BAC Information

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BAC

Clone NameB6Ng01-101M17
Chromosome19 (Build37)
Map Location 10,511,716 - 10,631,244
singlet/doubletdoublet
Overlap geneSyt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik
Upstream geneLOC100040143, LOC100040152, Stxbp3b, LOC623688, LOC100040178, LOC100040192, 6720475J19Rik, LOC100040203, Incenp, LOC100040215, Fth1, Best1, Rab3il1, Fads3, Fads2, LOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla
Downstream geneTmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101M17.bB6Ng01-101M17.g
ACCDH910869DH910870
length2131,071
definitionDH910869|Mus musculus domesticus DNA, BAC clone: B6Ng01-101M17, 5' end.DH910870|Mus musculus domesticus DNA, BAC clone: B6Ng01-101M17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,631,032 - 10,631,244)(10,511,716 - 10,512,779)
sequence
gaattccatttaagacctgccagaacattgtgacacccacttgaaacccc
tgtactggacgggaagcagaggcaggagaatttgaggcctgcctagccta
cataggagacctgtctagccaaactaaaccagacctgaataaggcagtgg
aaggcacaagcagaagtgaaggaggaaggagagcagaggtggaggtgggg
agtgatggaggga
gaattcttttaccctcctgggagtcccacagtcttaagttccatggtccc
caacccccctccccgaatgcaggttctggaagtaaagttcaggggaagat
gactgctgcgagcttaggatgtgaggacatcaggaagccacatcctgagt
gggcctaggatagagcctgtgggctatgagatcagccagggactaagcag
aggcatcagcaatgggcctaagtgtagttcaggtggtggagtgctcacct
ggcatgaagcactgtttggtccctagcacctaatcaactaggtgtggtgg
cacgtgacccatcagtcaggggatagagacaggggtcacaagttcaagaa
catcttttcaacagagagcattagaggccctatgggctaaatgagcccca
gtcccaaacacacacagtgcaatccccattcagccactggatggagccca
aggtcaagttcaaactaaggtctaagttcaggagccaagacaagtagcca
ggaacccacagttgctggccacaaacctgacttcaagttatgactagcca
ttcagtcattggacttgaggtgagtgacctgaaatctgtgtgctccaagc
caaactttgaacataccagtgcctgcctcagggtagagtaagacacagaa
gaggccaagcacaggggagagttagtgtgtggcaggtggctgacccgtgg
gcgtattttccatcaccaatgtatcttggacactttctcagtggtgcagg
caggtctttgctttcagtggctgtggggagggccttccctgtgacttggg
ggctgggcctgttgagtggagcttgaagtcagagagggtccttacttgct
atgaaagcttgtacgtgtaatttaacctctttgagccagtctcctcagcc
agaggtgagtgacagccgcctggcctggccatgaaaaggtgacgttaaga
gacttcacatggtatgtgcctctgtctgccttatgtcactgtgataactg
tgtggaagagctggggttgcctctccaagagtaatgttgggggcaaagat
ttttcttgagggaatggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_10631032_10631244
seq2: B6Ng01-101M17.b_44_256 (reverse)

seq1  TCCCTCCATCACTCCCCACCTCCACCTCTGCTCTCCTTCCTCCTTCACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCATCACTCCCCACCTCCACCTCTGCTCTCCTTCCTCCTTCACTT  50

seq1  CTGCTTGTGCCTTCCACTGCCTTATTCAGGTCTGGTTTAGTTTGGCTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGTGCCTTCCACTGCCTTATTCAGGTCTGGTTTAGTTTGGCTAGA  100

seq1  CAGGTCTCCTATGTAGGCTAGGCAGGCCTCAAATTCTCCTGCCTCTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTCCTATGTAGGCTAGGCAGGCCTCAAATTCTCCTGCCTCTGCTT  150

seq1  CCCGTCCAGTACAGGGGTTTCAAGTGGGTGTCACAATGTTCTGGCAGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTCCAGTACAGGGGTTTCAAGTGGGTGTCACAATGTTCTGGCAGGTC  200

seq1  TTAAATGGAATTC  213
      |||||||||||||
seq2  TTAAATGGAATTC  213

seq1: chr19_10511716_10512779
seq2: B6Ng01-101M17.g_69_1139

seq1  GAATTCTTTTACCCTCCTGGGAGTCCCACAGTCTTAAGTTCCATGGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACCCTCCTGGGAGTCCCACAGTCTTAAGTTCCATGGTCCC  50

seq1  CAACCCCCCTCCCCGAATGCAGGTTCTGGAAGTAAAGTTCAGGGGAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCCCTCCCCGAATGCAGGTTCTGGAAGTAAAGTTCAGGGGAAGAT  100

seq1  GACTGCTGCGAGCTTAGGATGTGAGGACATCAGGAAGCCACATCCTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTGCGAGCTTAGGATGTGAGGACATCAGGAAGCCACATCCTGAGT  150

seq1  GGGCCTAGGATAGAGCCTGTGGGCTATGAGATCAGCCAGGGACTAAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTAGGATAGAGCCTGTGGGCTATGAGATCAGCCAGGGACTAAGCAG  200

seq1  AGGCATCAGCAATGGGCCTAAGTGTAGTTCAGGTGGTGGAGTGCTCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCAGCAATGGGCCTAAGTGTAGTTCAGGTGGTGGAGTGCTCACCT  250

seq1  GGCATGAAGCACTGTTTGGTCCCTAGCACCTAATCAACTAGGTGTGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAAGCACTGTTTGGTCCCTAGCACCTAATCAACTAGGTGTGGTGG  300

seq1  CACGTGACCCATCAGTCAGGGGATAGAGACAGGGGTCACAAGTTCAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGACCCATCAGTCAGGGGATAGAGACAGGGGTCACAAGTTCAAGAA  350

seq1  CATCTTTTCAACAGAGAGCATTAGAGGCCCTATGGGCTAAATGAGCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTCAACAGAGAGCATTAGAGGCCCTATGGGCTAAATGAGCCCCA  400

seq1  GTCCCAAACACACACAGTGCAATCCCCATTCAGCCACTGGATGGAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAACACACACAGTGCAATCCCCATTCAGCCACTGGATGGAGCCCA  450

seq1  AGGTCAAGTTCAAACTAAGGTCTAAGTTCAGGAGCCAAGACAAGTAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAGTTCAAACTAAGGTCTAAGTTCAGGAGCCAAGACAAGTAGCCA  500

seq1  GGAACCCACAGTTGCTGGCCACAAACCTGACTTCAAGTTATGACTAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCCACAGTTGCTGGCCACAAACCTGACTTCAAGTTATGACTAGCCA  550

seq1  TTCAGTCATTGGACTTGAGGTGAGTGACCTGAAATCTGTGTGCTCCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCATTGGACTTGAGGTGAGTGACCTGAAATCTGTGTGCTCCAAGC  600

seq1  CAAACTTTGAACATACCAGTGCCTGCCTCAGGGTAGAGTAAGACACAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTGAACATACCAGTGCCTGCCTCAGGGTAGAGTAAGACACAGAA  650

seq1  GAGGCCAAGCACAGGGGAGAGTTAGTGTGTGGCAGGTGGCTGACCCGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAAGCACAGGGGAGAGTTAGTGTGTGGCAGGTGGCTGACCCGTGG  700

seq1  GCGTATTTTCCATCACCAATGTATCTTGGACAC-TTCTCAGTGGTGCAGG  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCGTATTTTCCATCACCAATGTATCTTGGACACTTTCTCAGTGGTGCAGG  750

seq1  CAGGTCTTTGCTTTCAGTGGCTGTGGGGAGGGCCTT-CCTGTGACTTGGG  798
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGGTCTTTGCTTTCAGTGGCTGTGGGGAGGGCCTTCCCTGTGACTTGGG  800

seq1  GGCTGGGCCTGTTGAGTGGAGCTTGAAGTCAGAGAGGGTCCTTAC-TGCT  847
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGCTGGGCCTGTTGAGTGGAGCTTGAAGTCAGAGAGGGTCCTTACTTGCT  850

seq1  ATGAAAGCTTGTACGTGTAATTTAACCTCTTTGAGCCAGTCTCCTCAGCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATGAAAGCTTGTACGTGTAATTTAACCTCTTTGAGCCAGTCTCCTCAGCC  900

seq1  AGAGGTGAGTGACAGCCGCCTGGCCTGGCCATGAGAAGGTGACG-TAAGA  946
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  AGAGGTGAGTGACAGCCGCCTGGCCTGGCCATGAAAAGGTGACGTTAAGA  950

seq1  GACTTCACCATGGTATGTGCCTCTGTCTGCCTTATGTCACTGTGAT-ACT  995
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  GACTTCA-CATGGTATGTGCCTCTGTCTGCCTTATGTCACTGTGATAACT  999

seq1  GTGTGGAAGAGCTGGGGTTGCCTCTCCAAGAAGCAGGGTGGGGGCAAAGA  1045
      |||||||||||||||||||||||||||||||   | | ||||||||||||
seq2  GTGTGGAAGAGCTGGGGTTGCCTCTCCAAGAGTAATGTTGGGGGCAAAGA  1049

seq1  TTTT--CTGAGGGAAT-GTGGG  1064
      ||||   ||||||||| |||||
seq2  TTTTTCTTGAGGGAATGGTGGG  1071