BAC Information

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BAC

Clone NameB6Ng01-101P06
Chromosome19 (Build37)
Map Location 14,934,751 - 15,093,531
singlet/doubletdoublet
Overlap geneEG433225
Upstream geneOlfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
Downstream geneEG635497, Pomc-ps1, LOC667482, Psat1, LOC100041424, Cep78, LOC100042048
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101P06.bB6Ng01-101P06.g
ACCDH910983DH910984
length1,127971
definitionDH910983|Mus musculus domesticus DNA, BAC clone: B6Ng01-101P06, 5' end.DH910984|Mus musculus domesticus DNA, BAC clone: B6Ng01-101P06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,092,722 - 15,093,531)(14,934,751 - 14,935,724)
sequence
gaattctcaataatgtactgcaaatgagttcaagagcatattaagatcat
atatcatgatcaagttgctattatcccagggatcaaagatgttcgaagta
tgcaaatcaataaatgtaaaacagacttaaggaccgaagtcacatgacca
tttcaatatatgaaaaagaaggtctttggtaagttcagcatcctttcatg
aataaagttccgaggaaattaggattagaggagcatgtgtcatatgatga
cagccacacaaaacaggcctgtcgcctcaggtggcaacagccacagcaac
aaccctatagactcatatgatgatgggcacagcaacaaacttatagccaa
tattttatactaagtggagaaattgaaagcattttacctaaaatcaagaa
tggaaagagggtgccactccctccactcaaagctattccctgaagtatta
gctgtaacaatacagagaagaaaatggaagtggcatagaaaagaatggaa
gaagccaaaccaatgctatgtgcagacagcatgaccttgagcttaaaaga
cctgaacagccatactagaaattgcttagagctgttagaaagacattttt
agtgaaatagcaggatacataatcaacatttaaatatcagtattttgggt
atatacagatgatgaacttactgataaaagaatcaggaaaaattgtctga
attaaatgtgtccaaaacataaaactatataaaaaatagaaataaactta
ataaaggagttgaaagaccattgcaatgaaaactgtaagacataataaaa
acagaagattataaagttcaactgcctcaaacttataagatatatgttct
gaacaaaaaacaaatgggaattacatatttcacaactgactaaatcatta
aatatttttctatactttttctataatttgtatgttctgctcagtttttc
agccattctttcttggcagtgtcaaagctagaaaggatgtattgatttgg
acagacatgtcccacagctcatgtgcagatattggtcgcattctcatgtc
acgatttggggagttttgaaacttgaggtgagtatagctgagattcggtt
agggcctagcttcttctgcttttactt
gaattcaataagaaaattagagagaagccagttggaaccagtcagtttaa
agaggagtttgagttgagttgaacttgcccatcagagttcagaaacaact
aggaaggatgagctcattcagcagtaagcctttgaaatgacaattatatc
tggtgagtaaaagttacttttacagcataggttttttaatatgatacatt
tcagccacaggccatgtagcaaagtttacctatgccattcctggtattta
cctaagaaaattgccggctgaagagatattacagtggttaaaagacattt
ctacactcacagaagatttgagtttggtaccctgtgcccacatggggcag
ctcagcatatctttcaactctaaggaagcttgtgcctctggtctatccac
acactgtacataattaaaattaaatatcttaaaagaaaattgtccatata
gatagtagcatgctcatttatataaactagtttatgaaatctaaattcaa
aaatatgaaaagagaaaaaaatgtgaagtctcccaatcagcagtaaatat
aacagacatttaaatatatcttacagatatccaaggaagtcttattctgt
gtttgtaagtaaaatacatacggatgtcagctagatagttccccaaaaga
tagctgctttctttctcttgtgttagttgttggaatataggatattatag
gtgtatggatctttattaatctttttaaacagctgagtagaagaaaaact
taggtcaaatattcataaaacacgtaatactctttacagaagcctatctt
ttggacaattccattagaaacatcatagtgggatagcacaggacagtatc
atctctgcttcttgcttgctgtgtgacctggggcaacttaacccttttga
gatttggagtgtcccatcgggattccttgctacagagcctccttatgcga
ctttttggatattcatcaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15092722_15093531
seq2: B6Ng01-101P06.b_392_1173 (reverse)

seq1  AAGTAAAAAAGACAGGAAGAAGGCTAGGCTCCTGATAACCGAATTCCTCA  50
      ||||||||    || |||||| ||||||| |    |||||||||  ||| 
seq2  AAGTAAAA---GCA-GAAGAA-GCTAGGCCC----TAACCGAAT--CTC-  38

seq1  AGCTATACCTCACCTTTCAAAGGTTTCAAAAACTCCCCCAAATCGTGACA  100
      ||||||| ||||||  ||||  ||||| |||||| |||||||||||||||
seq2  AGCTATA-CTCACC--TCAA--GTTTC-AAAACT-CCCCAAATCGTGACA  81

seq1  TGAG-ATGCGGACCAAATATTCTTGCACATGAGCTTGTGGGGAACATGTT  149
      |||| |||| |||| |||||   ||||||||||| ||||||  ||||| |
seq2  TGAGAATGC-GACC-AATAT--CTGCACATGAGC-TGTGGG--ACATG-T  123

seq1  CTGTCCAAATCAATACCTTCCTTTCTAGCTTTGACACTGCCAAGAAAGAA  199
      ||||||||||||||| | ||||||||||||||||||||||||||||||||
seq2  CTGTCCAAATCAATA-CATCCTTTCTAGCTTTGACACTGCCAAGAAAGAA  172

seq1  TGGCTGAAAAACTGAGCAGAACATACAAAATTATAGAAAAAGTATAG-AA  248
      |||||||||||||||||||||||||| |||||||||||||||||||| ||
seq2  TGGCTGAAAAACTGAGCAGAACATAC-AAATTATAGAAAAAGTATAGAAA  221

seq1  AATATTTAATGATTTAGTCAGTTGTGAAATATGTAATTCCCATTTGTTTT  298
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATATTTAATGATTTAGTCAGTTGTGAAATATGTAATTCCCATTTG-TTT  270

seq1  TTTGTTCAGAACATATATCTTATAAGTTTGAGGCAGTTGAACTTTATAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAGAACATATATCTTATAAGTTTGAGGCAGTTGAACTTTATAAT  320

seq1  CTTCTGTTTTTATTATGTCTTACAGTTTTCATTGCAATGGTCTTTCAACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTTTTATTATGTCTTACAGTTTTCATTGCAATGGTCTTTCAACT  370

seq1  CCTTTATTAAGTTTATTTCTATTTTTTATATAGTTTTATGTTTTGGACAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTAAGTTTATTTCTATTTTTTATATAGTTTTATGTTTTGGACAC  420

seq1  ATTTAATTCAGACAATTTTTCCTGATTCTTTTATCAGTAAGTTCATCATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTCAGACAATTTTTCCTGATTCTTTTATCAGTAAGTTCATCATC  470

seq1  TGTATATACCCAAAATACTGATATTTAAATGTTGATTATGTATCCTGCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATACCCAAAATACTGATATTTAAATGTTGATTATGTATCCTGCTA  520

seq1  TTTCACTAAAAATGTCTTTCTAACAGCTCTAAGCAATTTCTAGTATGGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTAAAAATGTCTTTCTAACAGCTCTAAGCAATTTCTAGTATGGCT  570

seq1  GTTCAGGTCTTTTAAGCTCAAGGTCATGCTGTCTGCACATAGCATTGGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGTCTTTTAAGCTCAAGGTCATGCTGTCTGCACATAGCATTGGTT  620

seq1  TGGCTTCTTCCATTCTTTTCTATGCCACTTCCATTTTCTTCTCTGTATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTTCCATTCTTTTCTATGCCACTTCCATTTTCTTCTCTGTATTG  670

seq1  TTACAGCTAATACTTCAGGGAATAGCTTTGAGTGGAGGGAGTGGCACCCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTAATACTTCAGGGAATAGCTTTGAGTGGAGGGAGTGGCACCCT  720

seq1  CTTTCCATTCTTGATTTTAGGTAAAATGCTTTCAATTTCTCCACTTAGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCATTCTTGATTTTAGGTAAAATGCTTTCAATTTCTCCACTTAGTA  770

seq1  TAAAATATTGGC  810
      ||||||||||||
seq2  TAAAATATTGGC  782

seq1: chr19_14934751_14935724
seq2: B6Ng01-101P06.g_69_1039

seq1  GAATTCAATAAGAAAATTAGAGAGAAGCCAGTTGGAACCAGTCAGTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAGAAAATTAGAGAGAAGCCAGTTGGAACCAGTCAGTTTAA  50

seq1  AGAGGAGTTTGAGTTGAGTTGAACTTGCCCATCAGAGTTCAGAAACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGTTTGAGTTGAGTTGAACTTGCCCATCAGAGTTCAGAAACAACT  100

seq1  AGGAAGGATGAGCTCATTCAGCAGTAAGCCTTTGAAATGACAATTATATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGATGAGCTCATTCAGCAGTAAGCCTTTGAAATGACAATTATATC  150

seq1  TGGTGAGTAAAAGTTACTTTTACAGCATAGGTTTTTTAATATGATACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGTAAAAGTTACTTTTACAGCATAGGTTTTTTAATATGATACATT  200

seq1  TCAGCCACAGGCCATGTAGCAAAGTTTACCTATGCCATTCCTGGTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCACAGGCCATGTAGCAAAGTTTACCTATGCCATTCCTGGTATTTA  250

seq1  CCTAAGAAAATTGCCGGCTGAAGAGATATTACAGTGGTTAAAAGACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGAAAATTGCCGGCTGAAGAGATATTACAGTGGTTAAAAGACATTT  300

seq1  CTACACTCACAGAAGATTTGAGTTTGGTACCCTGTGCCCACATGGGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTCACAGAAGATTTGAGTTTGGTACCCTGTGCCCACATGGGGCAG  350

seq1  CTCAGCATATCTTTCAACTCTAAGGAAGCTTGTGCCTCTGGTCTATCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCATATCTTTCAACTCTAAGGAAGCTTGTGCCTCTGGTCTATCCAC  400

seq1  ACACTGTACATAATTAAAATTAAATATCTTAAAAGAAAATTGTCCATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTACATAATTAAAATTAAATATCTTAAAAGAAAATTGTCCATATA  450

seq1  GATAGTAGCATGCTCATTTATATAAACTAGTTTATGAAATCTAAATTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAGCATGCTCATTTATATAAACTAGTTTATGAAATCTAAATTCAA  500

seq1  AAATATGAAAAGAGAAAAAAATGTGAAGTCTCCCAATCAGCAGTAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAAAAGAGAAAAAAATGTGAAGTCTCCCAATCAGCAGTAAATAT  550

seq1  AACAGACATTTAAATATATCTTACAGATATCCAAGGAAGTCTTATTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACATTTAAATATATCTTACAGATATCCAAGGAAGTCTTATTCTGT  600

seq1  GTTTGTAAGTAAAATACATACGGATGTCAGCTAGATAGTTCCCCAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTAAGTAAAATACATACGGATGTCAGCTAGATAGTTCCCCAAAAGA  650

seq1  TAGCTGCTTTCTTTCTCTTGTGTTAGTTGTTGGAATATAGGATATTATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTTTCTTTCTCTTGTGTTAGTTGTTGGAATATAGGATATTATAG  700

seq1  GTGTATGGATCTTTATTAATC-TTTTAAACAGCTGAGTAGAAGAAAAACT  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTGTATGGATCTTTATTAATCTTTTTAAACAGCTGAGTAGAAGAAAAACT  750

seq1  TAGGTCAAATATTCATAAAACACGTAATACCATTTACAGAAGCCTATCTT  799
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  TAGGTCAAATATTCATAAAACACGTAATACTCTTTACAGAAGCCTATCTT  800

seq1  TTGGACAATTCCATTAGAAACATCATAGTGGGATAGCACAGGACAAGATG  849
      |||||||||||||||||||||||||||||||||||||||||||||  || 
seq2  TTGGACAATTCCATTAGAAACATCATAGTGGGATAGCACAGGACAGTAT-  849

seq1  CATCTCTGCTACTTGCTGGCTGTGTGACCTGGGGCAACTTAA-CCTTTTG  898
      |||||||||| |||||| |||||||||||||||||||||||| |||||||
seq2  CATCTCTGCTTCTTGCTTGCTGTGTGACCTGGGGCAACTTAACCCTTTTG  899

seq1  AGATTT-GAGTGTTCTCATCTGTGAATCCTTGCTAACAGAGCCTCCTTAT  947
      |||||| ||||| || |||| | || |||||||| |||||||||||||||
seq2  AGATTTGGAGTG-TCCCATC-GGGATTCCTTGCT-ACAGAGCCTCCTTAT  946

seq1  AGCGACCTTTTTGAGATTTCATCAAAA  974
       ||||| |||| || | ||||||||||
seq2  -GCGACTTTTTGGATA-TTCATCAAAA  971