACAAAGTGGCCATTTCAAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGATTTCTAAAGAGTTCAAGGCCACAAAGTGGCCATTTCAAGACA  400

seq1  AAGTACACATGCAGGCACGTACAACAACTGCTGGGCACTTTAGGGAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACACATGCAGGCACGTACAACAACTGCTGGGCACTTTAGGGAGATA  450

seq1  GCTTAAGAAATTAAAAAAAAAAAAAAAAAAAAAAAGCCGGCGTGGTGGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGAAATTAAAAAAAAAAAAAAAAAAAAAAAGCCGGCGTGGTGGCG  500

seq1  CATGCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGTGGATTTCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGTGGATTTCTGAG  550

seq1  TTCGAGGCCAGCCTGATCTACAAAGTGAGTTCCAGGACAGCCAGAGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGGCCAGCCTGATCTACAAAGTGAGTTCCAGGACAGCCAGAGCTAT  600

seq1  ACAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAGTATTTACATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAGTATTTACATTC  650

seq1  ATTGAAAAGACCAGAATTCATATCCCCAGAAACCACATAATGCCAGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAAGACCAGAATTCATATCCCCAGAAACCACATAATGCCAGGTGG  700

seq1  ACATGGCATCCTGCCAGTAATTACAGCACTGAAAGGAAGAGCAGGGGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCATCCTGCCAGTAATTACAGCACTGAAAGGAAGAGCAGGGGACC  750

seq1  TCAACAAGCTGGACAGCAAGACTAGCCACATCAGATACAAGCTCTGTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAGCTGGACAGCAAGACTAGCCACATCAGATACAAGCTCTGTGGT  800

seq1  GTCTGACAGACCCTGCCTCAACTTTTAAAGTAGATGAATGACCCAAGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACAGACCCTGCCTCAACTTTTAAAGTAGATGAATGACCCAAGGTT  850

seq1  CCTAATAATCACATATCCATCAATGCACACTTGCCTACATTCACACTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAATCACATATCCATCAATGCACACTTGCCTACATTCACACTCAT  900

seq1  GAAAAGAAGGAAAATAAAGACCCAGGCACTAAATTTCTGCCACAGCACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAGGAAAATAAAGACCCAGGCACTAAATTTCTGCCACAGCACTA  950

seq1  GATGCTGTGTAGCTTGTCTTTCTGGGACCTTGAATGCTGAAGGGCTAACA  1000
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  GATGCTGTGTAGCTTGTCTTTCTGGGACCTTGAATGCTGA--CGCTAACA  998

seq1  AA-GAGCTGATGGAAGCAAAATCTGACTTAAATTTCCTTTCTTTTTAATG  1049
      || |||||||||| ||| ||||||||| ||||||| ||||||||||||||
seq2  AAGGAGCTGATGG-AGC-AAATCTGAC-TAAATTT-CTTTCTTTTTAATG  1044

seq1  CTCAGCAAAAGTACAGGGCTGGCAGCAGCAACCTAACCTCATT-CTCTCT  1098
      |||||| |||||||| | ||||||||||||  |||  |||||| || |||
seq2  CTCAGC-AAAGTACA-GCCTGGCAGCAGCA--CTA--CTCATTCCTTTCT  1088

seq1  GTATCTAGTGC-AGTAACCAATCCAGTAATGCCTTACACATTGGCAGTTA  1147
      |||| |||||| ||||  ||   |||| ||||  ||| ||||||||| ||
seq2  GTAT-TAGTGCGAGTA--CA--TCAGT-ATGC--TAC-CATTGGCAG-TA  1128

seq1  CAATGGCCCCCAACAGCATGGC  1169
      | ||||   |||||||||||||
seq2  C-ATGG--TCCAACAGCATGGC  1147