BAC Information

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BAC

Clone NameB6Ng01-099L08
Chromosome19 (Build37)
Map Location 33,693,446 - 33,694,565
singlet/doubletsinglet
Overlap geneEG668106
Upstream genePapss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699
Downstream geneEG668112, EG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099L08.bB6Ng01-099L08.g
ACCDH909428DH909429
length1,1791,119
definitionDH909428|Mus musculus domesticus DNA, BAC clone: B6Ng01-099L08, 5' end.DH909429|Mus musculus domesticus DNA, BAC clone: B6Ng01-099L08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagtacctgaaaaaatg
ttcaacatcctcaatcatcagggaaatggaaatcaaaacaaccctgagat
tctatctcacaccattcagaatggctaagatcaaaaattcatgtgacagc
agatgctggcaagaatgtggagaaagaggaacattcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggttgttcctca
gaaaattagacatagtactaccagaggatccagcaatacctctcttgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gttcatggcagccttatttatattagccattagctgtaaagaacccagat
gcccctcaacagaggaatagatacagaaaatgtggtacatttacacaatg
cactactactcagctattaaaaaggatcagtttatgaaattcctaggcaa
atggatggacctggaaggcatcattctgagtgaggtaacccaatcacaaa
agaactcaaacaatatgtcctcactgataagtggatattagcccagaatc
ttagagtaaccaagatataagatacaatttgctaaacaaatgaaactcaa
gaagaacgaagaccaaagtgtggacactttgccccttcttagaatgggga
acaaaacacccatagaaggagttacagagacacagtctgtagctaagacg
aaaggatggaccatctagagactgtcatatccagagatccatcctataat
cagcctacaaacactgacatcattgcatacactagcaagattttgctgaa
aggacccagatatagctgtctcttgtgagacttttcaggggcctagcaag
cacagaagtggatgctcacagtctgctatggatggatcacagggccccaa
tggaggagctagagaaagtaaccaaggaactaaagtgatctgcaacccta
taggtggaataacatatgactaaccagtaccccctgagctggcggtctct
tagctgcatttgtatcagagatggctaatcggccctccgtgtaagagagg
ccgttgtcgtgcaacttatctgctcagtacagtggaagcaggcaaacaag
tgggagtgctggtttggagtggtgtggga
gaattccagaaaattattagagagatctcttaacgaccggagtatttttc
ctcttctagactgtttttttttttccctaatggtaagtcataaacagcat
cattcacagtaagtagtggcggggagatgcaaattgaagagatgagtaaa
ttaagagaaatcttcaggaacaagtttaaatgtctgcaaaaagcaaacat
attctctgtggggggaaaaacaaaactatgcagaaaatattaaggagggg
gaacagcaactacataaaacatgtttatattcatatgtattatttctttc
agctctgggggcatttgcaacaaatcaagaactggctgaaaagattaaac
tcagcattttaatagctccagttcatactgttaaatatgtcaaaggtgct
gggcgccttccagcttatttcactccaacggctttcaaggtttgtgatga
agtcaaagtggtggtaaacttacacttttccaaacaagtttgctaaggaa
gagatctaccagtacagtctggtgctcactcacccacacctcctcccttg
atggctgcagaaagtctctcctcaaagtttggcagtctgcactttgtcca
atgcactttccttaggatggatgtatttttcttttatctatatattttta
atatttattattcttcatattaatttatattttatttttgacaatttcat
acattagaactatatcgacatcattcccattccttcctattctcttccaa
ttcctctgtgcctcttcccctgcaagttcatgactgtctccttcagtatc
accattacacatacatgtacatactaagttcattcagtgttgcttctatg
taggtacataatttttagggatgatcattttgtaccagataatgttttgg
aatatttcctaatgtaattttttttaaacctagttttcgagttttctaat
actgtcttcaaacaggagggcagaactacttattcatttttaagtggtaa
ggatttaatttgttcaaaaattcatagcctattgttatttgtgtcactgg
ctttattacacaaagtattccatattcattctatctagtacaacaggggt
ctagaatatagtttcagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33693446_33694565
seq2: B6Ng01-099L08.g_70_1188 (reverse)

seq1  TTCTGAAACCTTATATTCTAGCACTCTGTATGTACTAG-TAGAATG-ATA  48
      |||||||||  ||||||||||  | |||| |||||||| ||||||| |||
seq2  TTCTGAAAC--TATATTCTAGACCCCTGT-TGTACTAGATAGAATGAATA  47

seq1  TGGGAATACTTTGTGGTAATAAAGCCAGTGACACAAAT-ACAATAGGGCT  97
      | |||||||||||| ||||||||||||||||||||||| |||||| ||||
seq2  T-GGAATACTTTGT-GTAATAAAGCCAGTGACACAAATAACAATA-GGCT  94

seq1  ATGGATTTTTTGACAAATTATATCTTTACCAATTTAAAAATGAATAAGTA  147
      ||| ||||||  |||||||| ||| ||||| | |||||||||||||||||
seq2  ATGAATTTTTGAACAAATTAAATCCTTACC-ACTTAAAAATGAATAAGTA  143

seq1  GTTCTGCC--TCTGTTTGAAGACAGTTATAGAAAACTCGAAAACTAGGTT  195
      ||||||||   |||||||||||||||  ||||||||||||||||||||||
seq2  GTTCTGCCCTCCTGTTTGAAGACAGTATTAGAAAACTCGAAAACTAGGTT  193

seq1  TAAAAAAAATTACATTAGGAAATATTCCAAAACATTATCTGGTACAAAAT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAATTACATTAGGAAATATTCCAAAACATTATCTGGTACAAAAT  243

seq1  GATCATCCCT-AAAATTATGTACCTACATAGAAGCAACACTGAATGAACT  294
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GATCATCCCTAAAAATTATGTACCTACATAGAAGCAACACTGAATGAACT  293

seq1  TAGTATGTACATGTATGTGTAATGGTGATACTGAAGGAGACAGTCATGAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATGTACATGTATGTGTAATGGTGATACTGAAGGAGACAGTCATGAA  343

seq1  CTTGCAGGGGAAGAGGCACAGAGGAATTGGAAGAGAATAGGAAGGAATGG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGGGAAGAGGCACAGAGGAATTGGAAGAGAATAGGAAGGAATGG  393

seq1  GAATGATGTCGATATAGTTCTAATGTATGAAATTGTCAAAAATAAAATAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGTCGATATAGTTCTAATGTATGAAATTGTCAAAAATAAAATAT  443

seq1  AAATTAATATGAAGAATAATAAATATTAAAAATATATAGATAAAAGAAAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATATGAAGAATAATAAATATTAAAAATATATAGATAAAAGAAAA  493

seq1  ATACATCCATCCTAAGGAAAGTGCATTGGACAAAGTGCAGACTGCCAAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCCATCCTAAGGAAAGTGCATTGGACAAAGTGCAGACTGCCAAAC  543

seq1  TTTGAGGAGAGACTTTCTGCAGCCATCAAGGGAGGAGGTGTGGGTGAGTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGAGAGACTTTCTGCAGCCATCAAGGGAGGAGGTGTGGGTGAGTG  593

seq1  AGCACCAGACTGTACTGGTAGATCTCTTCCTTAGCAAACTTGTTTGGAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAGACTGTACTGGTAGATCTCTTCCTTAGCAAACTTGTTTGGAAA  643

seq1  AGTGTAAGTTTACCACCACTTTGACTTCATCACAAACCTTGAAAGCCGTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAGTTTACCACCACTTTGACTTCATCACAAACCTTGAAAGCCGTT  693

seq1  GGAGTGAAATAAGCTGGAAGGCGCCCAGCACCTTTGACATATTTAACAGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAAATAAGCTGGAAGGCGCCCAGCACCTTTGACATATTTAACAGT  743

seq1  ATGAACTGGAGCTATTAAAATGCTGAGTTTAATCTTTTCAGCCAGTTCTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTGGAGCTATTAAAATGCTGAGTTTAATCTTTTCAGCCAGTTCTT  793

seq1  GATTTGTTGCAAATGCCCCCAGAGCTGAAAGAAATAATACATATGAATAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTGCAAATGCCCCCAGAGCTGAAAGAAATAATACATATGAATAT  843

seq1  AAACATGTTTTATGTAGTTGCTGTTCCCCCTCCTTAATATTTTCTGCATA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTTTTATGTAGTTGCTGTTCCCCCTCCTTAATATTTTCTGCATA  893

seq1  GTTTTGTTTTTCCCCCCACAGAGAATATGTTTGCTTTTTGCAGACATTTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTCCCCCCACAGAGAATATGTTTGCTTTTTGCAGACATTTA  943

seq1  AACTTGTTCCTGAAGATTTCTCTTAATTTACTCATCTCTTCAATTTGCAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTCCTGAAGATTTCTCTTAATTTACTCATCTCTTCAATTTGCAT  993

seq1  CTCCCCGCCACTACTTACTGTGAATGATGCTGTTTATGACTTACCATTAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCGCCACTACTTACTGTGAATGATGCTGTTTATGACTTACCATTAG  1043

seq1  GGAAAAAAAAAAACAGTCTAGAAGAGGAAAAATACTCCGGTCGTTAAGAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAAAAACAGTCTAGAAGAGGAAAAATACTCCGGTCGTTAAGAG  1093

seq1  ATCTCTCTAATAATTTTCTGGAATTC  1120
      ||||||||||||||||||||||||||
seq2  ATCTCTCTAATAATTTTCTGGAATTC  1119