BAC Information

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BAC

Clone NameB6Ng01-099O17
Chromosome19 (Build37)
Map Location 12,072,538 - 12,228,735
singlet/doubletdoublet
Overlap geneGA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76
Upstream gene5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp
Downstream geneOlfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099O17.bB6Ng01-099O17.g
ACCDH909576DH909577
length8711,133
definitionDH909576|Mus musculus domesticus DNA, BAC clone: B6Ng01-099O17, 5' end.DH909577|Mus musculus domesticus DNA, BAC clone: B6Ng01-099O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,227,867 - 12,228,735)(12,072,538 - 12,073,682)
sequence
gaattctgtatcaaacataaaaacaaaactaaatatctgttcttacatac
tttaattgacctgaaaaagcagggcctatcgatcagtgtacagtttcttt
gtatttcactttttgctgacttagatttttcaaaacctactttatttagg
gttcttaaagtcttcaacctcccttctaacccaccaaccagaggtaggaa
gaaaagaaggttaataggaaaaggatgctgtggacctgtttggaagtagt
tccttggggcaattccacattttgttctcaggataccagcagtccagttt
aataccaaacagcaaacacaaatcagcagtggcaacgtaatcgagcagaa
atggcaatgcgctgccaaattggcacaagtcagctagaggccagaatcag
ccagaataaaacaaaaagttctttggcaagcttctctctatgaagtgaag
accaaggaagaccagtgaagagcagcaaagaccagtgaagcattgtacaa
tgtagagtataacaatgcaagagagttctcactgtgagatcttccagaaa
aacatcacatgacacaactgagttgttaagaaaccagaaatttccacttc
aacttaatatttaaaaaaaaaaaacagttctttaatacctctttgaaatt
agcaaacagaataatgggtttcactacggaacttgtaaaaaccgactctt
taaaaaatggatttatattgctgcaataggattatttattaaatagtcat
gataatcatatttacctgagattgcttccaaaaactttctccctatgtga
atcattcattttaggtgttttgtttttctttattttgtgttgttgttgtt
gttgttgatgaatgatgatgg
gaattctgaaatgagagaagaaaggagtcagtggttaagagtattgctct
tgcaggggaccagaattctacttctagcgcatacctgcctggaactacat
acaactcagtggatccaatgttctttgccctcacatgaatgcttccacac
acagttacaaacatgcatacatactaaggaataacaatttggggaattgt
aacacacccttaaccttaatattagggggacaggcagaaggatcagaatt
caaggttatccttggctgtttcagtgagttcaaagccagcctggtttata
taattctggaattccaaaaataaataaattaattaatttaaaaaaaaagg
aagacaagaagaaaaaactttgaaagaaaaccaggtatgctttggtatca
cctgtggtgctatcaaaaaatgttttttaaaatctactattacccagaat
agcctccaatttttctatgtaccccagactgccttcaaattcactatata
gctaacgatgaccttgaattcctggtctttcctcctccaccttcccaatc
ctggaattacaggcatgtatcctggtgacctgttttgagacacaatttta
aacatggctcttctatgtagtctgagaactaagaccaagggaaaccacag
attaaatcatttggccaattttaaaaaaacaaatcaaacaagcaagattt
tatatatatacagaatatactctgcagagtatatatatgtatattctgca
gagaattcttattcaactgaggaactgagggtagactagtatatatgtaa
taactgtactatatagttagtgccattatatcttaaatacgactatgaag
gaatcgacttgctctgaatcccaggcaagcatctggtcaggctaggattt
aagtcaccctttgtcatgtatacaccaagcctatgcagctagtagtggct
tcttccttgcagcacacctaattaccatatatgtggtgccttaagcaggc
tatttatgagctcagtctggaggtggaggagtcttcacaccacatagctg
gcttctttgtcagggtctcatgagagttagaagatgtggctgagttctta
actgagcatattaggagtctctttcattatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12227867_12228735
seq2: B6Ng01-099O17.b_47_916 (reverse)

seq1  CATCATCA-TCATCAACAACAACAACAACAACACAAAATAAAGAAAAACA  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATTCATCAACAACAACAACAACAACACAAAATAAAGAAAAACA  50

seq1  AAACACCTAAAATGAATGATTCACATAGGGAGAAAGTTTTTGGAAGCAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTAAAATGAATGATTCACATAGGGAGAAAGTTTTTGGAAGCAAT  100

seq1  CTCAGGTAAATATGATTATCATGACTATTTAATAAATAATCCTATTGCAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTAAATATGATTATCATGACTATTTAATAAATAATCCTATTGCAG  150

seq1  CAATATAAATCCATTTTTTAAAGAGTCGGTTTTTACAAGTTCCGTAGTGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAAATCCATTTTTTAAAGAGTCGGTTTTTACAAGTTCCGTAGTGA  200

seq1  AACCCATTATTCTGTTTGCTAATTTCAAAGAGGTATTAAAGAACTGTTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATTATTCTGTTTGCTAATTTCAAAGAGGTATTAAAGAACTGTTTT  250

seq1  TTTTTTTTAAATATTAAGTTGAAGTGGAAATTTCTGGTTTCTTAACAACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAAATATTAAGTTGAAGTGGAAATTTCTGGTTTCTTAACAACT  300

seq1  CAGTTGTGTCATGTGATGTTTTTCTGGAAGATCTCACAGTGAGAACTCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTGTCATGTGATGTTTTTCTGGAAGATCTCACAGTGAGAACTCTC  350

seq1  TTGCATTGTTATACTCTACATTGTACAATGCTTCACTGGTCTTTGCTGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTGTTATACTCTACATTGTACAATGCTTCACTGGTCTTTGCTGCT  400

seq1  CTTCACTGGTCTTCCTTGGTCTTCACTTCATAGAGAGAAGCTTGCCAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGGTCTTCCTTGGTCTTCACTTCATAGAGAGAAGCTTGCCAAAG  450

seq1  AACTTTTTGTTTTATTCTGGCTGATTCTGGCCTCTAGCTGACTTGTGCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTGTTTTATTCTGGCTGATTCTGGCCTCTAGCTGACTTGTGCCA  500

seq1  ATTTGGCAGCGCATTGCCATTTCTGCTCGATTACGTTGCCACTGCTGATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCAGCGCATTGCCATTTCTGCTCGATTACGTTGCCACTGCTGATT  550

seq1  TGTGTTTGCTGTTTGGTATTAAACTGGACTGCTGGTATCCTGAGAACAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTGCTGTTTGGTATTAAACTGGACTGCTGGTATCCTGAGAACAAA  600

seq1  ATGTGGAATTGCCCCAAGGAACTACTTCCAAACAGGTCCACAGCATCCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAATTGCCCCAAGGAACTACTTCCAAACAGGTCCACAGCATCCTT  650

seq1  TTCCTATTAACCTTCTTTTCTTCCTACCTCTGGTTGGTGGGTTAGAAGGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATTAACCTTCTTTTCTTCCTACCTCTGGTTGGTGGGTTAGAAGGG  700

seq1  AGGTTGAAGACTTTAAGAACCCTAAATAAAGTAGGTTTTGAAAAATCTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAAGACTTTAAGAACCCTAAATAAAGTAGGTTTTGAAAAATCTAA  750

seq1  GTCAGCAAAAAGTGAAATACAAAGAAACTGTACACTGATCGATAGGCCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAAAAAGTGAAATACAAAGAAACTGTACACTGATCGATAGGCCCT  800

seq1  GCTTTTTCAGGTCAATTAAAGTATGTAAGAACAGATATTTAGTTTTGTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTCAGGTCAATTAAAGTATGTAAGAACAGATATTTAGTTTTGTTT  850

seq1  TTATGTTTGATACAGAATTC  869
      ||||||||||||||||||||
seq2  TTATGTTTGATACAGAATTC  870

seq1: chr19_12072538_12073682
seq2: B6Ng01-099O17.g_68_1200

seq1  GAATTCTGAAATGAGAGAAGAAAGGAGTCAGTGGTTAAGAGTATTGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAATGAGAGAAGAAAGGAGTCAGTGGTTAAGAGTATTGCTCT  50

seq1  TGCAGGGGACCAGAATTCTACTTCTAGCGCATACCTGCCTGGAACTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGGACCAGAATTCTACTTCTAGCGCATACCTGCCTGGAACTACAT  100

seq1  ACAACTCAGTGGATCCAATGTTCTTTGCCCTCACATGAATGCTTCCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCAGTGGATCCAATGTTCTTTGCCCTCACATGAATGCTTCCACAC  150

seq1  ACAGTTACAAACATGCATACATACTAAGGAATAACAATTTGGGGAATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTACAAACATGCATACATACTAAGGAATAACAATTTGGGGAATTGT  200

seq1  AACACACCCTTAACCTTAATATTAGGGGGACAGGCAGAAGGATCAGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACCCTTAACCTTAATATTAGGGGGACAGGCAGAAGGATCAGAATT  250

seq1  CAAGGTTATCCTTGGCTGTTTCAGTGAGTTCAAAGCCAGCCTGGTTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTATCCTTGGCTGTTTCAGTGAGTTCAAAGCCAGCCTGGTTTATA  300

seq1  TAATTCTGGAATTCCAAAAATAAATAAATTAATTAATTTAAAAAAAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTGGAATTCCAAAAATAAATAAATTAATTAATTTAAAAAAAAAGG  350

seq1  AAGACAAGAAGAAAAAACTTTGAAAGAAAACCAGGTATGCTTTGGTATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGAAGAAAAAACTTTGAAAGAAAACCAGGTATGCTTTGGTATCA  400

seq1  CCTGTGGTGCTATCAAAAAATGTTTTTTAAAATCTACTATTACCCAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGTGCTATCAAAAAATGTTTTTTAAAATCTACTATTACCCAGAAT  450

seq1  AGCCTCCAATTTTTCTATGTACCCCAGACTGCCTTCAAATTCACTATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCAATTTTTCTATGTACCCCAGACTGCCTTCAAATTCACTATATA  500

seq1  GCTAACGATGACCTTGAATTCCTGGTCTTTCCTCCTCCACCTTCCCAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACGATGACCTTGAATTCCTGGTCTTTCCTCCTCCACCTTCCCAATC  550

seq1  CTGGAATTACAGGCATGTATCCTGGTGACCTGTTTTGAGACACAATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTACAGGCATGTATCCTGGTGACCTGTTTTGAGACACAATTTTA  600

seq1  AACATGGCTCTTCTATGTAGTCTGAGAACTAAGACCAAGGGAAACCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGCTCTTCTATGTAGTCTGAGAACTAAGACCAAGGGAAACCACAG  650

seq1  ATTAAATCATTTGGCCAATTTTAAAAAAACAAATCAAACAAGCAAGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCATTTGGCCAATTTTAAAAAAACAAATCAAACAAGCAAGATTT  700

seq1  TATATATATACAGAATATACTCTGCAGAGTATATATATGTATATTCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATACAGAATATACTCTGCAGAGTATATATATGTATATTCTGCA  750

seq1  GAGAATTCTTATTCAACTGAGGAACTGAGGGTAGACTAGTATATATGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCTTATTCAACTGAGGAACTGAGGGTAGACTAGTATATATGTAA  800

seq1  TAACTGTACTATATAGTTAGTGCCATTATATCTTAAATACGACTATGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTACTATATAGTTAGTGCCATTATATCTTAAATACGACTATGAAG  850

seq1  GAATCGACTTGCCCTGAATCCCAGGCAAGCATCTGGTCAGGCTAGGATTT  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATCGACTTGCTCTGAATCCCAGGCAAGCATCTGGTCAGGCTAGGATTT  900

seq1  AAGTCACCCTTTGTCATGTATACACCAAGCCTATGCAGCTAGTAGTGGC-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGTCACCCTTTGTCATGTATACACCAAGCCTATGCAGCTAGTAGTGGCT  950

seq1  TCTTCCTTGCAGCACACCTAATTACCATATATGTGGTGCCTTAAAGCAAG  999
      |||||||||||||||||||||||||||||||||||||||||| |||||  
seq2  TCTTCCTTGCAGCACACCTAATTACCATATATGTGGTGCCTT-AAGCA--  997

seq1  GCCTATTTATGAGCTCAGTCCTGGAGGT-GAGGAGTC-TCACACCACATA  1047
      | ||||||||||||||||| |||||||| |||||||| ||||||||||||
seq2  GGCTATTTATGAGCTCAGT-CTGGAGGTGGAGGAGTCTTCACACCACATA  1046

seq1  GCTGGCTTCTTTGTCCAGGGTCTCATGAGAAGGTAAGAAGATGTGGTTGA  1097
      |||||||||||||| |||||||||||||||  || ||||||||||| |||
seq2  GCTGGCTTCTTTGT-CAGGGTCTCATGAGA--GTTAGAAGATGTGGCTGA  1093

seq1  GTTCTTATCTGGAGGCATATTAAGGAAGTCTCCTTTCACATTTATCCT  1145
      ||||||| |||   ||||||||  | ||||| ||||||   |||||||
seq2  GTTCTTAACTG--AGCATATTA--GGAGTCT-CTTTCA---TTATCCT  1133