BAC Information

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BAC

Clone NameB6Ng01-100F08
Chromosome19 (Build37)
Map Location 36,076,133 - 36,077,098
singlet/doubletsinglet
Overlap geneHtr7
Upstream geneLOC383464, LOC100042292, A830019P07Rik
Downstream geneRpp30, Ankrd1, LOC668195, Pcgf5, LOC668201, Hectd2, LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100F08.bB6Ng01-100F08.g
ACCDH909862DH909863
length1,260959
definitionDH909862|Mus musculus domesticus DNA, BAC clone: B6Ng01-100F08, 5' end.DH909863|Mus musculus domesticus DNA, BAC clone: B6Ng01-100F08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaaattctggtattattgtttgcttctagagaagaaaatggat
tatctagggaggagactgctgtttgtattttgtacatttaaaactatgtg
gccatcttaactccccaaatgaaggaaaacccaaatcaaacatgtggttt
gatcaggttcactttttggaggtatgtacttactttagtaatacatacat
aacaaaatccatcattgtaaacattacttaaggggaaattattatttaag
gtaaataaagctggaggaatatggccattttgtctttcagagacagtatc
ctattttctttcagagatgtttaatttctcaaagttaatatgatttccat
ttttagaaagcaacagttgtgaagattccatagagaacatcggcacaaca
atcaaagaaaatggaaaatgcaaaaagatcctaactcaaaacatccagga
aatccaggacacaatgagaagaccaaacctacgcataataggagtggatg
agaatgaagattttcaactcaaaggaccagcaaacatcttcaacaaaatt
attgaagaaaacttcccaaatctaaagaaagagatgcccatgaacataca
agaagcctatagaactccaaatagactggaccagaaaagaaattcctccc
gacacataataatcagaacatcaaatgcacttaataaagatagaatacta
aaagcagtaaggggaaaaggtcaagtaacatataaaggcaagcctatcag
aattacaccagatttttcaccagagactatgaaagccagaagagcctgga
cagatgttatacagacactaagagaacacaaattccagcccaggctacta
tacccggccaaactctcaattaccatagatggagaaaccaaaatattcca
cgacaaactaaattcacccattatctctccacgaatccagcccttcaaag
gataataacagaaaaaaccaatacaatgatgggaccacgccctagaaaac
aggagatattccctcacaaaactaaagaagacagccacagaacagaatgc
tactttaacaacaaaattacagggagcacaattactttcctaactcttaa
attcaatggtctaactccccattaaaagactagatctaacgaactgctac
caaacggaacacttcgtgtgctacggaaaccctctcaggaaagacgagcc
tcctagtgaggcgtgaacattcgagcagttgcgtgaaacgccgtggaatg
accgctttac
gaattccacttacctgggcctggagcaacaatggcaagaattagctccat
ctagtggatagtgcctgacacaggcaagaagaccctgtggagggggtgac
agtacagtcaaggccacagagttcaggataacttgggttaaggggctttg
ccaccactctacagacttctggcagttgctttcacagcctctgcaggctt
actcagaggtgcattctttaatatacataatatatatacacacacacatg
catatatatatatatatatatatgtatatatatatatatatatatactgc
atatagaatatacagataacatatatgtgcatactgcatatagtatataa
atagcatgtatatacatacatgcatatatatatatatatatatatatata
tatgtacactgcacaaagtatatatgataacatatatgtatacttacata
tatactgcatatagtatatataggtaacatacatatacgtacatgcatat
gtatttttatatagcagcagtagggggtggtacaaacattccaggcacac
atctggaagccaggtgacagaagcaccctcaggagccgtttctctcttct
cacctttatgtgggtcctagggatcaaactcaggttgttagagttttcct
tgcaagtacttgaacctgctgagccatctcacaagctcaaatcaaaggct
ggccttcctgagtaggctctaaactaaacaagctttcggtagaggttaat
atctagcttcttgatgtgtaaacaaaatccaagccccaaacagatgactt
gttaaagagtttaaaacatcgggaaagcggaacatttttaacggagctct
gcggggaaccagtgagacttgaaatcttacaggaaagactgctatgttat
acgcaacaggacttacttgaaagcaaataaacaaatcatggggggtgggg
taggggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_36076133_36077098
seq2: B6Ng01-100F08.g_68_1025

seq1  GAATTCCACTTACCTGGGCCTGGAGCAACAATGGCAAGAATTAGCTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTACCTGGGCCTGGAGCAACAATGGCAAGAATTAGCTCCAT  50

seq1  CTAGTGGATAGTGCCTGACACAGGCAAGAAGACCCTGTGGAGGGGGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGGATAGTGCCTGACACAGGCAAGAAGACCCTGTGGAGGGGGTGAC  100

seq1  AGTACAGTCAAGGCCACAGAGTTCAGGATAACTTGGGTTAAGGGGCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGTCAAGGCCACAGAGTTCAGGATAACTTGGGTTAAGGGGCTTTG  150

seq1  CCACCACTCTACAGACTTCTGGCAGTTGCTTTCACAGCCTCTGCAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACTCTACAGACTTCTGGCAGTTGCTTTCACAGCCTCTGCAGGCTT  200

seq1  ACTCAGAGGTGCATTCTTTAATATACATAATATATATACACACACACATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGGTGCATTCTTTAATATACATAATATATATACACACACACATG  250

seq1  CATATATATATATATATATATATGTATATATATATATATATATATACTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATATATATATATGTATATATATATATATATATATACTGC  300

seq1  ATATAGAATATACAGATAACATATATGTGCATACTGCATATAGTATATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAATATACAGATAACATATATGTGCATACTGCATATAGTATATAA  350

seq1  ATAGCATGTATATACATACATGCATATATATATATATATATATATATATA  400
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  ATAGCATGTATATACATACATGC--ATATATATATATATATATATATATA  398

seq1  TATATGTACACTGCACAAAGTATATATGATAACATATATGTATACTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTACACTGCACAAAGTATATATGATAACATATATGTATACTTACA  448

seq1  TATATACTGCATATAGTATATATAGGTAACATACATATACGTACATGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACTGCATATAGTATATATAGGTAACATACATATACGTACATGCAT  498

seq1  ATGTATTTTTATATAGCAGCAGTAGGGGGTGGTACAAACATTCCAGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTTTATATAGCAGCAGTAGGGGGTGGTACAAACATTCCAGGCAC  548

seq1  ACATCTGGAAGCCAGGTGACAGAAGCACCCTCAGGAGCCGTTTCTCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGGAAGCCAGGTGACAGAAGCACCCTCAGGAGCCGTTTCTCTCTT  598

seq1  CTCACCTTTATGTGGGTCCTAGGGATCAAACTCAGGTTGTTAGAG-TTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTCACCTTTATGTGGGTCCTAGGGATCAAACTCAGGTTGTTAGAGTTTTC  648

seq1  CTTGCAAGTACTTGAACCTGCTGAGCCATCTCACAAGCTCAAATCAAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAGTACTTGAACCTGCTGAGCCATCTCACAAGCTCAAATCAAAGG  698

seq1  CTGGCCTTCCTGAGTAGGCTCT-AACT-AACAAGCTTTCGGTAGAGGTTA  747
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  CTGGCCTTCCTGAGTAGGCTCTAAACTAAACAAGCTTTCGGTAGAGGTTA  748

seq1  ATATCTAGCTTCTTGATGTGTAAACAAAATTCCAAGCCCCAAACAGATGA  797
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATATCTAGCTTCTTGATGTGTAAACAAAA-TCCAAGCCCCAAACAGATGA  797

seq1  CTTGTTAAAAGAGTTTTAAAACATCGGGAAAGCGGAACATTTTTAACGGA  847
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  CTTGTT-AAAGAG-TTTAAAACATCGGGAAAGCGGAACATTTTTAACGGA  845

seq1  GCTCTGCGGGGAAACCAGTGAGACTTGAGATTCTTACAGGAAAGACTGCT  897
      ||||||||||| |||||||||||||||| | |||||||||||||||||||
seq2  GCTCTGCGGGG-AACCAGTGAGACTTGA-AATCTTACAGGAAAGACTGCT  893

seq1  ATGTTATACGCAACAGGACTTAACTTGAAAAGCAAATAAAACAAATCATT  947
      ||||||||||||||||||||| ||||| ||||||||| |||||||||| |
seq2  ATGTTATACGCAACAGGACTT-ACTTG-AAAGCAAAT-AAACAAATCA-T  939

seq1  GGGGGGTGGGGTAGGGGTG  966
      |||||||||||||||||||
seq2  GGGGGGTGGGGTAGGGGTG  958