BAC Information

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BAC

Clone NameB6Ng01-099M22
Chromosome19 (Build37)
Map Location 13,525,896 - 13,527,103
singlet/doubletsinglet
Overlap genenone
Upstream geneMpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301
Downstream geneOlfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099M22.bB6Ng01-099M22.g
ACCDH909499DH909500
length1,2021,171
definitionDH909499|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M22, 5' end.DH909500|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctgacaaatggagattctctacagatacttaaaagaacagcc
aagttacaatcatacccgaatttatcaagcactaagaaataggggggttg
gggtattgcgttattcatgagaaggtctgctagaacagaacaccctggtg
caagctttcacaaggctcaatggagtagcacaaattgtgactatggtgtg
aaatcattacctgtcattaagctgaccctaggcagggcggttttatcttt
actgtaaatattacctggttcctgtaagtccttttgaagtcattcatttg
ttttgtgtcaggtaacttcaatgtactttgccttctgtgacatcctactg
actttattttctgtattatataaggctggtgttcactttgtaataataca
ttcagattctacaaaatctcctgtgttgcatctgtctgtcatttattcac
tgactccttgtctacctgcaactagagaccagttctatgcagaggaggga
ccaagagggtctgtggcaaataaccagactcagagtcctatgatcactca
gaaggaatccaaatggtgtttacacattcatccagtctctgttgtgattc
ttctcactctcccactcattcattcccttttatagttactcactaattaa
ataatcaatttgtcacttttgttgaacagtactcatagagagcagttact
gtcctcaggaatgcacatttccatctggatatcactttcaataatcacaa
ttaatgcagttccactctgatatcgggttcccttatcaaacattccttct
gtatactgcaaataagaacttcccattgctactgttcttgagtttgatag
gtacatttaactcaagacattatgtagtgatgaagaaaactgtccttctg
atggcacctgttaccatacataatcctgttataaacttccctttgttgaa
tttcagtatttatgtactagaaacaacagaaacaagtgatgggaaaatat
actgtgccaagtaggcattagatgtgggtaaaaaactaattgttatatga
tacgatagattttttaaatgatggtacttgtcacctaatgggtcatgaga
tttgtgaacatgtaaatacttacttcatggatcgagaatcctactgttac
ctaaacaattaagatctgagtacactacatgagattatttgtgtggccgc
ag
gaattcattgttttaaacagctgagtactaccccaatttgtagatgtatc
atattttctatatccatttctcttttgaaggacatttgggctatttccag
tttctggctattatatataagtctgctaggaacatagtggagcatgtatc
ctggctatgtcttggagcatcttttggttatatggccaggaatggtatac
ctgggtgatcaggtaacactatttccattttctaagggaactgacagact
gatttcaagagtggttgtacaagcttgcaatcccaccaacaatggaggag
tggtcctctttctccacctcattgccagcatcagctgtcacctgaggttt
ggatcttagccattctgactggagtgaggtagaatctcagggttgttttg
atttgcatttccctgatgactaaatatgttgaacatttctttaggtgctt
ttcagccatccagaattcctcagttgagaattctttgtttagctctgtac
cccattttcaatagggttatttggttctctggagtctaccttcttgaggt
tttgtatacattggatattagcctactttgggatatcttttgtatacatt
agatattagccttctttgggatatcttttgtatacattagatattagcct
tcttgaggttttttatacattaaatattagccttcttgaggttttgtata
cattagatattagccttctttgggatatgggattggataagaacttttcc
caatctcttagttgctgttttgtcttattgaaagtgtgttttgccttaca
gaagctttgcaattttatgatgtcccatttgttgattcttgatcttagag
cataagtcattggttcagaagttcaggaaattttcccctgtgcctgtgtg
ttcgaggttcttccccacattctcttctatcagtttaagtgtatctggct
ttctatggagatccctgatccacttggactgagattgtacaggtgataaa
atgggatcattgcattcttctcatgctgacctctagtgacagtagcatta
tattaaaaatgctattttccctcactgatggttttagctcttgtcaagtc
atgtgaccacgtgattagttcatcgggattccaatctgtcatgttcaccg
gtgcttcagaatctcgtcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13525896_13527103
seq2: B6Ng01-099M22.b_67_1249

seq1  AGATTCTCTACAGATACTTAAAAGAACAGCCAAGTTACAATCATACCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTCTACAGATACTTAAAAGAACAGCCAAGTTACAATCATACCCGA  50

seq1  ATTTATCAAGCACTAAGAAATAGGGGGGTTGGGGTATTGCGTTATTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAAGCACTAAGAAATAGGGGGGTTGGGGTATTGCGTTATTCATG  100

seq1  AGAAGGTCTGCTAGAACAGAACACCCTGGTGCAAGCTTTCACAAGGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTCTGCTAGAACAGAACACCCTGGTGCAAGCTTTCACAAGGCTCA  150

seq1  ATGGAGTAGCACAAATTGTGACTATGGTGTGAAATCATTACCTGTCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTAGCACAAATTGTGACTATGGTGTGAAATCATTACCTGTCATTA  200

seq1  AGCTGACCCTAGGCAGGGCGGTTTTATCTTTACTGTAAATATTACCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACCCTAGGCAGGGCGGTTTTATCTTTACTGTAAATATTACCTGGT  250

seq1  TCCTGTAAGTCCTTTTGAAGTCATTCATTTGTTTTGTGTCAGGTAACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTAAGTCCTTTTGAAGTCATTCATTTGTTTTGTGTCAGGTAACTTC  300

seq1  AATGTACTTTGCCTTCTGTGACATCCTACTGACTTTATTTTCTGTATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACTTTGCCTTCTGTGACATCCTACTGACTTTATTTTCTGTATTAT  350

seq1  ATAAGGCTGGTGTTCACTTTGTAATAATACATTCAGATTCTACAAAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCTGGTGTTCACTTTGTAATAATACATTCAGATTCTACAAAATCT  400

seq1  CCTGTGTTGCATCTGTCTGTCATTTATTCACTGACTCCTTGTCTACCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTTGCATCTGTCTGTCATTTATTCACTGACTCCTTGTCTACCTGC  450

seq1  AACTAGAGACCAGTTCTATGCAGAGGAGGGACCAAGAGGGTCTGTGGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGACCAGTTCTATGCAGAGGAGGGACCAAGAGGGTCTGTGGCAA  500

seq1  ATAACCAGACTCAGAGTCCTATGATCACTCAGAAGGAATCCAAATGGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAGACTCAGAGTCCTATGATCACTCAGAAGGAATCCAAATGGTGT  550

seq1  TTACACATTCATCCAGTCTCTGTTGTGATTCTTCTCACTCTCCCACTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATTCATCCAGTCTCTGTTGTGATTCTTCTCACTCTCCCACTCAT  600

seq1  TCATTCCCTTTTATAGTTACTCACTAATTAAATAATCAATTTGTCACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCCTTTTATAGTTACTCACTAATTAAATAATCAATTTGTCACTTT  650

seq1  TGTTGAACAGTACTCATAGAGAGCAGTTACTGTCCTCAGGAATGCACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAACAGTACTCATAGAGAGCAGTTACTGTCCTCAGGAATGCACATT  700

seq1  TCCATCTGGATATCACTTTCAATAATCACAATTAATGCAGTTCCACTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGGATATCACTTTCAATAATCACAATTAATGCAGTTCCACTCTG  750

seq1  ATATCGGGTTCCCTTATCAAACATTCCTTCTGTATACTGCAAATAAGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGGGTTCCCTTATCAAACATTCCTTCTGTATACTGCAAATAAGAAC  800

seq1  TTCCCATTGCTACTGTTCTTGAGTTTGATAGGTACATTTAACTCAAGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATTGCTACTGTTCTTGAGTTTGATAGGTACATTTAACTCAAGACA  850

seq1  TTATGTAGTGATGAAGAAAACTGTCCTTCTGATGGCACCTGTTACCATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGTGATGAAGAAAACTGTCCTTCTGATGGCACCTGTTACCATAC  900

seq1  ATAATCCTGTTATAAACTTCCCTTTGTTGAATTTCAGTTATTTATGTACT  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATAATCCTGTTATAAACTTCCCTTTGTTGAATTTCAG-TATTTATGTACT  949

seq1  AGAAACAACAGAAACAAAGTGAT-GGAAAATATAACTGTGCCAAGTAGGC  999
      ||||||||||||||| ||||||| ||||||||| ||||||||||||||||
seq2  AGAAACAACAGAAAC-AAGTGATGGGAAAATAT-ACTGTGCCAAGTAGGC  997

seq1  ATTAGATGTGGTTAAAAAACTATATGTTATATGATAAGGAATAGATATTT  1049
      ||||||||||| ||||||||||  |||||||||||| |  |||||| |||
seq2  ATTAGATGTGGGTAAAAAACTAATTGTTATATGATACG--ATAGAT-TTT  1044

seq1  TAAAATGAATTGTTACTTGTACACTTAATAGGTCATGAGATTTTTGTGAA  1099
      | ||||||  || ||||||| ||| |||| ||||||||||  ||||||||
seq2  TTAAATGA--TGGTACTTGT-CACCTAATGGGTCATGAGA--TTTGTGAA  1089

seq1  CATGTAAAATAC-TACTTCATTGATCAGAGAGTACTTATCCTGTTA-CTT  1147
      ||||| |||||| |||||||| |||| |||| | |   | |||||| || 
seq2  CATGT-AAATACTTACTTCATGGATC-GAGAATCC---TACTGTTACCTA  1134

seq1  AACATTATAGAATTCATGATGTATACTACTTATCATGTAGATTAATTTTT  1197
      |||| |  |||  || ||| ||| ||||     |||| ||||||   |||
seq2  AACAATTAAGA--TC-TGA-GTACACTA-----CATG-AGATTA---TTT  1171

seq1  GT-TGGCCGCAG  1208
      || |||||||||
seq2  GTGTGGCCGCAG  1183