BAC Information

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BAC

Clone NameB6Ng01-102B08
Chromosome19 (Build37)
Map Location 52,360,402 - 52,361,587
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936, Ins1
Downstream geneLOC100043450, Xpnpep1, LOC668545, LOC674277, Add3, 1700001K23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102B08.bB6Ng01-102B08.g
ACCDH911074DH911075
length1,1631,138
definitionDH911074|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B08, 5' end.DH911075|Mus musculus domesticus DNA, BAC clone: B6Ng01-102B08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcaggactgtactgggaggttctgccaatgacccatccttctt
tgaccaaaagctttgttgatcaaggaatcacttttttgttccttcttcat
atccacgagcccttgatcaaagaagaatccacaataaagaaaatcttgat
accacctggacacttgagagaattctaagataacaagaatgagtcaatca
tcagaacatacattttaaatataagataaaattacattgtatgggctgag
cagattattattatgcatttatgtcagcagttaaaggaatagagtccatg
tatttgaaagaaaataaaggagtggtttgtaggaaggattgaaagaagaa
ggggaaggtaggaaaccatatcactatattttaatttcaaaagatagaga
actaaaaaagaatttggcttataaaaatatatcaaaactggcttatggtg
aagttctggagtggaaatttctggtttctcagttgtgtcaagtgatattt
ttttttgaaaactgtcttataagagaatatttttgctgaagcaggtaggt
ggggggatgttttgctgagaacagacgtgtggaatttttctagaagctac
attgaaagaggacatgtaacgttttgctagagtagatgcttgagagaaca
cgtgatatttggaaagggtataaataaaacccaacagacaggggatgaca
attggtttgccttgccacagttttgtttttaacattatttgacatgactt
catagaaagaaatgcaccaaagaacttctggtggtattcctgtagtttct
caccgcttccttggactaaggctggttggcagagcctcgaggtttcttct
ggattgaactgccaccattattgatttgtgaatggcatttgttaaaggat
ccagatactgcttctgattcatgggaattgaactgctgacatcctgataa
tgcagattggatttggtcaaagacctgtttctaaacagttcacatcctcc
tttccccttagctttctaatgcctctgtgatggtgagctagatgagttaa
acatttaggtgcacttattaagcaggttgaaaaaatgtctacaagtttat
ctttcagatccactagccaatctctttcgagtgacatgagcaatatctct
tacagggttgttt
gaattctctgtagggatgttgtgttttcacataaggggaaggcagtagta
caatgtatattggtgcacagtctccttgacaaggactttgtaaggacaga
gaaattctattggcttaatcaggtctattggggcctctccttctcttaat
gccatcatattgagaacacttgaattttggaggagacacattcctcgtgc
cccttccccaaatgggcttacggaacataaaaagtaatgacgtctgttta
atacatgagatagctgtcatttgtgaaagtcttttatttctaccttcttt
tatgtatgttgcagagtcacttggactggataaatcacaaattactccta
caagatcttccgactcctcagcttctttcagctttccctaatttaacaac
aggggtcagctgcttctgtccattggttgggtgcaatccacagatccaaa
gaagttaagtaacaggagggcccaaggaatgatgcttgaatatcccccaa
aagggaaataaaatagacatgaagtgtggatggaaagagagaactgggtg
tgagatagagtgaggaggggaacaaaagaagtaggaatcaggtgtggaga
aatcagggccaggggttgagagggaatatagagagaagggaaatagatgg
ggatgcatctcccaggaaagccagagacctgtggtgggggagacacctgg
gaggatatgggggtgaccatacctgagactcctagaagtggcagatatgg
agcccaaagtggccagctttctgtggcccggaaacacttccagtggagta
agaaagacacccctttcaataaaataacctacccaaatttgtcctgcttg
caagatatgtagagacaaagatagagtgagattgagggaaaggacaaaca
atgggtccactccaggactattaataatactttgttatgcttgcagacag
gcacctagcataactgtcatctgagagactcattccagcagctgataaga
aaagatgtaaagacccacagccacattaagctgactcagaagtcttgtga
aaaattaacggaaagaatgaggacactgtaggttatgacactttagaaga
ctcagagcccgtacctgggtcatgggggatcacgatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52360402_52361587
seq2: B6Ng01-102B08.b_48_1210

seq1  GAATTCAGCAGGACTGTACTGGGAGGTTCTGCCAATGACCCATCCTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGGACTGTACTGGGAGGTTCTGCCAATGACCCATCCTTCTT  50

seq1  TGACCAAAAGCTTTGTTGATCAAGGAATCACTTTTTTGTTCCTTCTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAAAAGCTTTGTTGATCAAGGAATCACTTTTTTGTTCCTTCTTCAT  100

seq1  ATCCACGAGCCCTTGATCAAAGAAGAATCCACAATAAAGAAAATCTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACGAGCCCTTGATCAAAGAAGAATCCACAATAAAGAAAATCTTGAT  150

seq1  ACCACCTGGACACTTGAGAGAATTCTAAGATAACAAGAATGAGTCAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTGGACACTTGAGAGAATTCTAAGATAACAAGAATGAGTCAATCA  200

seq1  TCAGAACATACATTTTAAATATAAGATAAAATTACATTGTATGGGCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACATACATTTTAAATATAAGATAAAATTACATTGTATGGGCTGAG  250

seq1  CAGATTATTATTATGCATTTATGTCAGCAGTTAAAGGAATAGAGTCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATTATTATGCATTTATGTCAGCAGTTAAAGGAATAGAGTCCATG  300

seq1  TATTTGAAAGAAAATAAAGGAGTGGTTTGTAGGAAGGATTGAAAGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAAGAAAATAAAGGAGTGGTTTGTAGGAAGGATTGAAAGAAGAA  350

seq1  GGGGAAGGTAGGAAACCATATCACTATATTTTAATTTCAAAAGATAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGTAGGAAACCATATCACTATATTTTAATTTCAAAAGATAGAGA  400

seq1  ACTAAAAAAGAATTTGGCTTATAAAAATATATCAAAACTGGCTTATGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAAGAATTTGGCTTATAAAAATATATCAAAACTGGCTTATGGTG  450

seq1  AAGTTCTGGAGTGGAAATTTCTGGTTTCTCAGTTGTGTCAAGTGATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGGAGTGGAAATTTCTGGTTTCTCAGTTGTGTCAAGTGATATTT  500

seq1  TTTTTTGAAAACTGTCTTATAAGAGAATATTTTTGCTGAAGCAGGTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAAAACTGTCTTATAAGAGAATATTTTTGCTGAAGCAGGTAGGT  550

seq1  GGGGGGATGTTTTGCTGAGAACAGACGTGTGGAATTTTTCTAGAAGCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGATGTTTTGCTGAGAACAGACGTGTGGAATTTTTCTAGAAGCTAC  600

seq1  ATTGAAAGAGGACATGTAACGTTTTGCTAGAGTAGATGCTTGAGAGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGAGGACATGTAACGTTTTGCTAGAGTAGATGCTTGAGAGAACA  650

seq1  CGTGATATTTGGAAAGGGTATAAATAAAACCCAACAGACAGGGGATGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATATTTGGAAAGGGTATAAATAAAACCCAACAGACAGGGGATGACA  700

seq1  ATTGGTTTGCCTTGCCACAGTTTTGTTTTTAACATTATTTGACATGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTGCCTTGCCACAGTTTTGTTTTTAACATTATTTGACATGACTT  750

seq1  CATAGAAAGAAATGCACCAAAGAACTTCTGGTGGTATTCCTGTAGTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAAGAAATGCACCAAAGAACTTCTGGTGGTATTCCTGTAGTTTCT  800

seq1  CACCGCTTCCTTGGACTAAGGCTGGTTGGCAGAGCCTCGAGGTTTCTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGCTTCCTTGGACTAAGGCTGGTTGGCAGAGCCTCGAGGTTTCTTCT  850

seq1  GGATTGAACTGCCACCATTATTGATTTGTGAATGGCATTTGTTAAAGGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAACTGCCACCATTATTGATTTGTGAATGGCATTTGTTAAAGGAT  900

seq1  CCAGATACTGCTTCTGATTCATGGGAATTGAACTGCTGACATCCTGATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATACTGCTTCTGATTCATGGGAATTGAACTGCTGACATCCTGATAA  950

seq1  TGCAGATTGGATTTGGTCCAAAGACCTGTTTCTAAACAGGTTCACATCCT  1000
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  TGCAGATTGGATTTGGT-CAAAGACCTGTTTCTAAACA-GTTCACATCCT  998

seq1  CCTTTTCCCCCTTAGCCTTTCTAATGCCTCTGGTGGATGGTGAGCTAGAA  1050
      |||||  |||||||| ||||||||||||||||   |||||||||||||| 
seq2  CCTTT--CCCCTTAG-CTTTCTAATGCCTCTG--TGATGGTGAGCTAGAT  1043

seq1  GGGAGGTTAAAACATTTAGGTGCACTTATTAAAGCAGGGTTTGAAAAATA  1100
      | |    | ||||||||||||||||||||| |||||||  |||||||| |
seq2  GAG----TTAAACATTTAGGTGCACTTATT-AAGCAGG--TTGAAAAA-A  1085

seq1  TGTCTACAAGGTTTAATCTTCAAGATCCCACTAGCAAATTCCTTCCCTGT  1150
      ||||||||||  || |||||  |||| |||||||| ||     || || |
seq2  TGTCTACAAG--TTTATCTTTCAGAT-CCACTAGCCAA-----TCTCTTT  1127

seq1  CAGATGACATGAGCAATATCTCCTACAGGGTTGTTT  1186
      |   |||||||||||||||||| |||||||||||||
seq2  CGAGTGACATGAGCAATATCTCTTACAGGGTTGTTT  1163